RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 NISCHQ9Y2I1 1504 aa15.05■□□□□ -0
CACNA1D-220ENST00000636999 DCAF8L2P0C7V8 631 aa14.04□□□□□ -0.16
CACNA1D-220ENST00000636999 SHROOM4Q9ULL8 1493 aa13.25□□□□□ -0.29
CACNA1D-220ENST00000636999 SUPT5HO00267 1087 aaKnown RBP13.12□□□□□ -0.31
CACNA1D-220ENST00000636999 ABCC9O60706 1549 aa12.85□□□□□ -0.35
CACNA1D-220ENST00000636999 CCDC180Q9P1Z9 1646 aa12.76□□□□□ -0.37
CACNA1D-220ENST00000636999 ZCCHC6Q5VYS8 1495 aaKnown RBP12.51□□□□□ -0.41
CACNA1D-220ENST00000636999 PABPN1Q86U42 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
CACNA1D-220ENST00000636999 EHMT2Q96KQ7 1210 aa12.29□□□□□ -0.44
CACNA1D-220ENST00000636999 TRIM41Q8WV44 630 aa12.29□□□□□ -0.44
CACNA1D-220ENST00000636999 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
CACNA1D-220ENST00000636999 PCGF6Q9BYE7 350 aa12.24□□□□□ -0.45
CACNA1D-220ENST00000636999 FAM9AQ8IZU1 332 aaPredicted RBP12.24□□□□□ -0.45
CACNA1D-220ENST00000636999 SCRIBQ14160 1630 aa12.23□□□□□ -0.45
CACNA1D-220ENST00000636999 NACADO15069 1562 aa12.23□□□□□ -0.45
CACNA1D-220ENST00000636999 DCAF1Q9Y4B6 1507 aa12.17□□□□□ -0.46
CACNA1D-220ENST00000636999 APLP2Q06481 763 aa12.06□□□□□ -0.48
CACNA1D-220ENST00000636999 CHIC1Q5VXU3 224 aa12.01□□□□□ -0.49
CACNA1D-220ENST00000636999 UBTFP17480 764 aaKnown RBP11.99□□□□□ -0.49
CACNA1D-220ENST00000636999 MYO15BQ96JP2 1530 aa11.98□□□□□ -0.49
CACNA1D-220ENST00000636999 RANGAP1P46060 587 aaPredicted RBP11.93□□□□□ -0.5
CACNA1D-220ENST00000636999 LOC105371045A0A1W2PR82 267 aa11.91□□□□□ -0.5
CACNA1D-220ENST00000636999 TTBK1Q5TCY1 1321 aaPredicted RBP11.88□□□□□ -0.51
CACNA1D-220ENST00000636999 HRCP23327 699 aa11.88□□□□□ -0.51
CACNA1D-220ENST00000636999 RSF1Q96T23 1441 aaPredicted RBP11.82□□□□□ -0.52
CACNA1D-220ENST00000636999 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
CACNA1D-220ENST00000636999 BAZ1AQ9NRL2 1556 aaPredicted RBP11.77□□□□□ -0.52
CACNA1D-220ENST00000636999 PPARGC1BQ86YN6 1023 aaKnown RBP11.76□□□□□ -0.53
CACNA1D-220ENST00000636999 TRIM26Q12899 539 aaPredicted RBP11.75□□□□□ -0.53
CACNA1D-220ENST00000636999 CECR2Q9BXF3 1484 aa11.74□□□□□ -0.53
CACNA1D-220ENST00000636999 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
CACNA1D-220ENST00000636999 BAZ1BQ9UIG0 1483 aaKnown RBP11.71□□□□□ -0.54
CACNA1D-220ENST00000636999 CCER1Q8TC90 406 aaPredicted RBP11.69□□□□□ -0.54
CACNA1D-220ENST00000636999 MROH2BQ7Z745 1585 aa11.61□□□□□ -0.55
CACNA1D-220ENST00000636999 CSRNP3Q8WYN3 585 aa11.6□□□□□ -0.55
CACNA1D-220ENST00000636999 SMARCA2P51531 1590 aa11.56□□□□□ -0.56
CACNA1D-220ENST00000636999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.56□□□□□ -0.56
CACNA1D-220ENST00000636999 HNRNPUL2Q1KMD3 747 aaKnown RBP11.56□□□□□ -0.56
CACNA1D-220ENST00000636999 FBLN2P98095 1184 aa11.54□□□□□ -0.56
CACNA1D-220ENST00000636999 CENPBP07199 599 aaPredicted RBP11.47□□□□□ -0.57
CACNA1D-220ENST00000636999 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.58
CACNA1D-220ENST00000636999 ATAD2BQ9ULI0 1458 aa11.46□□□□□ -0.58
CACNA1D-220ENST00000636999 SMARCA4P51532 1647 aa11.46□□□□□ -0.58
CACNA1D-220ENST00000636999 CCDC88BA6NC98 1476 aa11.44□□□□□ -0.58
CACNA1D-220ENST00000636999 WIZO95785 1651 aa11.43□□□□□ -0.58
CACNA1D-220ENST00000636999 TOP2AP11388 1531 aaKnown RBP11.42□□□□□ -0.58
CACNA1D-220ENST00000636999 YTHDC1Q96MU7 727 aaKnown RBP11.4□□□□□ -0.58
CACNA1D-220ENST00000636999 ERCC6Q03468 1493 aa11.38□□□□□ -0.59
CACNA1D-220ENST00000636999 EEA1Q15075 1411 aa11.38□□□□□ -0.59
CACNA1D-220ENST00000636999 ITGAEP38570 1179 aa11.37□□□□□ -0.59
CACNA1D-220ENST00000636999 P3H3Q8IVL6 736 aa11.35□□□□□ -0.59
CACNA1D-220ENST00000636999 PDS5BQ9NTI5 1447 aa11.35□□□□□ -0.59
CACNA1D-220ENST00000636999 CADPSQ9ULU8 1353 aa11.33□□□□□ -0.6
CACNA1D-220ENST00000636999 MYT1LQ9UL68 1186 aa11.33□□□□□ -0.6
CACNA1D-220ENST00000636999 EIF4G1Q04637 1599 aaKnown RBP11.33□□□□□ -0.6
CACNA1D-220ENST00000636999 KIF27Q86VH2 1401 aa11.32□□□□□ -0.6
CACNA1D-220ENST00000636999 CHMP7Q8WUX9 453 aaPredicted RBP11.32□□□□□ -0.6
CACNA1D-220ENST00000636999 PELP1Q8IZL8 1130 aaKnown RBP11.31□□□□□ -0.6
CACNA1D-220ENST00000636999 NCAPD3P42695 1498 aa11.31□□□□□ -0.6
CACNA1D-220ENST00000636999 FAM50AQ14320 339 aaKnown RBP11.26□□□□□ -0.61
CACNA1D-220ENST00000636999 BICRAQ9NZM4 1560 aa11.26□□□□□ -0.61
CACNA1D-220ENST00000636999 CDK11AQ9UQ88 783 aaPredicted RBP11.25□□□□□ -0.61
CACNA1D-220ENST00000636999 DIEXFQ68CQ4 756 aaKnown RBP11.25□□□□□ -0.61
CACNA1D-220ENST00000636999 GOLGA3Q08378 1498 aa11.23□□□□□ -0.61
CACNA1D-220ENST00000636999 ABCC8Q09428 1581 aa11.21□□□□□ -0.62
CACNA1D-220ENST00000636999 ARID3CA6NKF2 412 aa11.21□□□□□ -0.62
CACNA1D-220ENST00000636999 CUX2O14529 1486 aa11.21□□□□□ -0.62
CACNA1D-220ENST00000636999 CEP164Q9UPV0 1460 aa11.2□□□□□ -0.62
CACNA1D-220ENST00000636999 CLIP1P30622 1438 aa11.19□□□□□ -0.62
CACNA1D-220ENST00000636999 SOGA1O94964 1423 aa11.17□□□□□ -0.62
CACNA1D-220ENST00000636999 NPM1P06748 294 aaKnown RBP eCLIP11.16□□□□□ -0.62
CACNA1D-220ENST00000636999 FANCD2Q9BXW9 1451 aa11.16□□□□□ -0.62
CACNA1D-220ENST00000636999 CARMIL1Q5VZK9 1371 aa11.15□□□□□ -0.62
CACNA1D-220ENST00000636999 CC2D2AQ9P2K1 1620 aa11.15□□□□□ -0.62
CACNA1D-220ENST00000636999 TNIKQ9UKE5 1360 aa11.15□□□□□ -0.62
CACNA1D-220ENST00000636999 HMGXB3Q12766 1538 aa11.14□□□□□ -0.63
CACNA1D-220ENST00000636999 CEP162Q5TB80 1403 aa11.12□□□□□ -0.63
CACNA1D-220ENST00000636999 UNC13AQ9UPW8 1703 aa11.12□□□□□ -0.63
CACNA1D-220ENST00000636999 TDRD9Q8NDG6 1382 aaKnown RBP11.11□□□□□ -0.63
CACNA1D-220ENST00000636999 TRIM52Q96A61 297 aa11.09□□□□□ -0.63
CACNA1D-220ENST00000636999 ZNF777Q9ULD5 760 aaPredicted RBP11.08□□□□□ -0.64
CACNA1D-220ENST00000636999 GTF3C3Q9Y5Q9 886 aa11.08□□□□□ -0.64
CACNA1D-220ENST00000636999 MTUS2Q5JR59 1369 aa11.07□□□□□ -0.64
CACNA1D-220ENST00000636999 CFTRP13569 1480 aa11.06□□□□□ -0.64
CACNA1D-220ENST00000636999 ZNF316A6NFI3 1004 aaPredicted RBP11.03□□□□□ -0.64
CACNA1D-220ENST00000636999 ACIN1Q9UKV3 1341 aaKnown RBP11.02□□□□□ -0.65
CACNA1D-220ENST00000636999 PLEKHD1A6NEE1 506 aa11.01□□□□□ -0.65
CACNA1D-220ENST00000636999 PEG3Q9GZU2 1588 aa11□□□□□ -0.65
CACNA1D-220ENST00000636999 DNAJC5BQ9UF47 199 aa10.99□□□□□ -0.65
CACNA1D-220ENST00000636999 NEFLP07196 543 aa10.99□□□□□ -0.65
CACNA1D-220ENST00000636999 FGD5Q6ZNL6 1462 aa10.98□□□□□ -0.65
CACNA1D-220ENST00000636999 FHAD1B1AJZ9 1412 aa10.98□□□□□ -0.65
CACNA1D-220ENST00000636999 NESP48681 1621 aa10.97□□□□□ -0.65
CACNA1D-220ENST00000636999 RAPGEF2Q9Y4G8 1499 aa10.97□□□□□ -0.65
CACNA1D-220ENST00000636999 SCAF1Q9H7N4 1312 aaKnown RBP10.94□□□□□ -0.66
CACNA1D-220ENST00000636999 CARMIL2Q6F5E8 1435 aa10.94□□□□□ -0.66
CACNA1D-220ENST00000636999 TSPY4P0CV99 314 aa10.94□□□□□ -0.66
CACNA1D-220ENST00000636999 TSPY10P0CW01 314 aa10.94□□□□□ -0.66
CACNA1D-220ENST00000636999 NEUROD1Q13562 356 aa10.94□□□□□ -0.66
CACNA1D-220ENST00000636999 KCNH8Q96L42 1107 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms