RNA–Protein interactions for RNA: ENST00000632315.1

SVIL-213, Transcript of supervillin, humanhuman

TSL 5

Gene SVIL, Length 2,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-213ENST00000632315 NISCHQ9Y2I1 1504 aa23.04■■□□□ 1.28
SVIL-213ENST00000632315 DCAF8L2P0C7V8 631 aa20.09■□□□□ 0.81
SVIL-213ENST00000632315 SHROOM4Q9ULL8 1493 aa20.07■□□□□ 0.8
SVIL-213ENST00000632315 SUPT5HO00267 1087 aaKnown RBP19.54■□□□□ 0.72
SVIL-213ENST00000632315 CCDC180Q9P1Z9 1646 aa19.45■□□□□ 0.7
SVIL-213ENST00000632315 ZCCHC6Q5VYS8 1495 aaKnown RBP19.33■□□□□ 0.69
SVIL-213ENST00000632315 ABCC9O60706 1549 aa19.16■□□□□ 0.66
SVIL-213ENST00000632315 MYO15BQ96JP2 1530 aa18.99■□□□□ 0.63
SVIL-213ENST00000632315 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
SVIL-213ENST00000632315 HRCP23327 699 aa18.84■□□□□ 0.61
SVIL-213ENST00000632315 PCGF6Q9BYE7 350 aa18.8■□□□□ 0.6
SVIL-213ENST00000632315 SCRIBQ14160 1630 aa18.73■□□□□ 0.59
SVIL-213ENST00000632315 PPARGC1BQ86YN6 1023 aaKnown RBP18.64■□□□□ 0.57
SVIL-213ENST00000632315 LOC105371045A0A1W2PR82 267 aa18.59■□□□□ 0.57
SVIL-213ENST00000632315 DCAF1Q9Y4B6 1507 aa18.53■□□□□ 0.56
SVIL-213ENST00000632315 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
SVIL-213ENST00000632315 CECR2Q9BXF3 1484 aa18.31■□□□□ 0.52
SVIL-213ENST00000632315 EHMT2Q96KQ7 1210 aa18.28■□□□□ 0.52
SVIL-213ENST00000632315 NACADO15069 1562 aa18.22■□□□□ 0.51
SVIL-213ENST00000632315 RSF1Q96T23 1441 aaPredicted RBP18.2■□□□□ 0.5
SVIL-213ENST00000632315 TRIM26Q12899 539 aaPredicted RBP18.2■□□□□ 0.5
SVIL-213ENST00000632315 RB1CC1Q8TDY2 1594 aa18.12■□□□□ 0.49
SVIL-213ENST00000632315 FAM9AQ8IZU1 332 aaPredicted RBP18.11■□□□□ 0.49
SVIL-213ENST00000632315 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.48
SVIL-213ENST00000632315 TRIM41Q8WV44 630 aa18.04■□□□□ 0.48
SVIL-213ENST00000632315 WIZO95785 1651 aa17.95■□□□□ 0.46
SVIL-213ENST00000632315 UNC13AQ9UPW8 1703 aa17.89■□□□□ 0.46
SVIL-213ENST00000632315 ZEB1P37275 1124 aaPredicted RBP17.81■□□□□ 0.44
SVIL-213ENST00000632315 BICRAQ9NZM4 1560 aa17.75■□□□□ 0.43
SVIL-213ENST00000632315 BAZ1AQ9NRL2 1556 aaPredicted RBP17.65■□□□□ 0.42
SVIL-213ENST00000632315 SCAF1Q9H7N4 1312 aaKnown RBP17.63■□□□□ 0.41
SVIL-213ENST00000632315 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
SVIL-213ENST00000632315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.6■□□□□ 0.41
SVIL-213ENST00000632315 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
SVIL-213ENST00000632315 TTBK1Q5TCY1 1321 aaPredicted RBP17.56■□□□□ 0.4
SVIL-213ENST00000632315 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
SVIL-213ENST00000632315 CCER1Q8TC90 406 aaPredicted RBP17.5■□□□□ 0.39
SVIL-213ENST00000632315 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
SVIL-213ENST00000632315 RANGAP1P46060 587 aaPredicted RBP17.41■□□□□ 0.38
SVIL-213ENST00000632315 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
SVIL-213ENST00000632315 ATAD2BQ9ULI0 1458 aa17.37■□□□□ 0.37
SVIL-213ENST00000632315 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
SVIL-213ENST00000632315 BAZ1BQ9UIG0 1483 aaKnown RBP17.33■□□□□ 0.36
SVIL-213ENST00000632315 PELP1Q8IZL8 1130 aaKnown RBP17.32■□□□□ 0.36
SVIL-213ENST00000632315 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
SVIL-213ENST00000632315 SOGA1O94964 1423 aa17.3■□□□□ 0.36
SVIL-213ENST00000632315 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
SVIL-213ENST00000632315 ACIN1Q9UKV3 1341 aaKnown RBP17.29■□□□□ 0.36
SVIL-213ENST00000632315 DIEXFQ68CQ4 756 aaKnown RBP17.28■□□□□ 0.36
SVIL-213ENST00000632315 EIF4G1Q04637 1599 aaKnown RBP17.26■□□□□ 0.35
SVIL-213ENST00000632315 CEP162Q5TB80 1403 aa17.21■□□□□ 0.35
SVIL-213ENST00000632315 UBTFP17480 764 aaKnown RBP17.2■□□□□ 0.34
SVIL-213ENST00000632315 GTF3C3Q9Y5Q9 886 aa17.18■□□□□ 0.34
SVIL-213ENST00000632315 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
SVIL-213ENST00000632315 CSRNP3Q8WYN3 585 aa17.12■□□□□ 0.33
SVIL-213ENST00000632315 CENPBP07199 599 aaPredicted RBP17.09■□□□□ 0.33
SVIL-213ENST00000632315 TNIKQ9UKE5 1360 aa17.09■□□□□ 0.33
SVIL-213ENST00000632315 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
SVIL-213ENST00000632315 YTHDC1Q96MU7 727 aaKnown RBP17.06■□□□□ 0.32
SVIL-213ENST00000632315 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
SVIL-213ENST00000632315 SYNJ1O43426 1573 aa17.05■□□□□ 0.32
SVIL-213ENST00000632315 ZNF316A6NFI3 1004 aaPredicted RBP17.03■□□□□ 0.32
SVIL-213ENST00000632315 CC2D2AQ9P2K1 1620 aa16.98■□□□□ 0.31
SVIL-213ENST00000632315 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
SVIL-213ENST00000632315 GOLGA3Q08378 1498 aa16.93■□□□□ 0.3
SVIL-213ENST00000632315 NESP48681 1621 aa16.92■□□□□ 0.3
SVIL-213ENST00000632315 EEA1Q15075 1411 aa16.92■□□□□ 0.3
SVIL-213ENST00000632315 MIER1Q8N108 512 aa16.92■□□□□ 0.3
SVIL-213ENST00000632315 CLIP1P30622 1438 aa16.83■□□□□ 0.28
SVIL-213ENST00000632315 HMGXB3Q12766 1538 aa16.81■□□□□ 0.28
SVIL-213ENST00000632315 RAPGEF2Q9Y4G8 1499 aa16.81■□□□□ 0.28
SVIL-213ENST00000632315 APLP2Q06481 763 aa16.8■□□□□ 0.28
SVIL-213ENST00000632315 CUX1P39880 1505 aa16.8■□□□□ 0.28
SVIL-213ENST00000632315 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
SVIL-213ENST00000632315 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.28
SVIL-213ENST00000632315 CFTRP13569 1480 aa16.77■□□□□ 0.28
SVIL-213ENST00000632315 P3H3Q8IVL6 736 aa16.75■□□□□ 0.27
SVIL-213ENST00000632315 VPS8Q8N3P4 1428 aa16.74■□□□□ 0.27
SVIL-213ENST00000632315 KIF21BO75037 1637 aa16.7■□□□□ 0.26
SVIL-213ENST00000632315 RAD54L2Q9Y4B4 1467 aa16.68■□□□□ 0.26
SVIL-213ENST00000632315 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
SVIL-213ENST00000632315 ATP1B4Q9UN42 357 aaPredicted RBP16.66■□□□□ 0.26
SVIL-213ENST00000632315 CUX2O14529 1486 aa16.66■□□□□ 0.26
SVIL-213ENST00000632315 FANCD2Q9BXW9 1451 aa16.65■□□□□ 0.26
SVIL-213ENST00000632315 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
SVIL-213ENST00000632315 KANK4Q5T7N3 995 aaPredicted RBP16.61■□□□□ 0.25
SVIL-213ENST00000632315 TDRD9Q8NDG6 1382 aaKnown RBP16.58■□□□□ 0.25
SVIL-213ENST00000632315 DHX57Q6P158 1386 aaKnown RBP16.56■□□□□ 0.24
SVIL-213ENST00000632315 KIF27Q86VH2 1401 aa16.56■□□□□ 0.24
SVIL-213ENST00000632315 ITGAEP38570 1179 aa16.55■□□□□ 0.24
SVIL-213ENST00000632315 BIVM-ERCC5R4GMW8 1640 aa16.53■□□□□ 0.24
SVIL-213ENST00000632315 IGF1RP08069 1367 aa16.53■□□□□ 0.24
SVIL-213ENST00000632315 ARID3CA6NKF2 412 aa16.51■□□□□ 0.23
SVIL-213ENST00000632315 ARAP1Q96P48 1450 aa16.49■□□□□ 0.23
SVIL-213ENST00000632315 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
SVIL-213ENST00000632315 PRXQ9BXM0 1461 aa16.46■□□□□ 0.23
SVIL-213ENST00000632315 POLA1P09884 1462 aaPredicted RBP16.46■□□□□ 0.23
SVIL-213ENST00000632315 URB2Q14146 1524 aaKnown RBP16.45■□□□□ 0.22
SVIL-213ENST00000632315 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
SVIL-213ENST00000632315 SUPT16HQ9Y5B9 1047 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms