RNA–Protein interactions for RNA: ENST00000602744.1

LINC00905-206, long intergenic non-protein coding RNA 905, humanhuman

TSL 3

Gene LINC00905, Length 467 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00905-206ENST00000602744 AEBP2Q6ZN18 517 aaPredicted RBP33.04■■■□□ 2.88
LINC00905-206ENST00000602744 CHIC1Q5VXU3 224 aa31.67■■■□□ 2.66
LINC00905-206ENST00000602744 SENP3Q9H4L4 574 aaPredicted RBP28.13■■■□□ 2.09
LINC00905-206ENST00000602744 PHF23Q9BUL5 403 aaPredicted RBP27.79■■■□□ 2.04
LINC00905-206ENST00000602744 NISCHQ9Y2I1 1504 aa26.74■■□□□ 1.87
LINC00905-206ENST00000602744 FOXD1Q16676 465 aa26.17■■□□□ 1.78
LINC00905-206ENST00000602744 PLPPR3Q6T4P5 718 aa25.41■■□□□ 1.66
LINC00905-206ENST00000602744 ABCC9O60706 1549 aa24.9■■□□□ 1.58
LINC00905-206ENST00000602744 PPP6R1Q9UPN7 881 aa24.69■■□□□ 1.54
LINC00905-206ENST00000602744 ADRA2BP18089 450 aa24.57■■□□□ 1.52
LINC00905-206ENST00000602744 PIAS4Q8N2W9 510 aaPredicted RBP24.46■■□□□ 1.51
LINC00905-206ENST00000602744 MSH5O43196 834 aa24.4■■□□□ 1.5
LINC00905-206ENST00000602744 CCDC180Q9P1Z9 1646 aa24.22■■□□□ 1.47
LINC00905-206ENST00000602744 DNAJC5BQ9UF47 199 aa24■■□□□ 1.43
LINC00905-206ENST00000602744 RB1CC1Q8TDY2 1594 aa23.38■■□□□ 1.33
LINC00905-206ENST00000602744 POTEDQ86YR6 584 aa23.3■■□□□ 1.32
LINC00905-206ENST00000602744 NACADO15069 1562 aa23.09■■□□□ 1.29
LINC00905-206ENST00000602744 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.29
LINC00905-206ENST00000602744 UNC13AQ9UPW8 1703 aa22.79■■□□□ 1.24
LINC00905-206ENST00000602744 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.24
LINC00905-206ENST00000602744 DCAF8L2P0C7V8 631 aa22.77■■□□□ 1.24
LINC00905-206ENST00000602744 MYO15BQ96JP2 1530 aa22.6■■□□□ 1.21
LINC00905-206ENST00000602744 SCAF1Q9H7N4 1312 aaKnown RBP22.53■■□□□ 1.2
LINC00905-206ENST00000602744 CECR2Q9BXF3 1484 aa22.51■■□□□ 1.19
LINC00905-206ENST00000602744 DNAJC5Q9H3Z4 198 aa22.5■■□□□ 1.19
LINC00905-206ENST00000602744 MAPK8IP2Q13387 824 aaPredicted RBP22.48■■□□□ 1.19
LINC00905-206ENST00000602744 CC2D2AQ9P2K1 1620 aa22.44■■□□□ 1.18
LINC00905-206ENST00000602744 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
LINC00905-206ENST00000602744 DMRT2Q9Y5R5 561 aa22.38■■□□□ 1.17
LINC00905-206ENST00000602744 PPP4R3CPQ6ZMV5 832 aa22.28■■□□□ 1.16
LINC00905-206ENST00000602744 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
LINC00905-206ENST00000602744 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
LINC00905-206ENST00000602744 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
LINC00905-206ENST00000602744 SCRIBQ14160 1630 aa22.02■■□□□ 1.12
LINC00905-206ENST00000602744 CNKSR2Q8WXI2 1034 aa21.84■■□□□ 1.09
LINC00905-206ENST00000602744 CUX2O14529 1486 aa21.74■■□□□ 1.07
LINC00905-206ENST00000602744 HOXD11P31277 338 aaPredicted RBP21.71■■□□□ 1.07
LINC00905-206ENST00000602744 RNF216Q9NWF9 866 aaPredicted RBP21.6■■□□□ 1.05
LINC00905-206ENST00000602744 ERCC6Q03468 1493 aa21.52■■□□□ 1.03
LINC00905-206ENST00000602744 NCBP3Q53F19 620 aaKnown RBP21.51■■□□□ 1.03
LINC00905-206ENST00000602744 NCAPD3P42695 1498 aa21.37■■□□□ 1.01
LINC00905-206ENST00000602744 DCAF8L1A6NGE4 600 aa21.21■□□□□ 0.99
LINC00905-206ENST00000602744 NPM3O75607 178 aaKnown RBP21.21■□□□□ 0.99
LINC00905-206ENST00000602744 NESP48681 1621 aa21.21■□□□□ 0.99
LINC00905-206ENST00000602744 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
LINC00905-206ENST00000602744 TRIM41Q8WV44 630 aa21.17■□□□□ 0.98
LINC00905-206ENST00000602744 HMGXB3Q12766 1538 aa21.12■□□□□ 0.97
LINC00905-206ENST00000602744 THOC2Q8NI27 1593 aaKnown RBP21.11■□□□□ 0.97
LINC00905-206ENST00000602744 SMARCA2P51531 1590 aa21.06■□□□□ 0.96
LINC00905-206ENST00000602744 KCNA4P22459 653 aa21.03■□□□□ 0.96
LINC00905-206ENST00000602744 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
LINC00905-206ENST00000602744 LAMC3Q9Y6N6 1575 aa20.93■□□□□ 0.94
LINC00905-206ENST00000602744 BAZ1BQ9UIG0 1483 aaKnown RBP20.92■□□□□ 0.94
LINC00905-206ENST00000602744 RNF39Q9H2S5 420 aa20.87■□□□□ 0.93
LINC00905-206ENST00000602744 PDS5BQ9NTI5 1447 aa20.85■□□□□ 0.93
LINC00905-206ENST00000602744 KIF21AQ7Z4S6 1674 aa20.84■□□□□ 0.93
LINC00905-206ENST00000602744 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
LINC00905-206ENST00000602744 BAZ1AQ9NRL2 1556 aaPredicted RBP20.76■□□□□ 0.91
LINC00905-206ENST00000602744 MRC2Q9UBG0 1479 aa20.72■□□□□ 0.91
LINC00905-206ENST00000602744 WDR62O43379 1518 aa20.69■□□□□ 0.9
LINC00905-206ENST00000602744 CADPSQ9ULU8 1353 aa20.67■□□□□ 0.9
LINC00905-206ENST00000602744 CACNB1Q02641 598 aaPredicted RBP20.66■□□□□ 0.9
LINC00905-206ENST00000602744 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
LINC00905-206ENST00000602744 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
LINC00905-206ENST00000602744 C1QBPQ07021 282 aaKnown RBP20.58■□□□□ 0.89
LINC00905-206ENST00000602744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.52■□□□□ 0.88
LINC00905-206ENST00000602744 CEP164Q9UPV0 1460 aa20.49■□□□□ 0.87
LINC00905-206ENST00000602744 FANCD2Q9BXW9 1451 aa20.42■□□□□ 0.86
LINC00905-206ENST00000602744 RIMBP3CA6NJZ7 1639 aa20.41■□□□□ 0.86
LINC00905-206ENST00000602744 RIMBP3BA6NNM3 1639 aa20.41■□□□□ 0.86
LINC00905-206ENST00000602744 RIMBP3Q9UFD9 1639 aa20.41■□□□□ 0.86
LINC00905-206ENST00000602744 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
LINC00905-206ENST00000602744 CFTRP13569 1480 aa20.3■□□□□ 0.84
LINC00905-206ENST00000602744 ARHGEF11O15085 1522 aa20.3■□□□□ 0.84
LINC00905-206ENST00000602744 WIZO95785 1651 aa20.26■□□□□ 0.83
LINC00905-206ENST00000602744 SLC4A2P04920 1241 aa20.22■□□□□ 0.83
LINC00905-206ENST00000602744 U3KPZ7 1027 aaPredicted RBP20.21■□□□□ 0.83
LINC00905-206ENST00000602744 CYB5RLQ6IPT4 315 aa20.18■□□□□ 0.82
LINC00905-206ENST00000602744 ZNF608Q9ULD9 1512 aaPredicted RBP20.17■□□□□ 0.82
LINC00905-206ENST00000602744 TRHP20396 242 aaPredicted RBP20.13■□□□□ 0.81
LINC00905-206ENST00000602744 IFT140Q96RY7 1462 aa20.12■□□□□ 0.81
LINC00905-206ENST00000602744 ARAP1Q96P48 1450 aa20.08■□□□□ 0.81
LINC00905-206ENST00000602744 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
LINC00905-206ENST00000602744 EIF4G3O43432 1585 aaKnown RBP19.98■□□□□ 0.79
LINC00905-206ENST00000602744 RSF1Q96T23 1441 aaPredicted RBP19.97■□□□□ 0.79
LINC00905-206ENST00000602744 TOPBP1Q92547 1522 aa19.97■□□□□ 0.79
LINC00905-206ENST00000602744 CHD1O14646 1710 aa19.9■□□□□ 0.78
LINC00905-206ENST00000602744 PRDM2Q13029 1718 aa19.9■□□□□ 0.78
LINC00905-206ENST00000602744 AQRO60306 1485 aaKnown RBP eCLIP19.89■□□□□ 0.77
LINC00905-206ENST00000602744 SLC4A1APQ9BWU0 796 aaKnown RBP19.88■□□□□ 0.77
LINC00905-206ENST00000602744 ABCC8Q09428 1581 aa19.86■□□□□ 0.77
LINC00905-206ENST00000602744 FBLN2P98095 1184 aa19.84■□□□□ 0.77
LINC00905-206ENST00000602744 TARBP1Q13395 1621 aaKnown RBP19.83■□□□□ 0.76
LINC00905-206ENST00000602744 DNMBPQ6XZF7 1577 aa19.81■□□□□ 0.76
LINC00905-206ENST00000602744 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
LINC00905-206ENST00000602744 SPINK5Q9NQ38 1064 aaPredicted RBP19.78■□□□□ 0.76
LINC00905-206ENST00000602744 CLASP1Q7Z460 1538 aa19.75■□□□□ 0.75
LINC00905-206ENST00000602744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.74■□□□□ 0.75
LINC00905-206ENST00000602744 HNRNPUL2Q1KMD3 747 aaKnown RBP19.74■□□□□ 0.75
LINC00905-206ENST00000602744 POLA1P09884 1462 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms