RNA–Protein interactions for RNA: ENST00000601288.1

C19orf44-208, Transcript of chromosome 19 open reading frame 44, humanhuman

APPRIS ALT2 TSL 3

Gene C19orf44, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf44-208ENST00000601288 AEBP2Q6ZN18 517 aaPredicted RBP26.3■■□□□ 1.8
C19orf44-208ENST00000601288 CHIC1Q5VXU3 224 aa26.06■■□□□ 1.76
C19orf44-208ENST00000601288 NISCHQ9Y2I1 1504 aa22.92■■□□□ 1.26
C19orf44-208ENST00000601288 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
C19orf44-208ENST00000601288 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
C19orf44-208ENST00000601288 PLPPR3Q6T4P5 718 aa21.32■■□□□ 1
C19orf44-208ENST00000601288 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.9
C19orf44-208ENST00000601288 FOXD1Q16676 465 aa20.64■□□□□ 0.89
C19orf44-208ENST00000601288 ABCC9O60706 1549 aa20.1■□□□□ 0.81
C19orf44-208ENST00000601288 PPP6R1Q9UPN7 881 aa20.09■□□□□ 0.81
C19orf44-208ENST00000601288 ADRA2BP18089 450 aa20.07■□□□□ 0.8
C19orf44-208ENST00000601288 PIAS4Q8N2W9 510 aaPredicted RBP19.52■□□□□ 0.72
C19orf44-208ENST00000601288 RB1CC1Q8TDY2 1594 aa19.46■□□□□ 0.71
C19orf44-208ENST00000601288 NACADO15069 1562 aa19.4■□□□□ 0.7
C19orf44-208ENST00000601288 MYO15BQ96JP2 1530 aa19.27■□□□□ 0.68
C19orf44-208ENST00000601288 DCAF1Q9Y4B6 1507 aa19.07■□□□□ 0.64
C19orf44-208ENST00000601288 DCAF8L2P0C7V8 631 aa19.06■□□□□ 0.64
C19orf44-208ENST00000601288 ZCCHC6Q5VYS8 1495 aaKnown RBP19.05■□□□□ 0.64
C19orf44-208ENST00000601288 UNC13AQ9UPW8 1703 aa19.01■□□□□ 0.63
C19orf44-208ENST00000601288 MSH5O43196 834 aa18.96■□□□□ 0.63
C19orf44-208ENST00000601288 PPP4R3CPQ6ZMV5 832 aa18.79■□□□□ 0.6
C19orf44-208ENST00000601288 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.6
C19orf44-208ENST00000601288 BICRAQ9NZM4 1560 aa18.73■□□□□ 0.59
C19orf44-208ENST00000601288 KCNA4P22459 653 aa18.69■□□□□ 0.58
C19orf44-208ENST00000601288 PABPN1Q86U42 306 aaKnown RBP eCLIP18.65■□□□□ 0.58
C19orf44-208ENST00000601288 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
C19orf44-208ENST00000601288 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
C19orf44-208ENST00000601288 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
C19orf44-208ENST00000601288 NCBP3Q53F19 620 aaKnown RBP18.43■□□□□ 0.54
C19orf44-208ENST00000601288 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
C19orf44-208ENST00000601288 CC2D2AQ9P2K1 1620 aa18.28■□□□□ 0.52
C19orf44-208ENST00000601288 CNKSR2Q8WXI2 1034 aa18.23■□□□□ 0.51
C19orf44-208ENST00000601288 CECR2Q9BXF3 1484 aa18.16■□□□□ 0.5
C19orf44-208ENST00000601288 NPM3O75607 178 aaKnown RBP18.12■□□□□ 0.49
C19orf44-208ENST00000601288 MAPK8IP2Q13387 824 aaPredicted RBP18.1■□□□□ 0.49
C19orf44-208ENST00000601288 DMRT2Q9Y5R5 561 aa17.88■□□□□ 0.45
C19orf44-208ENST00000601288 SLC4A1APQ9BWU0 796 aaKnown RBP17.87■□□□□ 0.45
C19orf44-208ENST00000601288 SMARCA2P51531 1590 aa17.85■□□□□ 0.45
C19orf44-208ENST00000601288 SMARCA4P51532 1647 aa17.85■□□□□ 0.45
C19orf44-208ENST00000601288 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
C19orf44-208ENST00000601288 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
C19orf44-208ENST00000601288 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
C19orf44-208ENST00000601288 HMGXB3Q12766 1538 aa17.78■□□□□ 0.44
C19orf44-208ENST00000601288 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
C19orf44-208ENST00000601288 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
C19orf44-208ENST00000601288 HOXD11P31277 338 aaPredicted RBP17.66■□□□□ 0.42
C19orf44-208ENST00000601288 EHMT2Q96KQ7 1210 aa17.65■□□□□ 0.42
C19orf44-208ENST00000601288 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
C19orf44-208ENST00000601288 MROH2BQ7Z745 1585 aa17.57■□□□□ 0.4
C19orf44-208ENST00000601288 POTEDQ86YR6 584 aa17.53■□□□□ 0.4
C19orf44-208ENST00000601288 LAMC3Q9Y6N6 1575 aa17.47■□□□□ 0.39
C19orf44-208ENST00000601288 ERCC6Q03468 1493 aa17.45■□□□□ 0.38
C19orf44-208ENST00000601288 CUX2O14529 1486 aa17.42■□□□□ 0.38
C19orf44-208ENST00000601288 WIZO95785 1651 aa17.42■□□□□ 0.38
C19orf44-208ENST00000601288 CSRNP3Q8WYN3 585 aa17.39■□□□□ 0.37
C19orf44-208ENST00000601288 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
C19orf44-208ENST00000601288 RSF1Q96T23 1441 aaPredicted RBP17.3■□□□□ 0.36
C19orf44-208ENST00000601288 NESP48681 1621 aa17.3■□□□□ 0.36
C19orf44-208ENST00000601288 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
C19orf44-208ENST00000601288 CADPSQ9ULU8 1353 aa17.27■□□□□ 0.35
C19orf44-208ENST00000601288 KIF21AQ7Z4S6 1674 aa17.25■□□□□ 0.35
C19orf44-208ENST00000601288 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
C19orf44-208ENST00000601288 ZBTB22O15209 634 aa17.21■□□□□ 0.35
C19orf44-208ENST00000601288 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
C19orf44-208ENST00000601288 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
C19orf44-208ENST00000601288 CFTRP13569 1480 aa17.13■□□□□ 0.33
C19orf44-208ENST00000601288 MRC2Q9UBG0 1479 aa17.11■□□□□ 0.33
C19orf44-208ENST00000601288 CEP164Q9UPV0 1460 aa17.11■□□□□ 0.33
C19orf44-208ENST00000601288 WDR62O43379 1518 aa17.07■□□□□ 0.32
C19orf44-208ENST00000601288 FANCD2Q9BXW9 1451 aa17.06■□□□□ 0.32
C19orf44-208ENST00000601288 SLC4A2P04920 1241 aa17.03■□□□□ 0.32
C19orf44-208ENST00000601288 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
C19orf44-208ENST00000601288 DNAJC5Q9H3Z4 198 aa16.98■□□□□ 0.31
C19orf44-208ENST00000601288 DCAF8L1A6NGE4 600 aa16.96■□□□□ 0.31
C19orf44-208ENST00000601288 ABCC8Q09428 1581 aa16.92■□□□□ 0.3
C19orf44-208ENST00000601288 URB2Q14146 1524 aaKnown RBP16.85■□□□□ 0.29
C19orf44-208ENST00000601288 DNMBPQ6XZF7 1577 aa16.79■□□□□ 0.28
C19orf44-208ENST00000601288 TOPBP1Q92547 1522 aa16.77■□□□□ 0.28
C19orf44-208ENST00000601288 MYCNP04198 464 aaPredicted RBP16.77■□□□□ 0.28
C19orf44-208ENST00000601288 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
C19orf44-208ENST00000601288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
C19orf44-208ENST00000601288 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
C19orf44-208ENST00000601288 SUPT5HO00267 1087 aaKnown RBP16.62■□□□□ 0.25
C19orf44-208ENST00000601288 TARBP1Q13395 1621 aaKnown RBP16.62■□□□□ 0.25
C19orf44-208ENST00000601288 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
C19orf44-208ENST00000601288 ATXN8OSP0DMR3 200 aa16.6■□□□□ 0.25
C19orf44-208ENST00000601288 POLA1P09884 1462 aaPredicted RBP16.59■□□□□ 0.25
C19orf44-208ENST00000601288 OSCARQ8IYS5 282 aa16.57■□□□□ 0.24
C19orf44-208ENST00000601288 ZNF608Q9ULD9 1512 aaPredicted RBP16.55■□□□□ 0.24
C19orf44-208ENST00000601288 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
C19orf44-208ENST00000601288 SOGA1O94964 1423 aa16.53■□□□□ 0.24
C19orf44-208ENST00000601288 CUX1P39880 1505 aa16.52■□□□□ 0.24
C19orf44-208ENST00000601288 FGD5Q6ZNL6 1462 aa16.52■□□□□ 0.23
C19orf44-208ENST00000601288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
C19orf44-208ENST00000601288 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
C19orf44-208ENST00000601288 CHD1O14646 1710 aa16.48■□□□□ 0.23
C19orf44-208ENST00000601288 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
C19orf44-208ENST00000601288 AQRO60306 1485 aaKnown RBP eCLIP16.44■□□□□ 0.22
C19orf44-208ENST00000601288 SAMD1Q6SPF0 538 aaPredicted RBP16.44■□□□□ 0.22
C19orf44-208ENST00000601288 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms