RNA–Protein interactions for RNA: ENST00000609304.5

LINC02028-217, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 5

Gene LINC02028, Length 769 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-217ENST00000609304 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
LINC02028-217ENST00000609304 AEBP2Q6ZN18 517 aaPredicted RBP16.89■□□□□ 0.29
LINC02028-217ENST00000609304 NISCHQ9Y2I1 1504 aa15.21■□□□□ 0.03
LINC02028-217ENST00000609304 PHF23Q9BUL5 403 aaPredicted RBP15.16■□□□□ 0.02
LINC02028-217ENST00000609304 PLPPR3Q6T4P5 718 aa14.1□□□□□ -0.15
LINC02028-217ENST00000609304 SENP3Q9H4L4 574 aaPredicted RBP14.09□□□□□ -0.15
LINC02028-217ENST00000609304 ABCC9O60706 1549 aa13.95□□□□□ -0.18
LINC02028-217ENST00000609304 CCDC180Q9P1Z9 1646 aa13.6□□□□□ -0.23
LINC02028-217ENST00000609304 ADRA2BP18089 450 aa13.34□□□□□ -0.27
LINC02028-217ENST00000609304 DNAJC5BQ9UF47 199 aa13.3□□□□□ -0.28
LINC02028-217ENST00000609304 PPP6R1Q9UPN7 881 aa13.18□□□□□ -0.3
LINC02028-217ENST00000609304 DCAF8L2P0C7V8 631 aa13.1□□□□□ -0.31
LINC02028-217ENST00000609304 FOXD1Q16676 465 aa13.1□□□□□ -0.31
LINC02028-217ENST00000609304 KCNA4P22459 653 aa13.08□□□□□ -0.32
LINC02028-217ENST00000609304 RB1CC1Q8TDY2 1594 aa13.07□□□□□ -0.32
LINC02028-217ENST00000609304 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC02028-217ENST00000609304 EHMT2Q96KQ7 1210 aa13□□□□□ -0.33
LINC02028-217ENST00000609304 NACADO15069 1562 aa12.93□□□□□ -0.34
LINC02028-217ENST00000609304 UNC13AQ9UPW8 1703 aa12.82□□□□□ -0.36
LINC02028-217ENST00000609304 BICRAQ9NZM4 1560 aa12.76□□□□□ -0.37
LINC02028-217ENST00000609304 MYO15BQ96JP2 1530 aa12.64□□□□□ -0.39
LINC02028-217ENST00000609304 PPP4R3CPQ6ZMV5 832 aa12.57□□□□□ -0.4
LINC02028-217ENST00000609304 ZCCHC6Q5VYS8 1495 aaKnown RBP12.54□□□□□ -0.4
LINC02028-217ENST00000609304 SCRIBQ14160 1630 aa12.53□□□□□ -0.4
LINC02028-217ENST00000609304 CSRNP3Q8WYN3 585 aa12.52□□□□□ -0.41
LINC02028-217ENST00000609304 SLC4A1APQ9BWU0 796 aaKnown RBP12.52□□□□□ -0.41
LINC02028-217ENST00000609304 CECR2Q9BXF3 1484 aa12.52□□□□□ -0.41
LINC02028-217ENST00000609304 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
LINC02028-217ENST00000609304 PIAS4Q8N2W9 510 aaPredicted RBP12.48□□□□□ -0.41
LINC02028-217ENST00000609304 DCAF1Q9Y4B6 1507 aa12.45□□□□□ -0.42
LINC02028-217ENST00000609304 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
LINC02028-217ENST00000609304 SHROOM4Q9ULL8 1493 aa12.39□□□□□ -0.43
LINC02028-217ENST00000609304 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
LINC02028-217ENST00000609304 NPM3O75607 178 aaKnown RBP12.26□□□□□ -0.45
LINC02028-217ENST00000609304 DNAJC5Q9H3Z4 198 aa12.22□□□□□ -0.45
LINC02028-217ENST00000609304 ZBTB22O15209 634 aa12.07□□□□□ -0.48
LINC02028-217ENST00000609304 CNKSR2Q8WXI2 1034 aa12.02□□□□□ -0.49
LINC02028-217ENST00000609304 ERCC6Q03468 1493 aa11.99□□□□□ -0.49
LINC02028-217ENST00000609304 NCAPD3P42695 1498 aa11.98□□□□□ -0.49
LINC02028-217ENST00000609304 NESP48681 1621 aa11.96□□□□□ -0.5
LINC02028-217ENST00000609304 ATAD2BQ9ULI0 1458 aa11.95□□□□□ -0.5
LINC02028-217ENST00000609304 CUX2O14529 1486 aa11.94□□□□□ -0.5
LINC02028-217ENST00000609304 SCAF1Q9H7N4 1312 aaKnown RBP11.9□□□□□ -0.5
LINC02028-217ENST00000609304 SMARCA4P51532 1647 aa11.88□□□□□ -0.51
LINC02028-217ENST00000609304 SMARCA2P51531 1590 aa11.84□□□□□ -0.51
LINC02028-217ENST00000609304 HMGXB3Q12766 1538 aa11.82□□□□□ -0.52
LINC02028-217ENST00000609304 BAZ1BQ9UIG0 1483 aaKnown RBP11.82□□□□□ -0.52
LINC02028-217ENST00000609304 MAPK8IP2Q13387 824 aaPredicted RBP11.81□□□□□ -0.52
LINC02028-217ENST00000609304 MROH2BQ7Z745 1585 aa11.78□□□□□ -0.52
LINC02028-217ENST00000609304 BAZ1AQ9NRL2 1556 aaPredicted RBP11.77□□□□□ -0.53
LINC02028-217ENST00000609304 FOXD4L1Q9NU39 408 aa11.77□□□□□ -0.53
LINC02028-217ENST00000609304 THOC2Q8NI27 1593 aaKnown RBP11.74□□□□□ -0.53
LINC02028-217ENST00000609304 KIF21AQ7Z4S6 1674 aa11.71□□□□□ -0.53
LINC02028-217ENST00000609304 TRIM41Q8WV44 630 aa11.71□□□□□ -0.53
LINC02028-217ENST00000609304 MSH5O43196 834 aa11.7□□□□□ -0.54
LINC02028-217ENST00000609304 PEG3Q9GZU2 1588 aa11.7□□□□□ -0.54
LINC02028-217ENST00000609304 LAMC3Q9Y6N6 1575 aa11.69□□□□□ -0.54
LINC02028-217ENST00000609304 PDS5BQ9NTI5 1447 aa11.67□□□□□ -0.54
LINC02028-217ENST00000609304 CADPSQ9ULU8 1353 aa11.65□□□□□ -0.55
LINC02028-217ENST00000609304 WIZO95785 1651 aa11.62□□□□□ -0.55
LINC02028-217ENST00000609304 RNF216Q9NWF9 866 aaPredicted RBP11.61□□□□□ -0.55
LINC02028-217ENST00000609304 MRC2Q9UBG0 1479 aa11.59□□□□□ -0.55
LINC02028-217ENST00000609304 WDR62O43379 1518 aa11.53□□□□□ -0.56
LINC02028-217ENST00000609304 FANCD2Q9BXW9 1451 aa11.51□□□□□ -0.57
LINC02028-217ENST00000609304 CEP164Q9UPV0 1460 aa11.51□□□□□ -0.57
LINC02028-217ENST00000609304 OSCARQ8IYS5 282 aa11.48□□□□□ -0.57
LINC02028-217ENST00000609304 RSF1Q96T23 1441 aaPredicted RBP11.47□□□□□ -0.57
LINC02028-217ENST00000609304 RTN4Q9NQC3 1192 aaKnown RBP11.46□□□□□ -0.57
LINC02028-217ENST00000609304 CFTRP13569 1480 aa11.45□□□□□ -0.58
LINC02028-217ENST00000609304 SLC4A2P04920 1241 aa11.45□□□□□ -0.58
LINC02028-217ENST00000609304 URB2Q14146 1524 aaKnown RBP11.45□□□□□ -0.58
LINC02028-217ENST00000609304 HOXD11P31277 338 aaPredicted RBP11.4□□□□□ -0.58
LINC02028-217ENST00000609304 TOP2AP11388 1531 aaKnown RBP11.4□□□□□ -0.59
LINC02028-217ENST00000609304 DMRT2Q9Y5R5 561 aa11.38□□□□□ -0.59
LINC02028-217ENST00000609304 ZNF608Q9ULD9 1512 aaPredicted RBP11.37□□□□□ -0.59
LINC02028-217ENST00000609304 SLC24A1O60721 1099 aa11.37□□□□□ -0.59
LINC02028-217ENST00000609304 CCDC88BA6NC98 1476 aa11.34□□□□□ -0.59
LINC02028-217ENST00000609304 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
LINC02028-217ENST00000609304 RIMBP3CA6NJZ7 1639 aa11.31□□□□□ -0.6
LINC02028-217ENST00000609304 RIMBP3BA6NNM3 1639 aa11.31□□□□□ -0.6
LINC02028-217ENST00000609304 RIMBP3Q9UFD9 1639 aa11.31□□□□□ -0.6
LINC02028-217ENST00000609304 CYB5RLQ6IPT4 315 aa11.29□□□□□ -0.6
LINC02028-217ENST00000609304 TOPBP1Q92547 1522 aa11.28□□□□□ -0.6
LINC02028-217ENST00000609304 IFT140Q96RY7 1462 aa11.27□□□□□ -0.6
LINC02028-217ENST00000609304 AQRO60306 1485 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC02028-217ENST00000609304 FBLN2P98095 1184 aa11.26□□□□□ -0.61
LINC02028-217ENST00000609304 FKBP8Q14318 412 aa11.26□□□□□ -0.61
LINC02028-217ENST00000609304 MYCNP04198 464 aaPredicted RBP11.25□□□□□ -0.61
LINC02028-217ENST00000609304 ARHGEF11O15085 1522 aa11.25□□□□□ -0.61
LINC02028-217ENST00000609304 PRDM2Q13029 1718 aa11.24□□□□□ -0.61
LINC02028-217ENST00000609304 ATXN8OSP0DMR3 200 aa11.23□□□□□ -0.61
LINC02028-217ENST00000609304 EIF4G3O43432 1585 aaKnown RBP11.21□□□□□ -0.61
LINC02028-217ENST00000609304 TRHP20396 242 aaPredicted RBP11.21□□□□□ -0.61
LINC02028-217ENST00000609304 RAD54L2Q9Y4B4 1467 aa11.19□□□□□ -0.62
LINC02028-217ENST00000609304 CHD1O14646 1710 aa11.18□□□□□ -0.62
LINC02028-217ENST00000609304 TDRD9Q8NDG6 1382 aaKnown RBP11.18□□□□□ -0.62
LINC02028-217ENST00000609304 DNMBPQ6XZF7 1577 aa11.18□□□□□ -0.62
LINC02028-217ENST00000609304 TARBP1Q13395 1621 aaKnown RBP11.17□□□□□ -0.62
LINC02028-217ENST00000609304 POLA1P09884 1462 aaPredicted RBP11.16□□□□□ -0.62
LINC02028-217ENST00000609304 ARAP1Q96P48 1450 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms