RNA–Protein interactions for RNA: ENST00000599491.5

LINC00854-211, Long intergenic non-protein coding RNA 854, humanhuman

TSL 5

Gene LINC00854, Length 655 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854-211ENST00000599491 AEBP2Q6ZN18 517 aaPredicted RBP15.39■□□□□ 0.05
LINC00854-211ENST00000599491 CHIC1Q5VXU3 224 aa14.14□□□□□ -0.15
LINC00854-211ENST00000599491 POTEDQ86YR6 584 aa13.28□□□□□ -0.28
LINC00854-211ENST00000599491 SENP3Q9H4L4 574 aaPredicted RBP13.09□□□□□ -0.31
LINC00854-211ENST00000599491 PHF23Q9BUL5 403 aaPredicted RBP12.85□□□□□ -0.35
LINC00854-211ENST00000599491 FOXD1Q16676 465 aa12.43□□□□□ -0.42
LINC00854-211ENST00000599491 MSH5O43196 834 aa11.85□□□□□ -0.51
LINC00854-211ENST00000599491 PIAS4Q8N2W9 510 aaPredicted RBP11.3□□□□□ -0.6
LINC00854-211ENST00000599491 NISCHQ9Y2I1 1504 aa11.06□□□□□ -0.64
LINC00854-211ENST00000599491 PPP6R1Q9UPN7 881 aa10.97□□□□□ -0.65
LINC00854-211ENST00000599491 ADRA2BP18089 450 aa10.82□□□□□ -0.68
LINC00854-211ENST00000599491 CACNB1Q02641 598 aaPredicted RBP10.75□□□□□ -0.69
LINC00854-211ENST00000599491 PLPPR3Q6T4P5 718 aa10.36□□□□□ -0.75
LINC00854-211ENST00000599491 DMRT2Q9Y5R5 561 aa10.29□□□□□ -0.76
LINC00854-211ENST00000599491 MAPK8IP2Q13387 824 aaPredicted RBP10.26□□□□□ -0.77
LINC00854-211ENST00000599491 POTEHQ6S545 545 aa10.18□□□□□ -0.78
LINC00854-211ENST00000599491 RNF39Q9H2S5 420 aa10.12□□□□□ -0.79
LINC00854-211ENST00000599491 C1QBPQ07021 282 aaKnown RBP9.83□□□□□ -0.84
LINC00854-211ENST00000599491 DCAF8L1A6NGE4 600 aa9.82□□□□□ -0.84
LINC00854-211ENST00000599491 CCDC180Q9P1Z9 1646 aa9.82□□□□□ -0.84
LINC00854-211ENST00000599491 SCAF1Q9H7N4 1312 aaKnown RBP9.69□□□□□ -0.86
LINC00854-211ENST00000599491 HOXD11P31277 338 aaPredicted RBP9.56□□□□□ -0.88
LINC00854-211ENST00000599491 ABCC9O60706 1549 aa9.43□□□□□ -0.9
LINC00854-211ENST00000599491 DNAJC5BQ9UF47 199 aa9.34□□□□□ -0.91
LINC00854-211ENST00000599491 ZCCHC6Q5VYS8 1495 aaKnown RBP9.24□□□□□ -0.93
LINC00854-211ENST00000599491 MYO15BQ96JP2 1530 aa9.21□□□□□ -0.93
LINC00854-211ENST00000599491 NACADO15069 1562 aa9.2□□□□□ -0.94
LINC00854-211ENST00000599491 DCAF1Q9Y4B6 1507 aa9.2□□□□□ -0.94
LINC00854-211ENST00000599491 RNF216Q9NWF9 866 aaPredicted RBP9.19□□□□□ -0.94
LINC00854-211ENST00000599491 RB1CC1Q8TDY2 1594 aa9.17□□□□□ -0.94
LINC00854-211ENST00000599491 DSG3P32926 999 aa9.17□□□□□ -0.94
LINC00854-211ENST00000599491 DCAF8L2P0C7V8 631 aa9.14□□□□□ -0.95
LINC00854-211ENST00000599491 SP7Q8TDD2 431 aaPredicted RBP9.09□□□□□ -0.95
LINC00854-211ENST00000599491 CNKSR2Q8WXI2 1034 aa9.02□□□□□ -0.97
LINC00854-211ENST00000599491 PPP4R3CPQ6ZMV5 832 aa9.01□□□□□ -0.97
LINC00854-211ENST00000599491 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9□□□□□ -0.97
LINC00854-211ENST00000599491 SPINK5Q9NQ38 1064 aaPredicted RBP9□□□□□ -0.97
LINC00854-211ENST00000599491 UNC13AQ9UPW8 1703 aa8.94□□□□□ -0.98
LINC00854-211ENST00000599491 CAPN15O75808 1086 aa8.91□□□□□ -0.98
LINC00854-211ENST00000599491 CHRDL2Q6WN34 429 aa8.91□□□□□ -0.98
LINC00854-211ENST00000599491 SCRIBQ14160 1630 aa8.91□□□□□ -0.98
LINC00854-211ENST00000599491 BICRAQ9NZM4 1560 aa8.86□□□□□ -0.99
LINC00854-211ENST00000599491 SHROOM4Q9ULL8 1493 aa8.85□□□□□ -0.99
LINC00854-211ENST00000599491 U3KPZ7 1027 aaPredicted RBP8.84□□□□□ -0.99
LINC00854-211ENST00000599491 PABPN1Q86U42 306 aaKnown RBP eCLIP8.81□□□□□ -1
LINC00854-211ENST00000599491 PELP1Q8IZL8 1130 aaKnown RBP8.78□□□□□ -1
LINC00854-211ENST00000599491 PLSCR2Q9NRY7 297 aa8.72□□□□□ -1.01
LINC00854-211ENST00000599491 ABCB7O75027 752 aa8.7□□□□□ -1.02
LINC00854-211ENST00000599491 MYT1Q01538 1121 aa8.67□□□□□ -1.02
LINC00854-211ENST00000599491 RBM42Q9BTD8 480 aaKnown RBP8.63□□□□□ -1.03
LINC00854-211ENST00000599491 EIF4G1Q04637 1599 aaKnown RBP8.63□□□□□ -1.03
LINC00854-211ENST00000599491 BAZ1AQ9NRL2 1556 aaPredicted RBP8.58□□□□□ -1.04
LINC00854-211ENST00000599491 TRHP20396 242 aaPredicted RBP8.57□□□□□ -1.04
LINC00854-211ENST00000599491 CC2D2AQ9P2K1 1620 aa8.56□□□□□ -1.04
LINC00854-211ENST00000599491 CECR2Q9BXF3 1484 aa8.56□□□□□ -1.04
LINC00854-211ENST00000599491 SMARCA4P51532 1647 aa8.55□□□□□ -1.04
LINC00854-211ENST00000599491 EVX2Q03828 476 aa8.55□□□□□ -1.04
LINC00854-211ENST00000599491 HAX1O00165 279 aa8.54□□□□□ -1.04
LINC00854-211ENST00000599491 PIP4P2Q8N4L2 257 aa8.54□□□□□ -1.04
LINC00854-211ENST00000599491 SMARCA2P51531 1590 aa8.5□□□□□ -1.05
LINC00854-211ENST00000599491 LHX8Q68G74 356 aa8.5□□□□□ -1.05
LINC00854-211ENST00000599491 PEG3Q9GZU2 1588 aa8.5□□□□□ -1.05
LINC00854-211ENST00000599491 MROH2BQ7Z745 1585 aa8.49□□□□□ -1.05
LINC00854-211ENST00000599491 NCAPD3P42695 1498 aa8.48□□□□□ -1.05
LINC00854-211ENST00000599491 ATAD2BQ9ULI0 1458 aa8.48□□□□□ -1.05
LINC00854-211ENST00000599491 ZNF219Q9P2Y4 722 aaPredicted RBP8.46□□□□□ -1.06
LINC00854-211ENST00000599491 RSF1Q96T23 1441 aaPredicted RBP8.46□□□□□ -1.06
LINC00854-211ENST00000599491 HMGXB3Q12766 1538 aa8.45□□□□□ -1.06
LINC00854-211ENST00000599491 BAZ1BQ9UIG0 1483 aaKnown RBP8.42□□□□□ -1.06
LINC00854-211ENST00000599491 WIZO95785 1651 aa8.4□□□□□ -1.06
LINC00854-211ENST00000599491 TOP2AP11388 1531 aaKnown RBP8.36□□□□□ -1.07
LINC00854-211ENST00000599491 TTBK1Q5TCY1 1321 aaPredicted RBP8.34□□□□□ -1.07
LINC00854-211ENST00000599491 FXR2P51116 673 aaKnown RBP eCLIP8.32□□□□□ -1.08
LINC00854-211ENST00000599491 NPM3O75607 178 aaKnown RBP8.3□□□□□ -1.08
LINC00854-211ENST00000599491 AKT1S1Q96B36 256 aa8.29□□□□□ -1.08
LINC00854-211ENST00000599491 SUPT5HO00267 1087 aaKnown RBP8.28□□□□□ -1.08
LINC00854-211ENST00000599491 REM2Q8IYK8 340 aaPredicted RBP8.27□□□□□ -1.09
LINC00854-211ENST00000599491 NCBP3Q53F19 620 aaKnown RBP8.25□□□□□ -1.09
LINC00854-211ENST00000599491 LAMC3Q9Y6N6 1575 aa8.24□□□□□ -1.09
LINC00854-211ENST00000599491 APLP2Q06481 763 aa8.24□□□□□ -1.09
LINC00854-211ENST00000599491 CCDC88BA6NC98 1476 aa8.24□□□□□ -1.09
LINC00854-211ENST00000599491 SLC4A2P04920 1241 aa8.23□□□□□ -1.09
LINC00854-211ENST00000599491 HRCP23327 699 aa8.23□□□□□ -1.09
LINC00854-211ENST00000599491 CADPSQ9ULU8 1353 aa8.22□□□□□ -1.09
LINC00854-211ENST00000599491 PITPNM1O00562 1244 aa8.22□□□□□ -1.09
LINC00854-211ENST00000599491 CFTRP13569 1480 aa8.2□□□□□ -1.1
LINC00854-211ENST00000599491 GABBR2O75899 941 aa8.2□□□□□ -1.1
LINC00854-211ENST00000599491 PDS5BQ9NTI5 1447 aa8.19□□□□□ -1.1
LINC00854-211ENST00000599491 NESP48681 1621 aa8.18□□□□□ -1.1
LINC00854-211ENST00000599491 PRDM2Q13029 1718 aa8.17□□□□□ -1.1
LINC00854-211ENST00000599491 POLA2Q14181 598 aa8.15□□□□□ -1.1
LINC00854-211ENST00000599491 ERCC6Q03468 1493 aa8.14□□□□□ -1.11
LINC00854-211ENST00000599491 FANCD2Q9BXW9 1451 aa8.13□□□□□ -1.11
LINC00854-211ENST00000599491 KIF21AQ7Z4S6 1674 aa8.12□□□□□ -1.11
LINC00854-211ENST00000599491 POTEIP0CG38 1075 aa8.12□□□□□ -1.11
LINC00854-211ENST00000599491 CEP164Q9UPV0 1460 aa8.11□□□□□ -1.11
LINC00854-211ENST00000599491 C19orf67A6NJJ6 358 aa8.1□□□□□ -1.11
LINC00854-211ENST00000599491 MRC2Q9UBG0 1479 aa8.07□□□□□ -1.12
LINC00854-211ENST00000599491 THOC2Q8NI27 1593 aaKnown RBP8.07□□□□□ -1.12
LINC00854-211ENST00000599491 POTEMA6NI47 508 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms