RNA–Protein interactions for RNA: ENST00000626425.2

TCF4-252, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-252ENST00000626425 AEBP2Q6ZN18 517 aaPredicted RBP25.06■■□□□ 1.6
TCF4-252ENST00000626425 CHIC1Q5VXU3 224 aa24.23■■□□□ 1.47
TCF4-252ENST00000626425 SENP3Q9H4L4 574 aaPredicted RBP21.31■■□□□ 1
TCF4-252ENST00000626425 PHF23Q9BUL5 403 aaPredicted RBP21.29■■□□□ 1
TCF4-252ENST00000626425 FOXD1Q16676 465 aa19.81■□□□□ 0.76
TCF4-252ENST00000626425 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
TCF4-252ENST00000626425 NISCHQ9Y2I1 1504 aa19.33■□□□□ 0.68
TCF4-252ENST00000626425 ADRA2BP18089 450 aa18.88■□□□□ 0.61
TCF4-252ENST00000626425 PPP6R1Q9UPN7 881 aa18.88■□□□□ 0.61
TCF4-252ENST00000626425 PIAS4Q8N2W9 510 aaPredicted RBP18.65■□□□□ 0.58
TCF4-252ENST00000626425 MSH5O43196 834 aa18.35■□□□□ 0.53
TCF4-252ENST00000626425 CCDC180Q9P1Z9 1646 aa17.33■□□□□ 0.37
TCF4-252ENST00000626425 SCAF1Q9H7N4 1312 aaKnown RBP17.26■□□□□ 0.35
TCF4-252ENST00000626425 PPP4R3CPQ6ZMV5 832 aa17.24■□□□□ 0.35
TCF4-252ENST00000626425 MAPK8IP2Q13387 824 aaPredicted RBP17.21■□□□□ 0.35
TCF4-252ENST00000626425 ABCC9O60706 1549 aa17.2■□□□□ 0.34
TCF4-252ENST00000626425 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
TCF4-252ENST00000626425 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
TCF4-252ENST00000626425 CNKSR2Q8WXI2 1034 aa16.8■□□□□ 0.28
TCF4-252ENST00000626425 NCBP3Q53F19 620 aaKnown RBP16.72■□□□□ 0.27
TCF4-252ENST00000626425 KCNA4P22459 653 aa16.57■□□□□ 0.24
TCF4-252ENST00000626425 RNF216Q9NWF9 866 aaPredicted RBP16.52■□□□□ 0.24
TCF4-252ENST00000626425 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
TCF4-252ENST00000626425 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
TCF4-252ENST00000626425 RB1CC1Q8TDY2 1594 aa16.45■□□□□ 0.22
TCF4-252ENST00000626425 NACADO15069 1562 aa16.38■□□□□ 0.21
TCF4-252ENST00000626425 DCAF8L1A6NGE4 600 aa16.34■□□□□ 0.21
TCF4-252ENST00000626425 MYO15BQ96JP2 1530 aa16.23■□□□□ 0.19
TCF4-252ENST00000626425 DCAF8L2P0C7V8 631 aa16.19■□□□□ 0.18
TCF4-252ENST00000626425 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
TCF4-252ENST00000626425 UNC13AQ9UPW8 1703 aa16.07■□□□□ 0.16
TCF4-252ENST00000626425 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
TCF4-252ENST00000626425 DCAF1Q9Y4B6 1507 aa16.02■□□□□ 0.15
TCF4-252ENST00000626425 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
TCF4-252ENST00000626425 BICRAQ9NZM4 1560 aa15.97■□□□□ 0.15
TCF4-252ENST00000626425 SHROOM4Q9ULL8 1493 aa15.82■□□□□ 0.12
TCF4-252ENST00000626425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.8■□□□□ 0.12
TCF4-252ENST00000626425 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
TCF4-252ENST00000626425 SCRIBQ14160 1630 aa15.72■□□□□ 0.11
TCF4-252ENST00000626425 RNF39Q9H2S5 420 aa15.7■□□□□ 0.1
TCF4-252ENST00000626425 SLC4A2P04920 1241 aa15.6■□□□□ 0.09
TCF4-252ENST00000626425 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
TCF4-252ENST00000626425 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
TCF4-252ENST00000626425 CACNB1Q02641 598 aaPredicted RBP15.53■□□□□ 0.08
TCF4-252ENST00000626425 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.07
TCF4-252ENST00000626425 C1QBPQ07021 282 aaKnown RBP15.5■□□□□ 0.07
TCF4-252ENST00000626425 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
TCF4-252ENST00000626425 FOXD4L1Q9NU39 408 aa15.3■□□□□ 0.04
TCF4-252ENST00000626425 ZBTB22O15209 634 aa15.22■□□□□ 0.03
TCF4-252ENST00000626425 MYCNP04198 464 aaPredicted RBP15.21■□□□□ 0.03
TCF4-252ENST00000626425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
TCF4-252ENST00000626425 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
TCF4-252ENST00000626425 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
TCF4-252ENST00000626425 SAMD1Q6SPF0 538 aaPredicted RBP15.13■□□□□ 0.01
TCF4-252ENST00000626425 NCAPD3P42695 1498 aa15.13■□□□□ 0.01
TCF4-252ENST00000626425 CAPN15O75808 1086 aa15.11■□□□□ 0.01
TCF4-252ENST00000626425 APLP2Q06481 763 aa15.1■□□□□ 0.01
TCF4-252ENST00000626425 ATAD2BQ9ULI0 1458 aa15.06■□□□□ 0
TCF4-252ENST00000626425 SMARCA4P51532 1647 aa15.06■□□□□ 0
TCF4-252ENST00000626425 EHMT2Q96KQ7 1210 aa15.05■□□□□ -0
TCF4-252ENST00000626425 SMARCA2P51531 1590 aa15.03■□□□□ -0
TCF4-252ENST00000626425 HMGXB3Q12766 1538 aa15.02□□□□□ -0.01
TCF4-252ENST00000626425 BAZ1AQ9NRL2 1556 aaPredicted RBP15□□□□□ -0.01
TCF4-252ENST00000626425 TRHP20396 242 aaPredicted RBP14.99□□□□□ -0.01
TCF4-252ENST00000626425 PEG3Q9GZU2 1588 aa14.96□□□□□ -0.01
TCF4-252ENST00000626425 CSRNP3Q8WYN3 585 aa14.94□□□□□ -0.02
TCF4-252ENST00000626425 ZNF219Q9P2Y4 722 aaPredicted RBP14.92□□□□□ -0.02
TCF4-252ENST00000626425 BAZ1BQ9UIG0 1483 aaKnown RBP14.9□□□□□ -0.02
TCF4-252ENST00000626425 MROH2BQ7Z745 1585 aa14.87□□□□□ -0.03
TCF4-252ENST00000626425 DSG3P32926 999 aa14.87□□□□□ -0.03
TCF4-252ENST00000626425 CUX2O14529 1486 aa14.86□□□□□ -0.03
TCF4-252ENST00000626425 ERCC6Q03468 1493 aa14.84□□□□□ -0.03
TCF4-252ENST00000626425 ATF5Q9Y2D1 282 aaPredicted RBP14.84□□□□□ -0.03
TCF4-252ENST00000626425 ABCB7O75027 752 aa14.8□□□□□ -0.04
TCF4-252ENST00000626425 NESP48681 1621 aa14.8□□□□□ -0.04
TCF4-252ENST00000626425 DNAJC5Q9H3Z4 198 aa14.77□□□□□ -0.05
TCF4-252ENST00000626425 ATXN8OSP0DMR3 200 aa14.76□□□□□ -0.05
TCF4-252ENST00000626425 LAMC3Q9Y6N6 1575 aa14.76□□□□□ -0.05
TCF4-252ENST00000626425 WIZO95785 1651 aa14.68□□□□□ -0.06
TCF4-252ENST00000626425 POLA2Q14181 598 aa14.68□□□□□ -0.06
TCF4-252ENST00000626425 THOC2Q8NI27 1593 aaKnown RBP14.67□□□□□ -0.06
TCF4-252ENST00000626425 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
TCF4-252ENST00000626425 CADPSQ9ULU8 1353 aa14.65□□□□□ -0.06
TCF4-252ENST00000626425 KIF21AQ7Z4S6 1674 aa14.62□□□□□ -0.07
TCF4-252ENST00000626425 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
TCF4-252ENST00000626425 TOP2AP11388 1531 aaKnown RBP14.53□□□□□ -0.08
TCF4-252ENST00000626425 MRC2Q9UBG0 1479 aa14.52□□□□□ -0.08
TCF4-252ENST00000626425 CFTRP13569 1480 aa14.5□□□□□ -0.09
TCF4-252ENST00000626425 WDR62O43379 1518 aa14.5□□□□□ -0.09
TCF4-252ENST00000626425 FANCD2Q9BXW9 1451 aa14.46□□□□□ -0.09
TCF4-252ENST00000626425 CEP164Q9UPV0 1460 aa14.46□□□□□ -0.09
TCF4-252ENST00000626425 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
TCF4-252ENST00000626425 CCDC88BA6NC98 1476 aa14.36□□□□□ -0.11
TCF4-252ENST00000626425 PRDM2Q13029 1718 aa14.35□□□□□ -0.11
TCF4-252ENST00000626425 URB2Q14146 1524 aaKnown RBP14.34□□□□□ -0.11
TCF4-252ENST00000626425 FBLN2P98095 1184 aa14.25□□□□□ -0.13
TCF4-252ENST00000626425 ABCC8Q09428 1581 aa14.21□□□□□ -0.14
TCF4-252ENST00000626425 TOPBP1Q92547 1522 aa14.2□□□□□ -0.14
TCF4-252ENST00000626425 IFT140Q96RY7 1462 aa14.19□□□□□ -0.14
TCF4-252ENST00000626425 OSCARQ8IYS5 282 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms