RNA–Protein interactions for RNA: ENST00000602298.2

C1R-214, Transcript of complement C1r, humanhuman

TSL 2

Gene C1R, Length 2,580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-214ENST00000602298 NISCHQ9Y2I1 1504 aa25.82■■□□□ 1.72
C1R-214ENST00000602298 CCDC180Q9P1Z9 1646 aa22.03■■□□□ 1.12
C1R-214ENST00000602298 ZCCHC6Q5VYS8 1495 aaKnown RBP21.95■■□□□ 1.1
C1R-214ENST00000602298 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
C1R-214ENST00000602298 SUPT5HO00267 1087 aaKnown RBP21.59■■□□□ 1.05
C1R-214ENST00000602298 DCAF1Q9Y4B6 1507 aa21.41■■□□□ 1.02
C1R-214ENST00000602298 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
C1R-214ENST00000602298 HRCP23327 699 aa21.33■■□□□ 1
C1R-214ENST00000602298 MYO15BQ96JP2 1530 aa21.27■■□□□ 1
C1R-214ENST00000602298 PCGF6Q9BYE7 350 aa20.89■□□□□ 0.93
C1R-214ENST00000602298 DCAF8L2P0C7V8 631 aa20.84■□□□□ 0.93
C1R-214ENST00000602298 ABCC9O60706 1549 aa20.81■□□□□ 0.92
C1R-214ENST00000602298 TRIM26Q12899 539 aaPredicted RBP20.65■□□□□ 0.9
C1R-214ENST00000602298 ZEB1P37275 1124 aaPredicted RBP20.55■□□□□ 0.88
C1R-214ENST00000602298 LOC105371045A0A1W2PR82 267 aa20.5■□□□□ 0.87
C1R-214ENST00000602298 PPARGC1BQ86YN6 1023 aaKnown RBP20.48■□□□□ 0.87
C1R-214ENST00000602298 RSF1Q96T23 1441 aaPredicted RBP20.47■□□□□ 0.87
C1R-214ENST00000602298 RB1CC1Q8TDY2 1594 aa20.46■□□□□ 0.87
C1R-214ENST00000602298 SCRIBQ14160 1630 aa20.36■□□□□ 0.85
C1R-214ENST00000602298 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
C1R-214ENST00000602298 NACADO15069 1562 aa20.21■□□□□ 0.83
C1R-214ENST00000602298 PELP1Q8IZL8 1130 aaKnown RBP20.2■□□□□ 0.82
C1R-214ENST00000602298 BAZ1AQ9NRL2 1556 aaPredicted RBP19.99■□□□□ 0.79
C1R-214ENST00000602298 MROH2BQ7Z745 1585 aa19.97■□□□□ 0.79
C1R-214ENST00000602298 EIF4G1Q04637 1599 aaKnown RBP19.93■□□□□ 0.78
C1R-214ENST00000602298 CECR2Q9BXF3 1484 aa19.91■□□□□ 0.78
C1R-214ENST00000602298 WIZO95785 1651 aa19.89■□□□□ 0.77
C1R-214ENST00000602298 FAM9AQ8IZU1 332 aaPredicted RBP19.86■□□□□ 0.77
C1R-214ENST00000602298 WRNQ14191 1432 aaPredicted RBP eCLIP19.79■□□□□ 0.76
C1R-214ENST00000602298 TOP2AP11388 1531 aaKnown RBP19.75■□□□□ 0.75
C1R-214ENST00000602298 SCAF1Q9H7N4 1312 aaKnown RBP19.72■□□□□ 0.75
C1R-214ENST00000602298 EEA1Q15075 1411 aa19.69■□□□□ 0.74
C1R-214ENST00000602298 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
C1R-214ENST00000602298 CCER1Q8TC90 406 aaPredicted RBP19.62■□□□□ 0.73
C1R-214ENST00000602298 TNIKQ9UKE5 1360 aa19.59■□□□□ 0.73
C1R-214ENST00000602298 SMARCA2P51531 1590 aa19.58■□□□□ 0.73
C1R-214ENST00000602298 ACIN1Q9UKV3 1341 aaKnown RBP19.57■□□□□ 0.72
C1R-214ENST00000602298 CEP162Q5TB80 1403 aa19.55■□□□□ 0.72
C1R-214ENST00000602298 CENPBP07199 599 aaPredicted RBP19.53■□□□□ 0.72
C1R-214ENST00000602298 CCDC88BA6NC98 1476 aa19.53■□□□□ 0.72
C1R-214ENST00000602298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.5■□□□□ 0.71
C1R-214ENST00000602298 ABCC8Q09428 1581 aa19.48■□□□□ 0.71
C1R-214ENST00000602298 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
C1R-214ENST00000602298 DIEXFQ68CQ4 756 aaKnown RBP19.44■□□□□ 0.7
C1R-214ENST00000602298 GOLGA3Q08378 1498 aa19.43■□□□□ 0.7
C1R-214ENST00000602298 MYT1Q01538 1121 aa19.41■□□□□ 0.7
C1R-214ENST00000602298 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.7
C1R-214ENST00000602298 CSRNP3Q8WYN3 585 aa19.36■□□□□ 0.69
C1R-214ENST00000602298 NEUROD1Q13562 356 aa19.36■□□□□ 0.69
C1R-214ENST00000602298 PEG3Q9GZU2 1588 aa19.35■□□□□ 0.69
C1R-214ENST00000602298 SOGA1O94964 1423 aa19.35■□□□□ 0.69
C1R-214ENST00000602298 KIF21BO75037 1637 aa19.35■□□□□ 0.69
C1R-214ENST00000602298 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
C1R-214ENST00000602298 ZNF316A6NFI3 1004 aaPredicted RBP19.29■□□□□ 0.68
C1R-214ENST00000602298 BAZ1BQ9UIG0 1483 aaKnown RBP19.26■□□□□ 0.67
C1R-214ENST00000602298 GTF3C3Q9Y5Q9 886 aa19.23■□□□□ 0.67
C1R-214ENST00000602298 UBTFP17480 764 aaKnown RBP19.21■□□□□ 0.67
C1R-214ENST00000602298 RUSC2Q8N2Y8 1516 aa19.18■□□□□ 0.66
C1R-214ENST00000602298 VPS8Q8N3P4 1428 aa19.16■□□□□ 0.66
C1R-214ENST00000602298 CLIP1P30622 1438 aa19.13■□□□□ 0.65
C1R-214ENST00000602298 SYNJ1O43426 1573 aa19.12■□□□□ 0.65
C1R-214ENST00000602298 BICRAQ9NZM4 1560 aa19.09■□□□□ 0.65
C1R-214ENST00000602298 CLSPNQ9HAW4 1339 aa19.08■□□□□ 0.64
C1R-214ENST00000602298 TTBK1Q5TCY1 1321 aaPredicted RBP19.02■□□□□ 0.64
C1R-214ENST00000602298 APLP2Q06481 763 aa19■□□□□ 0.63
C1R-214ENST00000602298 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
C1R-214ENST00000602298 TOP2BQ02880 1626 aa18.99■□□□□ 0.63
C1R-214ENST00000602298 ATAD2BQ9ULI0 1458 aa18.97■□□□□ 0.63
C1R-214ENST00000602298 BIVM-ERCC5R4GMW8 1640 aa18.97■□□□□ 0.63
C1R-214ENST00000602298 RAPGEF2Q9Y4G8 1499 aa18.93■□□□□ 0.62
C1R-214ENST00000602298 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
C1R-214ENST00000602298 MIER1Q8N108 512 aa18.88■□□□□ 0.61
C1R-214ENST00000602298 PRXQ9BXM0 1461 aa18.84■□□□□ 0.61
C1R-214ENST00000602298 CUX2O14529 1486 aa18.82■□□□□ 0.6
C1R-214ENST00000602298 YTHDC1Q96MU7 727 aaKnown RBP18.8■□□□□ 0.6
C1R-214ENST00000602298 RRBP1Q9P2E9 1410 aaKnown RBP18.79■□□□□ 0.6
C1R-214ENST00000602298 DHX57Q6P158 1386 aaKnown RBP18.79■□□□□ 0.6
C1R-214ENST00000602298 ARAP1Q96P48 1450 aa18.78■□□□□ 0.6
C1R-214ENST00000602298 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
C1R-214ENST00000602298 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
C1R-214ENST00000602298 KIF27Q86VH2 1401 aa18.68■□□□□ 0.58
C1R-214ENST00000602298 MAP3K1Q13233 1512 aa18.67■□□□□ 0.58
C1R-214ENST00000602298 NCAPD3P42695 1498 aa18.61■□□□□ 0.57
C1R-214ENST00000602298 CCNB3Q8WWL7 1395 aa18.61■□□□□ 0.57
C1R-214ENST00000602298 CUX1P39880 1505 aa18.61■□□□□ 0.57
C1R-214ENST00000602298 PRDM2Q13029 1718 aa18.61■□□□□ 0.57
C1R-214ENST00000602298 ARHGAP35Q9NRY4 1499 aa18.55■□□□□ 0.56
C1R-214ENST00000602298 CFTRP13569 1480 aa18.53■□□□□ 0.56
C1R-214ENST00000602298 KANK4Q5T7N3 995 aaPredicted RBP18.52■□□□□ 0.56
C1R-214ENST00000602298 TIAM1Q13009 1591 aa18.51■□□□□ 0.55
C1R-214ENST00000602298 SUPT16HQ9Y5B9 1047 aaKnown RBP18.51■□□□□ 0.55
C1R-214ENST00000602298 RANGAP1P46060 587 aaPredicted RBP18.45■□□□□ 0.54
C1R-214ENST00000602298 TIMELESSQ9UNS1 1208 aa18.45■□□□□ 0.54
C1R-214ENST00000602298 MAPKBP1O60336 1514 aa18.45■□□□□ 0.54
C1R-214ENST00000602298 CFAP43Q8NDM7 1665 aa18.44■□□□□ 0.54
C1R-214ENST00000602298 RAB3GAP2Q9H2M9 1393 aa18.42■□□□□ 0.54
C1R-214ENST00000602298 SETD5Q9C0A6 1442 aa18.42■□□□□ 0.54
C1R-214ENST00000602298 FHAD1B1AJZ9 1412 aa18.41■□□□□ 0.54
C1R-214ENST00000602298 LRRC9Q6ZRR7 1453 aa18.39■□□□□ 0.53
C1R-214ENST00000602298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms