RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 AEBP2Q6ZN18 517 aaPredicted RBP31.27■■■□□ 2.6
TUBD1-215ENST00000593110 CHIC1Q5VXU3 224 aa30.52■■■□□ 2.48
TUBD1-215ENST00000593110 PHF23Q9BUL5 403 aaPredicted RBP26.78■■□□□ 1.88
TUBD1-215ENST00000593110 SENP3Q9H4L4 574 aaPredicted RBP26.64■■□□□ 1.86
TUBD1-215ENST00000593110 PLPPR3Q6T4P5 718 aa24.79■■□□□ 1.56
TUBD1-215ENST00000593110 NISCHQ9Y2I1 1504 aa24.75■■□□□ 1.55
TUBD1-215ENST00000593110 FOXD1Q16676 465 aa24.68■■□□□ 1.54
TUBD1-215ENST00000593110 ADRA2BP18089 450 aa23.66■■□□□ 1.38
TUBD1-215ENST00000593110 PPP6R1Q9UPN7 881 aa23.65■■□□□ 1.38
TUBD1-215ENST00000593110 PIAS4Q8N2W9 510 aaPredicted RBP23.32■■□□□ 1.32
TUBD1-215ENST00000593110 MSH5O43196 834 aa22.86■■□□□ 1.25
TUBD1-215ENST00000593110 ABCC9O60706 1549 aa22.83■■□□□ 1.25
TUBD1-215ENST00000593110 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
TUBD1-215ENST00000593110 DNAJC5BQ9UF47 199 aa21.87■■□□□ 1.09
TUBD1-215ENST00000593110 PPP4R3CPQ6ZMV5 832 aa21.81■■□□□ 1.08
TUBD1-215ENST00000593110 SCAF1Q9H7N4 1312 aaKnown RBP21.73■■□□□ 1.07
TUBD1-215ENST00000593110 RB1CC1Q8TDY2 1594 aa21.54■■□□□ 1.04
TUBD1-215ENST00000593110 MAPK8IP2Q13387 824 aaPredicted RBP21.47■■□□□ 1.03
TUBD1-215ENST00000593110 NACADO15069 1562 aa21.3■■□□□ 1
TUBD1-215ENST00000593110 NCBP3Q53F19 620 aaKnown RBP21.27■■□□□ 1
TUBD1-215ENST00000593110 CNKSR2Q8WXI2 1034 aa21.23■□□□□ 0.99
TUBD1-215ENST00000593110 DMRT2Q9Y5R5 561 aa21.22■□□□□ 0.99
TUBD1-215ENST00000593110 KCNA4P22459 653 aa21.2■□□□□ 0.98
TUBD1-215ENST00000593110 UNC13AQ9UPW8 1703 aa21.14■□□□□ 0.97
TUBD1-215ENST00000593110 PABPN1Q86U42 306 aaKnown RBP eCLIP21.11■□□□□ 0.97
TUBD1-215ENST00000593110 BICRAQ9NZM4 1560 aa21.04■□□□□ 0.96
TUBD1-215ENST00000593110 MYO15BQ96JP2 1530 aa20.9■□□□□ 0.94
TUBD1-215ENST00000593110 POTEDQ86YR6 584 aa20.9■□□□□ 0.94
TUBD1-215ENST00000593110 NPM3O75607 178 aaKnown RBP20.89■□□□□ 0.93
TUBD1-215ENST00000593110 RNF216Q9NWF9 866 aaPredicted RBP20.82■□□□□ 0.92
TUBD1-215ENST00000593110 DCAF8L2P0C7V8 631 aa20.81■□□□□ 0.92
TUBD1-215ENST00000593110 HOXD11P31277 338 aaPredicted RBP20.73■□□□□ 0.91
TUBD1-215ENST00000593110 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
TUBD1-215ENST00000593110 CC2D2AQ9P2K1 1620 aa20.65■□□□□ 0.9
TUBD1-215ENST00000593110 CECR2Q9BXF3 1484 aa20.62■□□□□ 0.89
TUBD1-215ENST00000593110 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
TUBD1-215ENST00000593110 ZCCHC6Q5VYS8 1495 aaKnown RBP20.45■□□□□ 0.86
TUBD1-215ENST00000593110 DCAF1Q9Y4B6 1507 aa20.45■□□□□ 0.86
TUBD1-215ENST00000593110 DCAF8L1A6NGE4 600 aa20.39■□□□□ 0.85
TUBD1-215ENST00000593110 DNAJC5Q9H3Z4 198 aa20.39■□□□□ 0.85
TUBD1-215ENST00000593110 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
TUBD1-215ENST00000593110 SLC4A1APQ9BWU0 796 aaKnown RBP20.21■□□□□ 0.83
TUBD1-215ENST00000593110 CUX2O14529 1486 aa19.92■□□□□ 0.78
TUBD1-215ENST00000593110 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.84■□□□□ 0.77
TUBD1-215ENST00000593110 SLC4A2P04920 1241 aa19.71■□□□□ 0.75
TUBD1-215ENST00000593110 ERCC6Q03468 1493 aa19.7■□□□□ 0.74
TUBD1-215ENST00000593110 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
TUBD1-215ENST00000593110 FOXD4L1Q9NU39 408 aa19.57■□□□□ 0.72
TUBD1-215ENST00000593110 EHMT2Q96KQ7 1210 aa19.56■□□□□ 0.72
TUBD1-215ENST00000593110 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
TUBD1-215ENST00000593110 HMGXB3Q12766 1538 aa19.52■□□□□ 0.72
TUBD1-215ENST00000593110 NESP48681 1621 aa19.52■□□□□ 0.72
TUBD1-215ENST00000593110 RNF39Q9H2S5 420 aa19.52■□□□□ 0.72
TUBD1-215ENST00000593110 THOC2Q8NI27 1593 aaKnown RBP19.5■□□□□ 0.71
TUBD1-215ENST00000593110 ZBTB22O15209 634 aa19.46■□□□□ 0.71
TUBD1-215ENST00000593110 U3KPZ7 1027 aaPredicted RBP19.44■□□□□ 0.7
TUBD1-215ENST00000593110 SMARCA2P51531 1590 aa19.44■□□□□ 0.7
TUBD1-215ENST00000593110 SMARCA4P51532 1647 aa19.43■□□□□ 0.7
TUBD1-215ENST00000593110 MYCNP04198 464 aaPredicted RBP19.36■□□□□ 0.69
TUBD1-215ENST00000593110 C1QBPQ07021 282 aaKnown RBP19.32■□□□□ 0.68
TUBD1-215ENST00000593110 CSRNP3Q8WYN3 585 aa19.3■□□□□ 0.68
TUBD1-215ENST00000593110 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
TUBD1-215ENST00000593110 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
TUBD1-215ENST00000593110 PEG3Q9GZU2 1588 aa19.28■□□□□ 0.68
TUBD1-215ENST00000593110 KIF21AQ7Z4S6 1674 aa19.27■□□□□ 0.68
TUBD1-215ENST00000593110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.25■□□□□ 0.67
TUBD1-215ENST00000593110 HNRNPUL2Q1KMD3 747 aaKnown RBP19.25■□□□□ 0.67
TUBD1-215ENST00000593110 BAZ1AQ9NRL2 1556 aaPredicted RBP19.22■□□□□ 0.67
TUBD1-215ENST00000593110 TRIM41Q8WV44 630 aa19.2■□□□□ 0.66
TUBD1-215ENST00000593110 SAMD1Q6SPF0 538 aaPredicted RBP19.16■□□□□ 0.66
TUBD1-215ENST00000593110 CACNB1Q02641 598 aaPredicted RBP19.14■□□□□ 0.65
TUBD1-215ENST00000593110 PDS5BQ9NTI5 1447 aa19.14■□□□□ 0.65
TUBD1-215ENST00000593110 APLP2Q06481 763 aa19.1■□□□□ 0.65
TUBD1-215ENST00000593110 WDR62O43379 1518 aa19.09■□□□□ 0.65
TUBD1-215ENST00000593110 MROH2BQ7Z745 1585 aa19.07■□□□□ 0.64
TUBD1-215ENST00000593110 MRC2Q9UBG0 1479 aa19.06■□□□□ 0.64
TUBD1-215ENST00000593110 CADPSQ9ULU8 1353 aa19.01■□□□□ 0.63
TUBD1-215ENST00000593110 CAPN15O75808 1086 aa18.92■□□□□ 0.62
TUBD1-215ENST00000593110 SPINK5Q9NQ38 1064 aaPredicted RBP18.92■□□□□ 0.62
TUBD1-215ENST00000593110 ATXN8OSP0DMR3 200 aa18.88■□□□□ 0.61
TUBD1-215ENST00000593110 CEP164Q9UPV0 1460 aa18.87■□□□□ 0.61
TUBD1-215ENST00000593110 ZNF219Q9P2Y4 722 aaPredicted RBP18.81■□□□□ 0.6
TUBD1-215ENST00000593110 FANCD2Q9BXW9 1451 aa18.81■□□□□ 0.6
TUBD1-215ENST00000593110 WIZO95785 1651 aa18.8■□□□□ 0.6
TUBD1-215ENST00000593110 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
TUBD1-215ENST00000593110 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
TUBD1-215ENST00000593110 ATF5Q9Y2D1 282 aaPredicted RBP18.76■□□□□ 0.59
TUBD1-215ENST00000593110 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
TUBD1-215ENST00000593110 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
TUBD1-215ENST00000593110 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
TUBD1-215ENST00000593110 CFTRP13569 1480 aa18.74■□□□□ 0.59
TUBD1-215ENST00000593110 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
TUBD1-215ENST00000593110 ARHGEF11O15085 1522 aa18.64■□□□□ 0.58
TUBD1-215ENST00000593110 ZNF608Q9ULD9 1512 aaPredicted RBP18.57■□□□□ 0.56
TUBD1-215ENST00000593110 DSG3P32926 999 aa18.56■□□□□ 0.56
TUBD1-215ENST00000593110 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
TUBD1-215ENST00000593110 PRDM2Q13029 1718 aa18.54■□□□□ 0.56
TUBD1-215ENST00000593110 ABCB7O75027 752 aa18.53■□□□□ 0.56
TUBD1-215ENST00000593110 IFT140Q96RY7 1462 aa18.51■□□□□ 0.55
TUBD1-215ENST00000593110 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms