RNA–Protein interactions for RNA: ENST00000599273.1

LINC00658-205, long intergenic non-protein coding RNA 658, humanhuman

TSL 5

Gene LINC00658, Length 515 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00658-205ENST00000599273 AEBP2Q6ZN18 517 aaPredicted RBP27.8■■■□□ 2.04
LINC00658-205ENST00000599273 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
LINC00658-205ENST00000599273 SENP3Q9H4L4 574 aaPredicted RBP23.73■■□□□ 1.39
LINC00658-205ENST00000599273 PHF23Q9BUL5 403 aaPredicted RBP23.46■■□□□ 1.35
LINC00658-205ENST00000599273 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
LINC00658-205ENST00000599273 FOXD1Q16676 465 aa22.03■■□□□ 1.12
LINC00658-205ENST00000599273 PLPPR3Q6T4P5 718 aa21.56■■□□□ 1.04
LINC00658-205ENST00000599273 PPP6R1Q9UPN7 881 aa20.82■□□□□ 0.92
LINC00658-205ENST00000599273 ADRA2BP18089 450 aa20.77■□□□□ 0.92
LINC00658-205ENST00000599273 PIAS4Q8N2W9 510 aaPredicted RBP20.68■□□□□ 0.9
LINC00658-205ENST00000599273 MSH5O43196 834 aa20.54■□□□□ 0.88
LINC00658-205ENST00000599273 ABCC9O60706 1549 aa19.97■□□□□ 0.79
LINC00658-205ENST00000599273 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
LINC00658-205ENST00000599273 POTEDQ86YR6 584 aa19.42■□□□□ 0.7
LINC00658-205ENST00000599273 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
LINC00658-205ENST00000599273 RB1CC1Q8TDY2 1594 aa19.02■□□□□ 0.64
LINC00658-205ENST00000599273 MAPK8IP2Q13387 824 aaPredicted RBP18.96■□□□□ 0.63
LINC00658-205ENST00000599273 NACADO15069 1562 aa18.93■□□□□ 0.62
LINC00658-205ENST00000599273 PPP4R3CPQ6ZMV5 832 aa18.91■□□□□ 0.62
LINC00658-205ENST00000599273 DNAJC5BQ9UF47 199 aa18.87■□□□□ 0.61
LINC00658-205ENST00000599273 DCAF8L2P0C7V8 631 aa18.86■□□□□ 0.61
LINC00658-205ENST00000599273 DMRT2Q9Y5R5 561 aa18.85■□□□□ 0.61
LINC00658-205ENST00000599273 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
LINC00658-205ENST00000599273 PABPN1Q86U42 306 aaKnown RBP eCLIP18.66■□□□□ 0.58
LINC00658-205ENST00000599273 CNKSR2Q8WXI2 1034 aa18.51■□□□□ 0.55
LINC00658-205ENST00000599273 UNC13AQ9UPW8 1703 aa18.49■□□□□ 0.55
LINC00658-205ENST00000599273 BICRAQ9NZM4 1560 aa18.48■□□□□ 0.55
LINC00658-205ENST00000599273 DCAF1Q9Y4B6 1507 aa18.47■□□□□ 0.55
LINC00658-205ENST00000599273 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.54
LINC00658-205ENST00000599273 NCBP3Q53F19 620 aaKnown RBP18.33■□□□□ 0.52
LINC00658-205ENST00000599273 HOXD11P31277 338 aaPredicted RBP18.31■□□□□ 0.52
LINC00658-205ENST00000599273 SHROOM4Q9ULL8 1493 aa18.27■□□□□ 0.52
LINC00658-205ENST00000599273 RNF216Q9NWF9 866 aaPredicted RBP18.27■□□□□ 0.52
LINC00658-205ENST00000599273 SCRIBQ14160 1630 aa18.12■□□□□ 0.49
LINC00658-205ENST00000599273 CC2D2AQ9P2K1 1620 aa18.03■□□□□ 0.48
LINC00658-205ENST00000599273 CECR2Q9BXF3 1484 aa18.02■□□□□ 0.48
LINC00658-205ENST00000599273 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.48
LINC00658-205ENST00000599273 EIF4G1Q04637 1599 aaKnown RBP18.01■□□□□ 0.47
LINC00658-205ENST00000599273 DCAF8L1A6NGE4 600 aa18.01■□□□□ 0.47
LINC00658-205ENST00000599273 KCNA4P22459 653 aa17.95■□□□□ 0.46
LINC00658-205ENST00000599273 NCAPD3P42695 1498 aa17.54■□□□□ 0.4
LINC00658-205ENST00000599273 RNF39Q9H2S5 420 aa17.53■□□□□ 0.4
LINC00658-205ENST00000599273 ATAD2BQ9ULI0 1458 aa17.44■□□□□ 0.38
LINC00658-205ENST00000599273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.41■□□□□ 0.38
LINC00658-205ENST00000599273 CACNB1Q02641 598 aaPredicted RBP17.38■□□□□ 0.37
LINC00658-205ENST00000599273 DNAJC5Q9H3Z4 198 aa17.37■□□□□ 0.37
LINC00658-205ENST00000599273 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
LINC00658-205ENST00000599273 SMARCA4P51532 1647 aa17.34■□□□□ 0.37
LINC00658-205ENST00000599273 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
LINC00658-205ENST00000599273 C1QBPQ07021 282 aaKnown RBP17.32■□□□□ 0.36
LINC00658-205ENST00000599273 BAZ1AQ9NRL2 1556 aaPredicted RBP17.29■□□□□ 0.36
LINC00658-205ENST00000599273 CUX2O14529 1486 aa17.27■□□□□ 0.36
LINC00658-205ENST00000599273 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
LINC00658-205ENST00000599273 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
LINC00658-205ENST00000599273 BAZ1BQ9UIG0 1483 aaKnown RBP17.22■□□□□ 0.35
LINC00658-205ENST00000599273 MROH2BQ7Z745 1585 aa17.17■□□□□ 0.34
LINC00658-205ENST00000599273 NESP48681 1621 aa17.16■□□□□ 0.34
LINC00658-205ENST00000599273 SLC4A2P04920 1241 aa17.11■□□□□ 0.33
LINC00658-205ENST00000599273 U3KPZ7 1027 aaPredicted RBP17.09■□□□□ 0.33
LINC00658-205ENST00000599273 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
LINC00658-205ENST00000599273 SLC4A1APQ9BWU0 796 aaKnown RBP17.03■□□□□ 0.32
LINC00658-205ENST00000599273 PDS5BQ9NTI5 1447 aa17.02■□□□□ 0.31
LINC00658-205ENST00000599273 CADPSQ9ULU8 1353 aa17.01■□□□□ 0.31
LINC00658-205ENST00000599273 THOC2Q8NI27 1593 aaKnown RBP16.94■□□□□ 0.3
LINC00658-205ENST00000599273 WIZO95785 1651 aa16.91■□□□□ 0.3
LINC00658-205ENST00000599273 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
LINC00658-205ENST00000599273 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
LINC00658-205ENST00000599273 MRC2Q9UBG0 1479 aa16.81■□□□□ 0.28
LINC00658-205ENST00000599273 CFTRP13569 1480 aa16.79■□□□□ 0.28
LINC00658-205ENST00000599273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.78■□□□□ 0.28
LINC00658-205ENST00000599273 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
LINC00658-205ENST00000599273 WDR62O43379 1518 aa16.76■□□□□ 0.27
LINC00658-205ENST00000599273 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
LINC00658-205ENST00000599273 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
LINC00658-205ENST00000599273 TOP2AP11388 1531 aaKnown RBP16.72■□□□□ 0.27
LINC00658-205ENST00000599273 APLP2Q06481 763 aa16.72■□□□□ 0.27
LINC00658-205ENST00000599273 SPINK5Q9NQ38 1064 aaPredicted RBP16.71■□□□□ 0.27
LINC00658-205ENST00000599273 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
LINC00658-205ENST00000599273 FOXD4L1Q9NU39 408 aa16.69■□□□□ 0.26
LINC00658-205ENST00000599273 CAPN15O75808 1086 aa16.68■□□□□ 0.26
LINC00658-205ENST00000599273 SAMD1Q6SPF0 538 aaPredicted RBP16.68■□□□□ 0.26
LINC00658-205ENST00000599273 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
LINC00658-205ENST00000599273 URB2Q14146 1524 aaKnown RBP16.59■□□□□ 0.25
LINC00658-205ENST00000599273 OSCARQ8IYS5 282 aa16.57■□□□□ 0.24
LINC00658-205ENST00000599273 ZNF219Q9P2Y4 722 aaPredicted RBP16.53■□□□□ 0.24
LINC00658-205ENST00000599273 DSG3P32926 999 aa16.52■□□□□ 0.24
LINC00658-205ENST00000599273 ZBTB22O15209 634 aa16.5■□□□□ 0.23
LINC00658-205ENST00000599273 TRHP20396 242 aaPredicted RBP16.48■□□□□ 0.23
LINC00658-205ENST00000599273 TRIM41Q8WV44 630 aa16.47■□□□□ 0.23
LINC00658-205ENST00000599273 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
LINC00658-205ENST00000599273 IFT140Q96RY7 1462 aa16.44■□□□□ 0.22
LINC00658-205ENST00000599273 PRDM2Q13029 1718 aa16.43■□□□□ 0.22
LINC00658-205ENST00000599273 TOPBP1Q92547 1522 aa16.41■□□□□ 0.22
LINC00658-205ENST00000599273 ZNF608Q9ULD9 1512 aaPredicted RBP16.39■□□□□ 0.21
LINC00658-205ENST00000599273 DNMBPQ6XZF7 1577 aa16.33■□□□□ 0.2
LINC00658-205ENST00000599273 ABCB7O75027 752 aa16.3■□□□□ 0.2
LINC00658-205ENST00000599273 AQRO60306 1485 aaKnown RBP eCLIP16.27■□□□□ 0.19
LINC00658-205ENST00000599273 TARBP1Q13395 1621 aaKnown RBP16.25■□□□□ 0.19
LINC00658-205ENST00000599273 POLA1P09884 1462 aaPredicted RBP16.24■□□□□ 0.19
LINC00658-205ENST00000599273 SOGA1O94964 1423 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms