RNA–Protein interactions for RNA: ENST00000638151.1

SCN2A-217, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 2,832 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-217ENST00000638151 NISCHQ9Y2I1 1504 aa17.29■□□□□ 0.36
SCN2A-217ENST00000638151 SHROOM4Q9ULL8 1493 aa15.14■□□□□ 0.01
SCN2A-217ENST00000638151 SUPT5HO00267 1087 aaKnown RBP14.83□□□□□ -0.04
SCN2A-217ENST00000638151 DCAF8L2P0C7V8 631 aa14.83□□□□□ -0.04
SCN2A-217ENST00000638151 ZCCHC6Q5VYS8 1495 aaKnown RBP14.58□□□□□ -0.07
SCN2A-217ENST00000638151 CCDC180Q9P1Z9 1646 aa14.48□□□□□ -0.09
SCN2A-217ENST00000638151 CHIC1Q5VXU3 224 aa14.23□□□□□ -0.13
SCN2A-217ENST00000638151 MYO15BQ96JP2 1530 aa14.2□□□□□ -0.14
SCN2A-217ENST00000638151 LOC105371045A0A1W2PR82 267 aa14.01□□□□□ -0.17
SCN2A-217ENST00000638151 DCAF1Q9Y4B6 1507 aa13.98□□□□□ -0.17
SCN2A-217ENST00000638151 HRCP23327 699 aa13.96□□□□□ -0.17
SCN2A-217ENST00000638151 PELP1Q8IZL8 1130 aaKnown RBP13.94□□□□□ -0.18
SCN2A-217ENST00000638151 PCGF6Q9BYE7 350 aa13.91□□□□□ -0.18
SCN2A-217ENST00000638151 SCRIBQ14160 1630 aa13.91□□□□□ -0.18
SCN2A-217ENST00000638151 ABCC9O60706 1549 aa13.88□□□□□ -0.19
SCN2A-217ENST00000638151 EHMT2Q96KQ7 1210 aa13.83□□□□□ -0.2
SCN2A-217ENST00000638151 RSF1Q96T23 1441 aaPredicted RBP13.77□□□□□ -0.2
SCN2A-217ENST00000638151 FAM9AQ8IZU1 332 aaPredicted RBP13.77□□□□□ -0.21
SCN2A-217ENST00000638151 PPARGC1BQ86YN6 1023 aaKnown RBP13.7□□□□□ -0.22
SCN2A-217ENST00000638151 CECR2Q9BXF3 1484 aa13.68□□□□□ -0.22
SCN2A-217ENST00000638151 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
SCN2A-217ENST00000638151 RB1CC1Q8TDY2 1594 aa13.63□□□□□ -0.23
SCN2A-217ENST00000638151 MROH2BQ7Z745 1585 aa13.55□□□□□ -0.24
SCN2A-217ENST00000638151 MYT1Q01538 1121 aa13.5□□□□□ -0.25
SCN2A-217ENST00000638151 NACADO15069 1562 aa13.49□□□□□ -0.25
SCN2A-217ENST00000638151 WIZO95785 1651 aa13.47□□□□□ -0.25
SCN2A-217ENST00000638151 TRIM26Q12899 539 aaPredicted RBP13.44□□□□□ -0.26
SCN2A-217ENST00000638151 PABPN1Q86U42 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
SCN2A-217ENST00000638151 TTBK1Q5TCY1 1321 aaPredicted RBP13.32□□□□□ -0.28
SCN2A-217ENST00000638151 SCAF1Q9H7N4 1312 aaKnown RBP13.32□□□□□ -0.28
SCN2A-217ENST00000638151 ABCC8Q09428 1581 aa13.24□□□□□ -0.29
SCN2A-217ENST00000638151 BAZ1AQ9NRL2 1556 aaPredicted RBP13.23□□□□□ -0.29
SCN2A-217ENST00000638151 CCDC88BA6NC98 1476 aa13.21□□□□□ -0.3
SCN2A-217ENST00000638151 UNC13AQ9UPW8 1703 aa13.16□□□□□ -0.3
SCN2A-217ENST00000638151 SMARCA4P51532 1647 aa13.15□□□□□ -0.3
SCN2A-217ENST00000638151 SOGA1O94964 1423 aa13.14□□□□□ -0.31
SCN2A-217ENST00000638151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.13□□□□□ -0.31
SCN2A-217ENST00000638151 RUSC2Q8N2Y8 1516 aa13.11□□□□□ -0.31
SCN2A-217ENST00000638151 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
SCN2A-217ENST00000638151 TOP2AP11388 1531 aaKnown RBP13.11□□□□□ -0.31
SCN2A-217ENST00000638151 SMARCA2P51531 1590 aa13.1□□□□□ -0.31
SCN2A-217ENST00000638151 ZEB1P37275 1124 aaPredicted RBP13.08□□□□□ -0.32
SCN2A-217ENST00000638151 UBTFP17480 764 aaKnown RBP13.07□□□□□ -0.32
SCN2A-217ENST00000638151 RANGAP1P46060 587 aaPredicted RBP13.06□□□□□ -0.32
SCN2A-217ENST00000638151 BICRAQ9NZM4 1560 aa13.05□□□□□ -0.32
SCN2A-217ENST00000638151 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
SCN2A-217ENST00000638151 CCER1Q8TC90 406 aaPredicted RBP12.99□□□□□ -0.33
SCN2A-217ENST00000638151 CEP162Q5TB80 1403 aa12.97□□□□□ -0.33
SCN2A-217ENST00000638151 ACIN1Q9UKV3 1341 aaKnown RBP12.95□□□□□ -0.34
SCN2A-217ENST00000638151 WRNQ14191 1432 aaPredicted RBP eCLIP12.92□□□□□ -0.34
SCN2A-217ENST00000638151 ATAD2BQ9ULI0 1458 aa12.89□□□□□ -0.35
SCN2A-217ENST00000638151 TNIKQ9UKE5 1360 aa12.87□□□□□ -0.35
SCN2A-217ENST00000638151 NEUROD1Q13562 356 aa12.86□□□□□ -0.35
SCN2A-217ENST00000638151 SYNJ1O43426 1573 aa12.86□□□□□ -0.35
SCN2A-217ENST00000638151 BAZ1BQ9UIG0 1483 aaKnown RBP12.85□□□□□ -0.35
SCN2A-217ENST00000638151 HNRNPUL2Q1KMD3 747 aaKnown RBP12.84□□□□□ -0.35
SCN2A-217ENST00000638151 GTF3C3Q9Y5Q9 886 aa12.83□□□□□ -0.36
SCN2A-217ENST00000638151 CENPBP07199 599 aaPredicted RBP12.79□□□□□ -0.36
SCN2A-217ENST00000638151 GOLGA3Q08378 1498 aa12.78□□□□□ -0.36
SCN2A-217ENST00000638151 PEG3Q9GZU2 1588 aa12.78□□□□□ -0.36
SCN2A-217ENST00000638151 RAPGEF2Q9Y4G8 1499 aa12.77□□□□□ -0.37
SCN2A-217ENST00000638151 EEA1Q15075 1411 aa12.75□□□□□ -0.37
SCN2A-217ENST00000638151 CLIP1P30622 1438 aa12.73□□□□□ -0.37
SCN2A-217ENST00000638151 CEP164Q9UPV0 1460 aa12.7□□□□□ -0.38
SCN2A-217ENST00000638151 DIEXFQ68CQ4 756 aaKnown RBP12.69□□□□□ -0.38
SCN2A-217ENST00000638151 APLP2Q06481 763 aa12.66□□□□□ -0.38
SCN2A-217ENST00000638151 KANK4Q5T7N3 995 aaPredicted RBP12.63□□□□□ -0.39
SCN2A-217ENST00000638151 VPS8Q8N3P4 1428 aa12.61□□□□□ -0.39
SCN2A-217ENST00000638151 KIF21BO75037 1637 aa12.6□□□□□ -0.39
SCN2A-217ENST00000638151 TOP2BQ02880 1626 aa12.59□□□□□ -0.39
SCN2A-217ENST00000638151 CUX1P39880 1505 aa12.58□□□□□ -0.4
SCN2A-217ENST00000638151 ITGAEP38570 1179 aa12.58□□□□□ -0.4
SCN2A-217ENST00000638151 NCAPD3P42695 1498 aa12.57□□□□□ -0.4
SCN2A-217ENST00000638151 YTHDC1Q96MU7 727 aaKnown RBP12.57□□□□□ -0.4
SCN2A-217ENST00000638151 ZNF316A6NFI3 1004 aaPredicted RBP12.53□□□□□ -0.4
SCN2A-217ENST00000638151 P3H3Q8IVL6 736 aa12.52□□□□□ -0.4
SCN2A-217ENST00000638151 PRXQ9BXM0 1461 aa12.52□□□□□ -0.41
SCN2A-217ENST00000638151 ARAP1Q96P48 1450 aa12.52□□□□□ -0.41
SCN2A-217ENST00000638151 BCL11AQ9H165 835 aa12.51□□□□□ -0.41
SCN2A-217ENST00000638151 CFTRP13569 1480 aa12.5□□□□□ -0.41
SCN2A-217ENST00000638151 KIF27Q86VH2 1401 aa12.49□□□□□ -0.41
SCN2A-217ENST00000638151 MIER1Q8N108 512 aa12.48□□□□□ -0.41
SCN2A-217ENST00000638151 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
SCN2A-217ENST00000638151 ATP1B4Q9UN42 357 aaPredicted RBP12.48□□□□□ -0.41
SCN2A-217ENST00000638151 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
SCN2A-217ENST00000638151 CUX2O14529 1486 aa12.45□□□□□ -0.42
SCN2A-217ENST00000638151 DNAJC5BQ9UF47 199 aa12.45□□□□□ -0.42
SCN2A-217ENST00000638151 IGF1RP08069 1367 aa12.44□□□□□ -0.42
SCN2A-217ENST00000638151 CADPSQ9ULU8 1353 aa12.42□□□□□ -0.42
SCN2A-217ENST00000638151 ARHGAP35Q9NRY4 1499 aa12.41□□□□□ -0.42
SCN2A-217ENST00000638151 ERICH3Q5RHP9 1530 aa12.39□□□□□ -0.43
SCN2A-217ENST00000638151 DHX57Q6P158 1386 aaKnown RBP12.38□□□□□ -0.43
SCN2A-217ENST00000638151 NESP48681 1621 aa12.38□□□□□ -0.43
SCN2A-217ENST00000638151 CARMIL1Q5VZK9 1371 aa12.38□□□□□ -0.43
SCN2A-217ENST00000638151 FGD5Q6ZNL6 1462 aa12.37□□□□□ -0.43
SCN2A-217ENST00000638151 RAD54L2Q9Y4B4 1467 aa12.36□□□□□ -0.43
SCN2A-217ENST00000638151 ANP32EQ9BTT0 268 aa12.36□□□□□ -0.43
SCN2A-217ENST00000638151 CC2D2AQ9P2K1 1620 aa12.35□□□□□ -0.43
SCN2A-217ENST00000638151 FAM50AQ14320 339 aaKnown RBP12.33□□□□□ -0.43
SCN2A-217ENST00000638151 CCNB3Q8WWL7 1395 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms