RNA–Protein interactions for RNA: ENST00000632624.1

LINC01002-218, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5

Gene LINC01002, Length 1,297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-218ENST00000632624 AEBP2Q6ZN18 517 aaPredicted RBP19.97■□□□□ 0.79
LINC01002-218ENST00000632624 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
LINC01002-218ENST00000632624 SENP3Q9H4L4 574 aaPredicted RBP17■□□□□ 0.31
LINC01002-218ENST00000632624 PHF23Q9BUL5 403 aaPredicted RBP16.83■□□□□ 0.28
LINC01002-218ENST00000632624 NISCHQ9Y2I1 1504 aa16.45■□□□□ 0.22
LINC01002-218ENST00000632624 FOXD1Q16676 465 aa15.9■□□□□ 0.14
LINC01002-218ENST00000632624 ABCC9O60706 1549 aa15.07■□□□□ 0
LINC01002-218ENST00000632624 PLPPR3Q6T4P5 718 aa15.04■□□□□ -0
LINC01002-218ENST00000632624 MSH5O43196 834 aa14.85□□□□□ -0.03
LINC01002-218ENST00000632624 PIAS4Q8N2W9 510 aaPredicted RBP14.84□□□□□ -0.03
LINC01002-218ENST00000632624 PPP6R1Q9UPN7 881 aa14.84□□□□□ -0.03
LINC01002-218ENST00000632624 ADRA2BP18089 450 aa14.81□□□□□ -0.04
LINC01002-218ENST00000632624 CCDC180Q9P1Z9 1646 aa14.67□□□□□ -0.06
LINC01002-218ENST00000632624 POTEDQ86YR6 584 aa14.67□□□□□ -0.06
LINC01002-218ENST00000632624 DNAJC5BQ9UF47 199 aa14.42□□□□□ -0.1
LINC01002-218ENST00000632624 DCAF8L2P0C7V8 631 aa14.21□□□□□ -0.13
LINC01002-218ENST00000632624 RB1CC1Q8TDY2 1594 aa14.2□□□□□ -0.14
LINC01002-218ENST00000632624 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
LINC01002-218ENST00000632624 NACADO15069 1562 aa14.07□□□□□ -0.16
LINC01002-218ENST00000632624 MYO15BQ96JP2 1530 aa13.83□□□□□ -0.2
LINC01002-218ENST00000632624 BICRAQ9NZM4 1560 aa13.73□□□□□ -0.21
LINC01002-218ENST00000632624 MAPK8IP2Q13387 824 aaPredicted RBP13.64□□□□□ -0.23
LINC01002-218ENST00000632624 CECR2Q9BXF3 1484 aa13.62□□□□□ -0.23
LINC01002-218ENST00000632624 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
LINC01002-218ENST00000632624 UNC13AQ9UPW8 1703 aa13.59□□□□□ -0.23
LINC01002-218ENST00000632624 DCAF1Q9Y4B6 1507 aa13.55□□□□□ -0.24
LINC01002-218ENST00000632624 ZCCHC6Q5VYS8 1495 aaKnown RBP13.55□□□□□ -0.24
LINC01002-218ENST00000632624 CC2D2AQ9P2K1 1620 aa13.51□□□□□ -0.25
LINC01002-218ENST00000632624 SCAF1Q9H7N4 1312 aaKnown RBP13.5□□□□□ -0.25
LINC01002-218ENST00000632624 DMRT2Q9Y5R5 561 aa13.48□□□□□ -0.25
LINC01002-218ENST00000632624 EIF4G1Q04637 1599 aaKnown RBP13.45□□□□□ -0.26
LINC01002-218ENST00000632624 DNAJC5Q9H3Z4 198 aa13.45□□□□□ -0.26
LINC01002-218ENST00000632624 SCRIBQ14160 1630 aa13.43□□□□□ -0.26
LINC01002-218ENST00000632624 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
LINC01002-218ENST00000632624 CUX2O14529 1486 aa13.08□□□□□ -0.32
LINC01002-218ENST00000632624 NCAPD3P42695 1498 aa13.08□□□□□ -0.32
LINC01002-218ENST00000632624 ERCC6Q03468 1493 aa13.07□□□□□ -0.32
LINC01002-218ENST00000632624 DCAF8L1A6NGE4 600 aa13.02□□□□□ -0.33
LINC01002-218ENST00000632624 ATAD2BQ9ULI0 1458 aa12.97□□□□□ -0.33
LINC01002-218ENST00000632624 CNKSR2Q8WXI2 1034 aa12.95□□□□□ -0.34
LINC01002-218ENST00000632624 HOXD11P31277 338 aaPredicted RBP12.94□□□□□ -0.34
LINC01002-218ENST00000632624 SMARCA2P51531 1590 aa12.89□□□□□ -0.35
LINC01002-218ENST00000632624 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
LINC01002-218ENST00000632624 NESP48681 1621 aa12.85□□□□□ -0.35
LINC01002-218ENST00000632624 HMGXB3Q12766 1538 aa12.83□□□□□ -0.35
LINC01002-218ENST00000632624 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
LINC01002-218ENST00000632624 BAZ1BQ9UIG0 1483 aaKnown RBP12.83□□□□□ -0.36
LINC01002-218ENST00000632624 SMARCA4P51532 1647 aa12.78□□□□□ -0.36
LINC01002-218ENST00000632624 PDS5BQ9NTI5 1447 aa12.78□□□□□ -0.36
LINC01002-218ENST00000632624 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
LINC01002-218ENST00000632624 BAZ1AQ9NRL2 1556 aaPredicted RBP12.76□□□□□ -0.37
LINC01002-218ENST00000632624 CADPSQ9ULU8 1353 aa12.71□□□□□ -0.37
LINC01002-218ENST00000632624 LAMC3Q9Y6N6 1575 aa12.7□□□□□ -0.38
LINC01002-218ENST00000632624 RNF39Q9H2S5 420 aa12.68□□□□□ -0.38
LINC01002-218ENST00000632624 PEG3Q9GZU2 1588 aa12.68□□□□□ -0.38
LINC01002-218ENST00000632624 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
LINC01002-218ENST00000632624 MROH2BQ7Z745 1585 aa12.65□□□□□ -0.38
LINC01002-218ENST00000632624 THOC2Q8NI27 1593 aaKnown RBP12.64□□□□□ -0.39
LINC01002-218ENST00000632624 OSCARQ8IYS5 282 aa12.62□□□□□ -0.39
LINC01002-218ENST00000632624 MRC2Q9UBG0 1479 aa12.59□□□□□ -0.39
LINC01002-218ENST00000632624 WDR62O43379 1518 aa12.52□□□□□ -0.41
LINC01002-218ENST00000632624 CEP164Q9UPV0 1460 aa12.51□□□□□ -0.41
LINC01002-218ENST00000632624 KIF21AQ7Z4S6 1674 aa12.49□□□□□ -0.41
LINC01002-218ENST00000632624 FANCD2Q9BXW9 1451 aa12.49□□□□□ -0.41
LINC01002-218ENST00000632624 NPM3O75607 178 aaKnown RBP12.49□□□□□ -0.41
LINC01002-218ENST00000632624 C1QBPQ07021 282 aaKnown RBP12.49□□□□□ -0.41
LINC01002-218ENST00000632624 CFTRP13569 1480 aa12.46□□□□□ -0.42
LINC01002-218ENST00000632624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC01002-218ENST00000632624 WIZO95785 1651 aa12.4□□□□□ -0.42
LINC01002-218ENST00000632624 RSF1Q96T23 1441 aaPredicted RBP12.39□□□□□ -0.43
LINC01002-218ENST00000632624 URB2Q14146 1524 aaKnown RBP12.36□□□□□ -0.43
LINC01002-218ENST00000632624 KCNA4P22459 653 aa12.34□□□□□ -0.43
LINC01002-218ENST00000632624 CYB5RLQ6IPT4 315 aa12.33□□□□□ -0.44
LINC01002-218ENST00000632624 IFT140Q96RY7 1462 aa12.3□□□□□ -0.44
LINC01002-218ENST00000632624 TOP2AP11388 1531 aaKnown RBP12.29□□□□□ -0.44
LINC01002-218ENST00000632624 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
LINC01002-218ENST00000632624 FBLN2P98095 1184 aa12.26□□□□□ -0.45
LINC01002-218ENST00000632624 ZNF608Q9ULD9 1512 aaPredicted RBP12.26□□□□□ -0.45
LINC01002-218ENST00000632624 CCDC88BA6NC98 1476 aa12.24□□□□□ -0.45
LINC01002-218ENST00000632624 ABCC8Q09428 1581 aa12.23□□□□□ -0.45
LINC01002-218ENST00000632624 ARHGEF11O15085 1522 aa12.21□□□□□ -0.45
LINC01002-218ENST00000632624 TOPBP1Q92547 1522 aa12.2□□□□□ -0.46
LINC01002-218ENST00000632624 RIMBP3CA6NJZ7 1639 aa12.19□□□□□ -0.46
LINC01002-218ENST00000632624 RIMBP3BA6NNM3 1639 aa12.19□□□□□ -0.46
LINC01002-218ENST00000632624 RIMBP3Q9UFD9 1639 aa12.19□□□□□ -0.46
LINC01002-218ENST00000632624 AQRO60306 1485 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC01002-218ENST00000632624 CHMP7Q8WUX9 453 aaPredicted RBP12.14□□□□□ -0.47
LINC01002-218ENST00000632624 TDRD9Q8NDG6 1382 aaKnown RBP12.12□□□□□ -0.47
LINC01002-218ENST00000632624 SOGA1O94964 1423 aa12.11□□□□□ -0.47
LINC01002-218ENST00000632624 U3KPZ7 1027 aaPredicted RBP12.09□□□□□ -0.47
LINC01002-218ENST00000632624 DNMBPQ6XZF7 1577 aa12.09□□□□□ -0.47
LINC01002-218ENST00000632624 ARAP1Q96P48 1450 aa12.08□□□□□ -0.48
LINC01002-218ENST00000632624 POLA1P09884 1462 aaPredicted RBP12.06□□□□□ -0.48
LINC01002-218ENST00000632624 EIF4G3O43432 1585 aaKnown RBP12.05□□□□□ -0.48
LINC01002-218ENST00000632624 RAD54L2Q9Y4B4 1467 aa12.05□□□□□ -0.48
LINC01002-218ENST00000632624 TARBP1Q13395 1621 aaKnown RBP12.02□□□□□ -0.49
LINC01002-218ENST00000632624 SNAPC4Q5SXM2 1469 aa11.99□□□□□ -0.49
LINC01002-218ENST00000632624 SPINK5Q9NQ38 1064 aaPredicted RBP11.98□□□□□ -0.49
LINC01002-218ENST00000632624 GRIN2BQ13224 1484 aa11.97□□□□□ -0.49
LINC01002-218ENST00000632624 MAGI1Q96QZ7 1491 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms