RNA–Protein interactions for RNA: ENST00000611036.1

ESRRB-208, Transcript of estrogen related receptor beta, humanhuman

Gene ESRRB, Length 2,190 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRB-208ENST00000611036 NISCHQ9Y2I1 1504 aa29.33■■■□□ 2.29
ESRRB-208ENST00000611036 CCDC180Q9P1Z9 1646 aa24.95■■□□□ 1.58
ESRRB-208ENST00000611036 SHROOM4Q9ULL8 1493 aa24.86■■□□□ 1.57
ESRRB-208ENST00000611036 ZCCHC6Q5VYS8 1495 aaKnown RBP24.84■■□□□ 1.57
ESRRB-208ENST00000611036 SUPT5HO00267 1087 aaKnown RBP24.45■■□□□ 1.5
ESRRB-208ENST00000611036 DCAF1Q9Y4B6 1507 aa24.16■■□□□ 1.46
ESRRB-208ENST00000611036 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.45
ESRRB-208ENST00000611036 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
ESRRB-208ENST00000611036 MYO15BQ96JP2 1530 aa23.79■■□□□ 1.4
ESRRB-208ENST00000611036 ABCC9O60706 1549 aa23.45■■□□□ 1.34
ESRRB-208ENST00000611036 HRCP23327 699 aa23.34■■□□□ 1.33
ESRRB-208ENST00000611036 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
ESRRB-208ENST00000611036 RSF1Q96T23 1441 aaPredicted RBP23.21■■□□□ 1.31
ESRRB-208ENST00000611036 PCGF6Q9BYE7 350 aa23.18■■□□□ 1.3
ESRRB-208ENST00000611036 LOC105371045A0A1W2PR82 267 aa23.11■■□□□ 1.29
ESRRB-208ENST00000611036 NACADO15069 1562 aa23.04■■□□□ 1.28
ESRRB-208ENST00000611036 RB1CC1Q8TDY2 1594 aa23.02■■□□□ 1.27
ESRRB-208ENST00000611036 TRIM41Q8WV44 630 aa22.85■■□□□ 1.25
ESRRB-208ENST00000611036 TRIM26Q12899 539 aaPredicted RBP22.84■■□□□ 1.25
ESRRB-208ENST00000611036 CECR2Q9BXF3 1484 aa22.79■■□□□ 1.24
ESRRB-208ENST00000611036 MROH2BQ7Z745 1585 aa22.75■■□□□ 1.23
ESRRB-208ENST00000611036 PPARGC1BQ86YN6 1023 aaKnown RBP22.7■■□□□ 1.22
ESRRB-208ENST00000611036 WIZO95785 1651 aa22.62■■□□□ 1.21
ESRRB-208ENST00000611036 BAZ1AQ9NRL2 1556 aaPredicted RBP22.56■■□□□ 1.2
ESRRB-208ENST00000611036 FAM9AQ8IZU1 332 aaPredicted RBP22.55■■□□□ 1.2
ESRRB-208ENST00000611036 ZEB1P37275 1124 aaPredicted RBP22.44■■□□□ 1.18
ESRRB-208ENST00000611036 EIF4G1Q04637 1599 aaKnown RBP22.43■■□□□ 1.18
ESRRB-208ENST00000611036 TOP2AP11388 1531 aaKnown RBP22.34■■□□□ 1.17
ESRRB-208ENST00000611036 SMARCA4P51532 1647 aa22.3■■□□□ 1.16
ESRRB-208ENST00000611036 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
ESRRB-208ENST00000611036 UNC13AQ9UPW8 1703 aa22.21■■□□□ 1.15
ESRRB-208ENST00000611036 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
ESRRB-208ENST00000611036 SMARCA2P51531 1590 aa22.19■■□□□ 1.14
ESRRB-208ENST00000611036 ABCC8Q09428 1581 aa22.11■■□□□ 1.13
ESRRB-208ENST00000611036 WRNQ14191 1432 aaPredicted RBP eCLIP22■■□□□ 1.11
ESRRB-208ENST00000611036 EEA1Q15075 1411 aa21.99■■□□□ 1.11
ESRRB-208ENST00000611036 BICRAQ9NZM4 1560 aa21.96■■□□□ 1.11
ESRRB-208ENST00000611036 PEG3Q9GZU2 1588 aa21.94■■□□□ 1.1
ESRRB-208ENST00000611036 SOGA1O94964 1423 aa21.94■■□□□ 1.1
ESRRB-208ENST00000611036 TNIKQ9UKE5 1360 aa21.93■■□□□ 1.1
ESRRB-208ENST00000611036 CEP162Q5TB80 1403 aa21.92■■□□□ 1.1
ESRRB-208ENST00000611036 CSRNP3Q8WYN3 585 aa21.87■■□□□ 1.09
ESRRB-208ENST00000611036 PABPN1Q86U42 306 aaKnown RBP eCLIP21.85■■□□□ 1.09
ESRRB-208ENST00000611036 RUSC2Q8N2Y8 1516 aa21.8■■□□□ 1.08
ESRRB-208ENST00000611036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.8■■□□□ 1.08
ESRRB-208ENST00000611036 CCER1Q8TC90 406 aaPredicted RBP21.8■■□□□ 1.08
ESRRB-208ENST00000611036 GOLGA3Q08378 1498 aa21.78■■□□□ 1.08
ESRRB-208ENST00000611036 UBTFP17480 764 aaKnown RBP21.72■■□□□ 1.07
ESRRB-208ENST00000611036 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
ESRRB-208ENST00000611036 SYNJ1O43426 1573 aa21.67■■□□□ 1.06
ESRRB-208ENST00000611036 CEP164Q9UPV0 1460 aa21.66■■□□□ 1.06
ESRRB-208ENST00000611036 KIF21BO75037 1637 aa21.65■■□□□ 1.06
ESRRB-208ENST00000611036 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.06
ESRRB-208ENST00000611036 TTBK1Q5TCY1 1321 aaPredicted RBP21.59■■□□□ 1.05
ESRRB-208ENST00000611036 CLIP1P30622 1438 aa21.5■■□□□ 1.03
ESRRB-208ENST00000611036 SCAF1Q9H7N4 1312 aaKnown RBP21.49■■□□□ 1.03
ESRRB-208ENST00000611036 TOP2BQ02880 1626 aa21.46■■□□□ 1.03
ESRRB-208ENST00000611036 VPS8Q8N3P4 1428 aa21.45■■□□□ 1.02
ESRRB-208ENST00000611036 DIEXFQ68CQ4 756 aaKnown RBP21.43■■□□□ 1.02
ESRRB-208ENST00000611036 RAPGEF2Q9Y4G8 1499 aa21.42■■□□□ 1.02
ESRRB-208ENST00000611036 BIVM-ERCC5R4GMW8 1640 aa21.38■■□□□ 1.01
ESRRB-208ENST00000611036 ACIN1Q9UKV3 1341 aaKnown RBP21.33■■□□□ 1
ESRRB-208ENST00000611036 HMGXB3Q12766 1538 aa21.32■■□□□ 1
ESRRB-208ENST00000611036 NCAPD3P42695 1498 aa21.31■■□□□ 1
ESRRB-208ENST00000611036 APLP2Q06481 763 aa21.31■■□□□ 1
ESRRB-208ENST00000611036 ERICH3Q5RHP9 1530 aa21.31■■□□□ 1
ESRRB-208ENST00000611036 PELP1Q8IZL8 1130 aaKnown RBP21.29■■□□□ 1
ESRRB-208ENST00000611036 ZNF316A6NFI3 1004 aaPredicted RBP21.29■■□□□ 1
ESRRB-208ENST00000611036 PRXQ9BXM0 1461 aa21.27■■□□□ 1
ESRRB-208ENST00000611036 HNRNPUL2Q1KMD3 747 aaKnown RBP21.26■□□□□ 0.99
ESRRB-208ENST00000611036 NEUROD1Q13562 356 aa21.23■□□□□ 0.99
ESRRB-208ENST00000611036 CENPBP07199 599 aaPredicted RBP21.23■□□□□ 0.99
ESRRB-208ENST00000611036 CUX1P39880 1505 aa21.19■□□□□ 0.98
ESRRB-208ENST00000611036 CFTRP13569 1480 aa21.15■□□□□ 0.98
ESRRB-208ENST00000611036 ARAP1Q96P48 1450 aa21.15■□□□□ 0.98
ESRRB-208ENST00000611036 KIF27Q86VH2 1401 aa21.15■□□□□ 0.98
ESRRB-208ENST00000611036 RANGAP1P46060 587 aaPredicted RBP21.14■□□□□ 0.98
ESRRB-208ENST00000611036 CLSPNQ9HAW4 1339 aa21.06■□□□□ 0.96
ESRRB-208ENST00000611036 GTF3C3Q9Y5Q9 886 aa21.03■□□□□ 0.96
ESRRB-208ENST00000611036 PRDM2Q13029 1718 aa20.99■□□□□ 0.95
ESRRB-208ENST00000611036 KANK4Q5T7N3 995 aaPredicted RBP20.99■□□□□ 0.95
ESRRB-208ENST00000611036 RRBP1Q9P2E9 1410 aaKnown RBP20.99■□□□□ 0.95
ESRRB-208ENST00000611036 DHX57Q6P158 1386 aaKnown RBP20.96■□□□□ 0.95
ESRRB-208ENST00000611036 ARHGAP35Q9NRY4 1499 aa20.96■□□□□ 0.95
ESRRB-208ENST00000611036 MIER1Q8N108 512 aa20.93■□□□□ 0.94
ESRRB-208ENST00000611036 CUX2O14529 1486 aa20.9■□□□□ 0.94
ESRRB-208ENST00000611036 IGF1RP08069 1367 aa20.88■□□□□ 0.93
ESRRB-208ENST00000611036 CADPSQ9ULU8 1353 aa20.88■□□□□ 0.93
ESRRB-208ENST00000611036 CCNB3Q8WWL7 1395 aa20.86■□□□□ 0.93
ESRRB-208ENST00000611036 MAP3K1Q13233 1512 aa20.83■□□□□ 0.93
ESRRB-208ENST00000611036 YTHDC1Q96MU7 727 aaKnown RBP20.82■□□□□ 0.92
ESRRB-208ENST00000611036 CARMIL1Q5VZK9 1371 aa20.79■□□□□ 0.92
ESRRB-208ENST00000611036 FGD5Q6ZNL6 1462 aa20.79■□□□□ 0.92
ESRRB-208ENST00000611036 TIAM1Q13009 1591 aa20.76■□□□□ 0.91
ESRRB-208ENST00000611036 FHAD1B1AJZ9 1412 aa20.69■□□□□ 0.9
ESRRB-208ENST00000611036 LRRC9Q6ZRR7 1453 aa20.68■□□□□ 0.9
ESRRB-208ENST00000611036 FANCD2Q9BXW9 1451 aa20.66■□□□□ 0.9
ESRRB-208ENST00000611036 RAB3GAP2Q9H2M9 1393 aa20.65■□□□□ 0.9
ESRRB-208ENST00000611036 CC2D2AQ9P2K1 1620 aa20.65■□□□□ 0.9
ESRRB-208ENST00000611036 ITGAEP38570 1179 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms