RNA–Protein interactions for RNA: ENST00000634335.1

GABRA1-209, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 1,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-209ENST00000634335 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
GABRA1-209ENST00000634335 AEBP2Q6ZN18 517 aaPredicted RBP23.36■■□□□ 1.33
GABRA1-209ENST00000634335 NISCHQ9Y2I1 1504 aa21.12■□□□□ 0.97
GABRA1-209ENST00000634335 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
GABRA1-209ENST00000634335 SENP3Q9H4L4 574 aaPredicted RBP19.7■□□□□ 0.74
GABRA1-209ENST00000634335 PLPPR3Q6T4P5 718 aa19.6■□□□□ 0.73
GABRA1-209ENST00000634335 CCDC180Q9P1Z9 1646 aa18.74■□□□□ 0.59
GABRA1-209ENST00000634335 ADRA2BP18089 450 aa18.29■□□□□ 0.52
GABRA1-209ENST00000634335 ABCC9O60706 1549 aa18.21■□□□□ 0.51
GABRA1-209ENST00000634335 FOXD1Q16676 465 aa18.16■□□□□ 0.5
GABRA1-209ENST00000634335 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
GABRA1-209ENST00000634335 KCNA4P22459 653 aa17.92■□□□□ 0.46
GABRA1-209ENST00000634335 EHMT2Q96KQ7 1210 aa17.65■□□□□ 0.42
GABRA1-209ENST00000634335 ZCCHC6Q5VYS8 1495 aaKnown RBP17.63■□□□□ 0.41
GABRA1-209ENST00000634335 NACADO15069 1562 aa17.62■□□□□ 0.41
GABRA1-209ENST00000634335 RB1CC1Q8TDY2 1594 aa17.61■□□□□ 0.41
GABRA1-209ENST00000634335 MYO15BQ96JP2 1530 aa17.58■□□□□ 0.41
GABRA1-209ENST00000634335 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.4
GABRA1-209ENST00000634335 DCAF1Q9Y4B6 1507 aa17.52■□□□□ 0.4
GABRA1-209ENST00000634335 PPP4R3CPQ6ZMV5 832 aa17.36■□□□□ 0.37
GABRA1-209ENST00000634335 PIAS4Q8N2W9 510 aaPredicted RBP17.31■□□□□ 0.36
GABRA1-209ENST00000634335 SLC4A1APQ9BWU0 796 aaKnown RBP17.22■□□□□ 0.35
GABRA1-209ENST00000634335 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
GABRA1-209ENST00000634335 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
GABRA1-209ENST00000634335 UNC13AQ9UPW8 1703 aa17.07■□□□□ 0.32
GABRA1-209ENST00000634335 SCRIBQ14160 1630 aa17.07■□□□□ 0.32
GABRA1-209ENST00000634335 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
GABRA1-209ENST00000634335 BICRAQ9NZM4 1560 aa17■□□□□ 0.31
GABRA1-209ENST00000634335 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
GABRA1-209ENST00000634335 NPM3O75607 178 aaKnown RBP16.91■□□□□ 0.3
GABRA1-209ENST00000634335 CNKSR2Q8WXI2 1034 aa16.7■□□□□ 0.26
GABRA1-209ENST00000634335 SCAF1Q9H7N4 1312 aaKnown RBP16.65■□□□□ 0.26
GABRA1-209ENST00000634335 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
GABRA1-209ENST00000634335 DNAJC5BQ9UF47 199 aa16.57■□□□□ 0.24
GABRA1-209ENST00000634335 ZBTB22O15209 634 aa16.52■□□□□ 0.24
GABRA1-209ENST00000634335 CC2D2AQ9P2K1 1620 aa16.48■□□□□ 0.23
GABRA1-209ENST00000634335 MSH5O43196 834 aa16.42■□□□□ 0.22
GABRA1-209ENST00000634335 CECR2Q9BXF3 1484 aa16.4■□□□□ 0.22
GABRA1-209ENST00000634335 BAZ1AQ9NRL2 1556 aaPredicted RBP16.39■□□□□ 0.21
GABRA1-209ENST00000634335 SMARCA4P51532 1647 aa16.35■□□□□ 0.21
GABRA1-209ENST00000634335 SMARCA2P51531 1590 aa16.27■□□□□ 0.2
GABRA1-209ENST00000634335 ATAD2BQ9ULI0 1458 aa16.27■□□□□ 0.19
GABRA1-209ENST00000634335 FOXD4L1Q9NU39 408 aa16.26■□□□□ 0.19
GABRA1-209ENST00000634335 NCAPD3P42695 1498 aa16.26■□□□□ 0.19
GABRA1-209ENST00000634335 MROH2BQ7Z745 1585 aa16.25■□□□□ 0.19
GABRA1-209ENST00000634335 PEG3Q9GZU2 1588 aa16.22■□□□□ 0.19
GABRA1-209ENST00000634335 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
GABRA1-209ENST00000634335 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
GABRA1-209ENST00000634335 RNF216Q9NWF9 866 aaPredicted RBP16.17■□□□□ 0.18
GABRA1-209ENST00000634335 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
GABRA1-209ENST00000634335 RSF1Q96T23 1441 aaPredicted RBP16.13■□□□□ 0.17
GABRA1-209ENST00000634335 WIZO95785 1651 aa16.05■□□□□ 0.16
GABRA1-209ENST00000634335 TOP2AP11388 1531 aaKnown RBP15.95■□□□□ 0.14
GABRA1-209ENST00000634335 HOXD11P31277 338 aaPredicted RBP15.9■□□□□ 0.14
GABRA1-209ENST00000634335 DMRT2Q9Y5R5 561 aa15.87■□□□□ 0.13
GABRA1-209ENST00000634335 LAMC3Q9Y6N6 1575 aa15.81■□□□□ 0.12
GABRA1-209ENST00000634335 CADPSQ9ULU8 1353 aa15.79■□□□□ 0.12
GABRA1-209ENST00000634335 SLC4A2P04920 1241 aa15.77■□□□□ 0.12
GABRA1-209ENST00000634335 NESP48681 1621 aa15.76■□□□□ 0.11
GABRA1-209ENST00000634335 SUPT5HO00267 1087 aaKnown RBP15.76■□□□□ 0.11
GABRA1-209ENST00000634335 CCDC88BA6NC98 1476 aa15.74■□□□□ 0.11
GABRA1-209ENST00000634335 ERCC6Q03468 1493 aa15.74■□□□□ 0.11
GABRA1-209ENST00000634335 PDS5BQ9NTI5 1447 aa15.73■□□□□ 0.11
GABRA1-209ENST00000634335 CFTRP13569 1480 aa15.71■□□□□ 0.11
GABRA1-209ENST00000634335 ATXN8OSP0DMR3 200 aa15.67■□□□□ 0.1
GABRA1-209ENST00000634335 MYCNP04198 464 aaPredicted RBP15.61■□□□□ 0.09
GABRA1-209ENST00000634335 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
GABRA1-209ENST00000634335 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
GABRA1-209ENST00000634335 AMER1Q5JTC6 1135 aaPredicted RBP15.57■□□□□ 0.08
GABRA1-209ENST00000634335 CUX2O14529 1486 aa15.56■□□□□ 0.08
GABRA1-209ENST00000634335 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
GABRA1-209ENST00000634335 RTN4Q9NQC3 1192 aaKnown RBP15.54■□□□□ 0.08
GABRA1-209ENST00000634335 MRC2Q9UBG0 1479 aa15.53■□□□□ 0.08
GABRA1-209ENST00000634335 THOC2Q8NI27 1593 aaKnown RBP15.53■□□□□ 0.08
GABRA1-209ENST00000634335 PRDM2Q13029 1718 aa15.52■□□□□ 0.08
GABRA1-209ENST00000634335 WDR62O43379 1518 aa15.48■□□□□ 0.07
GABRA1-209ENST00000634335 SLC24A1O60721 1099 aa15.44■□□□□ 0.06
GABRA1-209ENST00000634335 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
GABRA1-209ENST00000634335 URB2Q14146 1524 aaKnown RBP15.4■□□□□ 0.06
GABRA1-209ENST00000634335 FKBP8Q14318 412 aa15.39■□□□□ 0.05
GABRA1-209ENST00000634335 DNMBPQ6XZF7 1577 aa15.35■□□□□ 0.05
GABRA1-209ENST00000634335 TOPBP1Q92547 1522 aa15.34■□□□□ 0.05
GABRA1-209ENST00000634335 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
GABRA1-209ENST00000634335 CUX1P39880 1505 aa15.25■□□□□ 0.03
GABRA1-209ENST00000634335 WRNQ14191 1432 aaPredicted RBP eCLIP15.23■□□□□ 0.03
GABRA1-209ENST00000634335 POLA1P09884 1462 aaPredicted RBP15.22■□□□□ 0.03
GABRA1-209ENST00000634335 FGD5Q6ZNL6 1462 aa15.2■□□□□ 0.02
GABRA1-209ENST00000634335 SOGA1O94964 1423 aa15.17■□□□□ 0.02
GABRA1-209ENST00000634335 TOP2BQ02880 1626 aa15.16■□□□□ 0.02
GABRA1-209ENST00000634335 TARBP1Q13395 1621 aaKnown RBP15.14■□□□□ 0.01
GABRA1-209ENST00000634335 BIVM-ERCC5R4GMW8 1640 aa15.14■□□□□ 0.01
GABRA1-209ENST00000634335 SYNJ1O43426 1573 aa15.13■□□□□ 0.01
GABRA1-209ENST00000634335 RAD54L2Q9Y4B4 1467 aa15.13■□□□□ 0.01
GABRA1-209ENST00000634335 ZNF608Q9ULD9 1512 aaPredicted RBP15.12■□□□□ 0.01
GABRA1-209ENST00000634335 WDR97A6NE52 1622 aa15.11■□□□□ 0.01
GABRA1-209ENST00000634335 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
GABRA1-209ENST00000634335 ABCA10Q8WWZ4 1543 aa15.08■□□□□ 0.01
GABRA1-209ENST00000634335 EIF4G3O43432 1585 aaKnown RBP15.08■□□□□ 0
GABRA1-209ENST00000634335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.08■□□□□ 0
GABRA1-209ENST00000634335 HNRNPUL2Q1KMD3 747 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms