RNA–Protein interactions for RNA: ENST00000626583.2

LINC01828-208, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 848 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-208ENST00000626583 AEBP2Q6ZN18 517 aaPredicted RBP15.83■□□□□ 0.12
LINC01828-208ENST00000626583 CHIC1Q5VXU3 224 aa14.87□□□□□ -0.03
LINC01828-208ENST00000626583 SENP3Q9H4L4 574 aaPredicted RBP13.67□□□□□ -0.22
LINC01828-208ENST00000626583 PHF23Q9BUL5 403 aaPredicted RBP13.36□□□□□ -0.27
LINC01828-208ENST00000626583 FOXD1Q16676 465 aa12.73□□□□□ -0.37
LINC01828-208ENST00000626583 POTEDQ86YR6 584 aa12.55□□□□□ -0.4
LINC01828-208ENST00000626583 MSH5O43196 834 aa12.18□□□□□ -0.46
LINC01828-208ENST00000626583 PIAS4Q8N2W9 510 aaPredicted RBP11.75□□□□□ -0.53
LINC01828-208ENST00000626583 PLPPR3Q6T4P5 718 aa11.54□□□□□ -0.56
LINC01828-208ENST00000626583 PPP6R1Q9UPN7 881 aa11.51□□□□□ -0.57
LINC01828-208ENST00000626583 ADRA2BP18089 450 aa11.4□□□□□ -0.58
LINC01828-208ENST00000626583 DMRT2Q9Y5R5 561 aa10.77□□□□□ -0.69
LINC01828-208ENST00000626583 SCAF1Q9H7N4 1312 aaKnown RBP10.6□□□□□ -0.71
LINC01828-208ENST00000626583 MAPK8IP2Q13387 824 aaPredicted RBP10.6□□□□□ -0.71
LINC01828-208ENST00000626583 CACNB1Q02641 598 aaPredicted RBP10.59□□□□□ -0.71
LINC01828-208ENST00000626583 DNAJC5BQ9UF47 199 aa10.44□□□□□ -0.74
LINC01828-208ENST00000626583 RNF39Q9H2S5 420 aa10.32□□□□□ -0.76
LINC01828-208ENST00000626583 HOXD11P31277 338 aaPredicted RBP10.24□□□□□ -0.77
LINC01828-208ENST00000626583 DNAJC5Q9H3Z4 198 aa10.2□□□□□ -0.78
LINC01828-208ENST00000626583 C1QBPQ07021 282 aaKnown RBP10.19□□□□□ -0.78
LINC01828-208ENST00000626583 DCAF8L1A6NGE4 600 aa10.13□□□□□ -0.79
LINC01828-208ENST00000626583 ABCC9O60706 1549 aa10.06□□□□□ -0.8
LINC01828-208ENST00000626583 RNF216Q9NWF9 866 aaPredicted RBP10.03□□□□□ -0.8
LINC01828-208ENST00000626583 PPP4R3CPQ6ZMV5 832 aa9.99□□□□□ -0.81
LINC01828-208ENST00000626583 CNKSR2Q8WXI2 1034 aa9.98□□□□□ -0.81
LINC01828-208ENST00000626583 POTEHQ6S545 545 aa9.75□□□□□ -0.85
LINC01828-208ENST00000626583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.61□□□□□ -0.87
LINC01828-208ENST00000626583 NISCHQ9Y2I1 1504 aa9.53□□□□□ -0.88
LINC01828-208ENST00000626583 NCBP3Q53F19 620 aaKnown RBP9.53□□□□□ -0.88
LINC01828-208ENST00000626583 DSG3P32926 999 aa9.48□□□□□ -0.89
LINC01828-208ENST00000626583 U3KPZ7 1027 aaPredicted RBP9.4□□□□□ -0.9
LINC01828-208ENST00000626583 NPM3O75607 178 aaKnown RBP9.34□□□□□ -0.91
LINC01828-208ENST00000626583 TRIM41Q8WV44 630 aa9.34□□□□□ -0.91
LINC01828-208ENST00000626583 CAPN15O75808 1086 aa9.33□□□□□ -0.92
LINC01828-208ENST00000626583 SPINK5Q9NQ38 1064 aaPredicted RBP9.33□□□□□ -0.92
LINC01828-208ENST00000626583 APLP2Q06481 763 aa9.21□□□□□ -0.94
LINC01828-208ENST00000626583 PABPN1Q86U42 306 aaKnown RBP eCLIP9.18□□□□□ -0.94
LINC01828-208ENST00000626583 ZNF219Q9P2Y4 722 aaPredicted RBP9.17□□□□□ -0.94
LINC01828-208ENST00000626583 UNC13AQ9UPW8 1703 aa9.14□□□□□ -0.95
LINC01828-208ENST00000626583 RBM42Q9BTD8 480 aaKnown RBP9.12□□□□□ -0.95
LINC01828-208ENST00000626583 CECR2Q9BXF3 1484 aa9.12□□□□□ -0.95
LINC01828-208ENST00000626583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.09□□□□□ -0.95
LINC01828-208ENST00000626583 HNRNPUL2Q1KMD3 747 aaKnown RBP9.09□□□□□ -0.95
LINC01828-208ENST00000626583 CC2D2AQ9P2K1 1620 aa9.07□□□□□ -0.96
LINC01828-208ENST00000626583 TRHP20396 242 aaPredicted RBP9.05□□□□□ -0.96
LINC01828-208ENST00000626583 RB1CC1Q8TDY2 1594 aa9.04□□□□□ -0.96
LINC01828-208ENST00000626583 SLC4A2P04920 1241 aa9.04□□□□□ -0.96
LINC01828-208ENST00000626583 CCDC180Q9P1Z9 1646 aa9.03□□□□□ -0.96
LINC01828-208ENST00000626583 ABCB7O75027 752 aa9.02□□□□□ -0.97
LINC01828-208ENST00000626583 CHRDL2Q6WN34 429 aa9.02□□□□□ -0.97
LINC01828-208ENST00000626583 CUX2O14529 1486 aa8.99□□□□□ -0.97
LINC01828-208ENST00000626583 SAMD1Q6SPF0 538 aaPredicted RBP8.98□□□□□ -0.97
LINC01828-208ENST00000626583 ILDR1Q86SU0 546 aaPredicted RBP8.98□□□□□ -0.97
LINC01828-208ENST00000626583 BICRAQ9NZM4 1560 aa8.98□□□□□ -0.97
LINC01828-208ENST00000626583 SP7Q8TDD2 431 aaPredicted RBP8.95□□□□□ -0.98
LINC01828-208ENST00000626583 AKT1S1Q96B36 256 aa8.81□□□□□ -1
LINC01828-208ENST00000626583 POLA2Q14181 598 aa8.76□□□□□ -1.01
LINC01828-208ENST00000626583 EIF4G1Q04637 1599 aaKnown RBP8.75□□□□□ -1.01
LINC01828-208ENST00000626583 NACADO15069 1562 aa8.71□□□□□ -1.02
LINC01828-208ENST00000626583 MYCNP04198 464 aaPredicted RBP8.7□□□□□ -1.02
LINC01828-208ENST00000626583 KCNA4P22459 653 aa8.7□□□□□ -1.02
LINC01828-208ENST00000626583 PIP4P2Q8N4L2 257 aa8.7□□□□□ -1.02
LINC01828-208ENST00000626583 ZBTB12Q9Y330 459 aaPredicted RBP8.69□□□□□ -1.02
LINC01828-208ENST00000626583 REM2Q8IYK8 340 aaPredicted RBP8.66□□□□□ -1.02
LINC01828-208ENST00000626583 ERCC6Q03468 1493 aa8.65□□□□□ -1.02
LINC01828-208ENST00000626583 FXR2P51116 673 aaKnown RBP eCLIP8.65□□□□□ -1.02
LINC01828-208ENST00000626583 HAX1O00165 279 aa8.6□□□□□ -1.03
LINC01828-208ENST00000626583 RIMBP3CA6NJZ7 1639 aa8.58□□□□□ -1.04
LINC01828-208ENST00000626583 RIMBP3BA6NNM3 1639 aa8.58□□□□□ -1.04
LINC01828-208ENST00000626583 RIMBP3Q9UFD9 1639 aa8.58□□□□□ -1.04
LINC01828-208ENST00000626583 PITPNM1O00562 1244 aa8.55□□□□□ -1.04
LINC01828-208ENST00000626583 THOC2Q8NI27 1593 aaKnown RBP8.53□□□□□ -1.04
LINC01828-208ENST00000626583 SHROOM4Q9ULL8 1493 aa8.48□□□□□ -1.05
LINC01828-208ENST00000626583 BAZ1AQ9NRL2 1556 aaPredicted RBP8.48□□□□□ -1.05
LINC01828-208ENST00000626583 OSCARQ8IYS5 282 aa8.47□□□□□ -1.05
LINC01828-208ENST00000626583 EVX2Q03828 476 aa8.46□□□□□ -1.06
LINC01828-208ENST00000626583 DCAF8L2P0C7V8 631 aa8.42□□□□□ -1.06
LINC01828-208ENST00000626583 ATF5Q9Y2D1 282 aaPredicted RBP8.42□□□□□ -1.06
LINC01828-208ENST00000626583 NESP48681 1621 aa8.4□□□□□ -1.06
LINC01828-208ENST00000626583 C19orf67A6NJJ6 358 aa8.38□□□□□ -1.07
LINC01828-208ENST00000626583 ARHGEF11O15085 1522 aa8.36□□□□□ -1.07
LINC01828-208ENST00000626583 LHX8Q68G74 356 aa8.36□□□□□ -1.07
LINC01828-208ENST00000626583 ILDR2Q71H61 639 aa8.36□□□□□ -1.07
LINC01828-208ENST00000626583 LMTK3Q96Q04 1460 aa8.36□□□□□ -1.07
LINC01828-208ENST00000626583 SPDYE2BA6NHP3 402 aa8.35□□□□□ -1.07
LINC01828-208ENST00000626583 SPDYE6P0CI01 402 aa8.35□□□□□ -1.07
LINC01828-208ENST00000626583 SPDYE2Q495Y8 402 aa8.35□□□□□ -1.07
LINC01828-208ENST00000626583 SOCS7O14512 581 aa8.34□□□□□ -1.07
LINC01828-208ENST00000626583 FOXD4L1Q9NU39 408 aa8.34□□□□□ -1.07
LINC01828-208ENST00000626583 KIF21AQ7Z4S6 1674 aa8.33□□□□□ -1.08
LINC01828-208ENST00000626583 SMARCA2P51531 1590 aa8.32□□□□□ -1.08
LINC01828-208ENST00000626583 CYB5RLQ6IPT4 315 aa8.31□□□□□ -1.08
LINC01828-208ENST00000626583 GABBR2O75899 941 aa8.3□□□□□ -1.08
LINC01828-208ENST00000626583 PRKAR2AP13861 404 aaKnown RBP8.3□□□□□ -1.08
LINC01828-208ENST00000626583 SPDYE1Q8NFV5 336 aaPredicted RBP8.29□□□□□ -1.08
LINC01828-208ENST00000626583 ATXN8OSP0DMR3 200 aa8.24□□□□□ -1.09
LINC01828-208ENST00000626583 CLCN6P51797 869 aa8.24□□□□□ -1.09
LINC01828-208ENST00000626583 ARAP1Q96P48 1450 aa8.23□□□□□ -1.09
LINC01828-208ENST00000626583 SCRIBQ14160 1630 aa8.22□□□□□ -1.09
LINC01828-208ENST00000626583 FBXO41Q8TF61 875 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms