RNA–Protein interactions for RNA: ENST00000629717.1

NRXN1-231, Transcript of neurexin 1, humanhuman

TSL 2

Gene NRXN1, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-231ENST00000629717 AEBP2Q6ZN18 517 aaPredicted RBP26.93■■□□□ 1.9
NRXN1-231ENST00000629717 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
NRXN1-231ENST00000629717 SENP3Q9H4L4 574 aaPredicted RBP22.9■■□□□ 1.26
NRXN1-231ENST00000629717 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
NRXN1-231ENST00000629717 NISCHQ9Y2I1 1504 aa21.59■■□□□ 1.05
NRXN1-231ENST00000629717 FOXD1Q16676 465 aa21.31■■□□□ 1
NRXN1-231ENST00000629717 PLPPR3Q6T4P5 718 aa20.86■□□□□ 0.93
NRXN1-231ENST00000629717 PPP6R1Q9UPN7 881 aa20.21■□□□□ 0.83
NRXN1-231ENST00000629717 ADRA2BP18089 450 aa20.15■□□□□ 0.82
NRXN1-231ENST00000629717 PIAS4Q8N2W9 510 aaPredicted RBP19.98■□□□□ 0.79
NRXN1-231ENST00000629717 MSH5O43196 834 aa19.79■□□□□ 0.76
NRXN1-231ENST00000629717 CCDC180Q9P1Z9 1646 aa19.21■□□□□ 0.67
NRXN1-231ENST00000629717 ABCC9O60706 1549 aa19■□□□□ 0.63
NRXN1-231ENST00000629717 POTEDQ86YR6 584 aa18.7■□□□□ 0.58
NRXN1-231ENST00000629717 SCAF1Q9H7N4 1312 aaKnown RBP18.44■□□□□ 0.54
NRXN1-231ENST00000629717 MAPK8IP2Q13387 824 aaPredicted RBP18.4■□□□□ 0.54
NRXN1-231ENST00000629717 PPP4R3CPQ6ZMV5 832 aa18.34■□□□□ 0.53
NRXN1-231ENST00000629717 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
NRXN1-231ENST00000629717 RB1CC1Q8TDY2 1594 aa18.19■□□□□ 0.5
NRXN1-231ENST00000629717 DCAF8L2P0C7V8 631 aa18.15■□□□□ 0.5
NRXN1-231ENST00000629717 NACADO15069 1562 aa18.14■□□□□ 0.49
NRXN1-231ENST00000629717 MYO15BQ96JP2 1530 aa18.01■□□□□ 0.47
NRXN1-231ENST00000629717 ZCCHC6Q5VYS8 1495 aaKnown RBP17.94■□□□□ 0.46
NRXN1-231ENST00000629717 CNKSR2Q8WXI2 1034 aa17.91■□□□□ 0.46
NRXN1-231ENST00000629717 DCAF1Q9Y4B6 1507 aa17.86■□□□□ 0.45
NRXN1-231ENST00000629717 PABPN1Q86U42 306 aaKnown RBP eCLIP17.76■□□□□ 0.43
NRXN1-231ENST00000629717 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
NRXN1-231ENST00000629717 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
NRXN1-231ENST00000629717 UNC13AQ9UPW8 1703 aa17.68■□□□□ 0.42
NRXN1-231ENST00000629717 RNF216Q9NWF9 866 aaPredicted RBP17.66■□□□□ 0.42
NRXN1-231ENST00000629717 BICRAQ9NZM4 1560 aa17.65■□□□□ 0.42
NRXN1-231ENST00000629717 DNAJC5BQ9UF47 199 aa17.63■□□□□ 0.41
NRXN1-231ENST00000629717 SCRIBQ14160 1630 aa17.52■□□□□ 0.4
NRXN1-231ENST00000629717 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
NRXN1-231ENST00000629717 KCNA4P22459 653 aa17.48■□□□□ 0.39
NRXN1-231ENST00000629717 SHROOM4Q9ULL8 1493 aa17.48■□□□□ 0.39
NRXN1-231ENST00000629717 DCAF8L1A6NGE4 600 aa17.4■□□□□ 0.38
NRXN1-231ENST00000629717 EIF4G1Q04637 1599 aaKnown RBP17.19■□□□□ 0.34
NRXN1-231ENST00000629717 CC2D2AQ9P2K1 1620 aa17.15■□□□□ 0.34
NRXN1-231ENST00000629717 CECR2Q9BXF3 1484 aa17.11■□□□□ 0.33
NRXN1-231ENST00000629717 RNF39Q9H2S5 420 aa16.94■□□□□ 0.3
NRXN1-231ENST00000629717 EHMT2Q96KQ7 1210 aa16.93■□□□□ 0.3
NRXN1-231ENST00000629717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.28
NRXN1-231ENST00000629717 NCAPD3P42695 1498 aa16.78■□□□□ 0.28
NRXN1-231ENST00000629717 SMARCA4P51532 1647 aa16.75■□□□□ 0.27
NRXN1-231ENST00000629717 ATAD2BQ9ULI0 1458 aa16.74■□□□□ 0.27
NRXN1-231ENST00000629717 CACNB1Q02641 598 aaPredicted RBP16.74■□□□□ 0.27
NRXN1-231ENST00000629717 BAZ1AQ9NRL2 1556 aaPredicted RBP16.73■□□□□ 0.27
NRXN1-231ENST00000629717 SMARCA2P51531 1590 aa16.71■□□□□ 0.27
NRXN1-231ENST00000629717 C1QBPQ07021 282 aaKnown RBP16.7■□□□□ 0.26
NRXN1-231ENST00000629717 HMGXB3Q12766 1538 aa16.65■□□□□ 0.26
NRXN1-231ENST00000629717 MROH2BQ7Z745 1585 aa16.63■□□□□ 0.25
NRXN1-231ENST00000629717 SLC4A2P04920 1241 aa16.62■□□□□ 0.25
NRXN1-231ENST00000629717 PEG3Q9GZU2 1588 aa16.61■□□□□ 0.25
NRXN1-231ENST00000629717 BAZ1BQ9UIG0 1483 aaKnown RBP16.6■□□□□ 0.25
NRXN1-231ENST00000629717 SLC4A1APQ9BWU0 796 aaKnown RBP16.56■□□□□ 0.24
NRXN1-231ENST00000629717 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
NRXN1-231ENST00000629717 RSF1Q96T23 1441 aaPredicted RBP16.41■□□□□ 0.22
NRXN1-231ENST00000629717 ERCC6Q03468 1493 aa16.4■□□□□ 0.22
NRXN1-231ENST00000629717 WIZO95785 1651 aa16.4■□□□□ 0.22
NRXN1-231ENST00000629717 NESP48681 1621 aa16.39■□□□□ 0.21
NRXN1-231ENST00000629717 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
NRXN1-231ENST00000629717 LAMC3Q9Y6N6 1575 aa16.32■□□□□ 0.2
NRXN1-231ENST00000629717 CADPSQ9ULU8 1353 aa16.29■□□□□ 0.2
NRXN1-231ENST00000629717 CUX2O14529 1486 aa16.29■□□□□ 0.2
NRXN1-231ENST00000629717 PDS5BQ9NTI5 1447 aa16.27■□□□□ 0.19
NRXN1-231ENST00000629717 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
NRXN1-231ENST00000629717 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
NRXN1-231ENST00000629717 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
NRXN1-231ENST00000629717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.18■□□□□ 0.18
NRXN1-231ENST00000629717 HNRNPUL2Q1KMD3 747 aaKnown RBP16.18■□□□□ 0.18
NRXN1-231ENST00000629717 MYCNP04198 464 aaPredicted RBP16.17■□□□□ 0.18
NRXN1-231ENST00000629717 CFTRP13569 1480 aa16.15■□□□□ 0.18
NRXN1-231ENST00000629717 THOC2Q8NI27 1593 aaKnown RBP16.14■□□□□ 0.17
NRXN1-231ENST00000629717 KIF21AQ7Z4S6 1674 aa16.12■□□□□ 0.17
NRXN1-231ENST00000629717 CAPN15O75808 1086 aa16.12■□□□□ 0.17
NRXN1-231ENST00000629717 SAMD1Q6SPF0 538 aaPredicted RBP16.12■□□□□ 0.17
NRXN1-231ENST00000629717 APLP2Q06481 763 aa16.1■□□□□ 0.17
NRXN1-231ENST00000629717 ZBTB22O15209 634 aa16.09■□□□□ 0.17
NRXN1-231ENST00000629717 CCDC88BA6NC98 1476 aa16.09■□□□□ 0.17
NRXN1-231ENST00000629717 FANCD2Q9BXW9 1451 aa16.07■□□□□ 0.16
NRXN1-231ENST00000629717 MRC2Q9UBG0 1479 aa16.07■□□□□ 0.16
NRXN1-231ENST00000629717 CEP164Q9UPV0 1460 aa16.06■□□□□ 0.16
NRXN1-231ENST00000629717 DNAJC5Q9H3Z4 198 aa16.03■□□□□ 0.16
NRXN1-231ENST00000629717 WDR62O43379 1518 aa16.01■□□□□ 0.15
NRXN1-231ENST00000629717 DSG3P32926 999 aa15.97■□□□□ 0.15
NRXN1-231ENST00000629717 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
NRXN1-231ENST00000629717 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
NRXN1-231ENST00000629717 URB2Q14146 1524 aaKnown RBP15.91■□□□□ 0.14
NRXN1-231ENST00000629717 SUPT5HO00267 1087 aaKnown RBP15.88■□□□□ 0.13
NRXN1-231ENST00000629717 PRDM2Q13029 1718 aa15.87■□□□□ 0.13
NRXN1-231ENST00000629717 ABCC8Q09428 1581 aa15.8■□□□□ 0.12
NRXN1-231ENST00000629717 ABCB7O75027 752 aa15.79■□□□□ 0.12
NRXN1-231ENST00000629717 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
NRXN1-231ENST00000629717 ATF5Q9Y2D1 282 aaPredicted RBP15.77■□□□□ 0.12
NRXN1-231ENST00000629717 IFT140Q96RY7 1462 aa15.74■□□□□ 0.11
NRXN1-231ENST00000629717 DNMBPQ6XZF7 1577 aa15.74■□□□□ 0.11
NRXN1-231ENST00000629717 ATXN8OSP0DMR3 200 aa15.68■□□□□ 0.1
NRXN1-231ENST00000629717 ZNF608Q9ULD9 1512 aaPredicted RBP15.68■□□□□ 0.1
NRXN1-231ENST00000629717 POLA1P09884 1462 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms