RNA–Protein interactions for RNA: ENST00000591893.1

H3F3B-211, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 2,787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-211ENST00000591893 NISCHQ9Y2I1 1504 aa34.32■■■■□ 3.08
H3F3B-211ENST00000591893 SHROOM4Q9ULL8 1493 aa30.01■■■□□ 2.39
H3F3B-211ENST00000591893 HRCP23327 699 aa29.92■■■□□ 2.38
H3F3B-211ENST00000591893 SUPT5HO00267 1087 aaKnown RBP29.82■■■□□ 2.36
H3F3B-211ENST00000591893 MYO15BQ96JP2 1530 aa29.49■■■□□ 2.31
H3F3B-211ENST00000591893 CHIC1Q5VXU3 224 aa29.35■■■□□ 2.29
H3F3B-211ENST00000591893 PCGF6Q9BYE7 350 aa29.35■■■□□ 2.29
H3F3B-211ENST00000591893 DCAF8L2P0C7V8 631 aa29.24■■■□□ 2.27
H3F3B-211ENST00000591893 PPARGC1BQ86YN6 1023 aaKnown RBP29.2■■■□□ 2.26
H3F3B-211ENST00000591893 ZCCHC6Q5VYS8 1495 aaKnown RBP29.19■■■□□ 2.26
H3F3B-211ENST00000591893 DCAF1Q9Y4B6 1507 aa28.92■■■□□ 2.22
H3F3B-211ENST00000591893 CCDC180Q9P1Z9 1646 aa28.73■■■□□ 2.19
H3F3B-211ENST00000591893 LOC105371045A0A1W2PR82 267 aa28.57■■■□□ 2.16
H3F3B-211ENST00000591893 PELP1Q8IZL8 1130 aaKnown RBP28.57■■■□□ 2.16
H3F3B-211ENST00000591893 TRIM26Q12899 539 aaPredicted RBP28.56■■■□□ 2.16
H3F3B-211ENST00000591893 ZEB1P37275 1124 aaPredicted RBP28.3■■■□□ 2.12
H3F3B-211ENST00000591893 SCAF1Q9H7N4 1312 aaKnown RBP28.13■■■□□ 2.09
H3F3B-211ENST00000591893 ABCC9O60706 1549 aa27.92■■■□□ 2.06
H3F3B-211ENST00000591893 TRIM41Q8WV44 630 aa27.67■■■□□ 2.02
H3F3B-211ENST00000591893 ACIN1Q9UKV3 1341 aaKnown RBP27.56■■■□□ 2
H3F3B-211ENST00000591893 FAM9AQ8IZU1 332 aaPredicted RBP27.54■■■□□ 2
H3F3B-211ENST00000591893 RSF1Q96T23 1441 aaPredicted RBP27.51■■□□□ 1.99
H3F3B-211ENST00000591893 NEUROD1Q13562 356 aa27.45■■□□□ 1.98
H3F3B-211ENST00000591893 SCRIBQ14160 1630 aa27.43■■□□□ 1.98
H3F3B-211ENST00000591893 MYT1Q01538 1121 aa27.42■■□□□ 1.98
H3F3B-211ENST00000591893 RB1CC1Q8TDY2 1594 aa27.38■■□□□ 1.97
H3F3B-211ENST00000591893 EHMT2Q96KQ7 1210 aa27.33■■□□□ 1.97
H3F3B-211ENST00000591893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.29■■□□□ 1.96
H3F3B-211ENST00000591893 GTF3C3Q9Y5Q9 886 aa27.28■■□□□ 1.96
H3F3B-211ENST00000591893 CENPBP07199 599 aaPredicted RBP27.26■■□□□ 1.96
H3F3B-211ENST00000591893 CCER1Q8TC90 406 aaPredicted RBP27.26■■□□□ 1.95
H3F3B-211ENST00000591893 DIEXFQ68CQ4 756 aaKnown RBP27.2■■□□□ 1.95
H3F3B-211ENST00000591893 NACADO15069 1562 aa26.85■■□□□ 1.89
H3F3B-211ENST00000591893 PABPN1Q86U42 306 aaKnown RBP eCLIP26.83■■□□□ 1.89
H3F3B-211ENST00000591893 CECR2Q9BXF3 1484 aa26.8■■□□□ 1.88
H3F3B-211ENST00000591893 WRNQ14191 1432 aaPredicted RBP eCLIP26.77■■□□□ 1.88
H3F3B-211ENST00000591893 ZNF316A6NFI3 1004 aaPredicted RBP26.76■■□□□ 1.87
H3F3B-211ENST00000591893 MROH2BQ7Z745 1585 aa26.76■■□□□ 1.87
H3F3B-211ENST00000591893 WIZO95785 1651 aa26.69■■□□□ 1.86
H3F3B-211ENST00000591893 TTBK1Q5TCY1 1321 aaPredicted RBP26.68■■□□□ 1.86
H3F3B-211ENST00000591893 YTHDC1Q96MU7 727 aaKnown RBP26.65■■□□□ 1.86
H3F3B-211ENST00000591893 EIF4G1Q04637 1599 aaKnown RBP26.65■■□□□ 1.86
H3F3B-211ENST00000591893 CEP162Q5TB80 1403 aa26.59■■□□□ 1.85
H3F3B-211ENST00000591893 BAZ1AQ9NRL2 1556 aaPredicted RBP26.55■■□□□ 1.84
H3F3B-211ENST00000591893 MIER1Q8N108 512 aa26.51■■□□□ 1.83
H3F3B-211ENST00000591893 TNIKQ9UKE5 1360 aa26.47■■□□□ 1.83
H3F3B-211ENST00000591893 CCDC88BA6NC98 1476 aa26.44■■□□□ 1.82
H3F3B-211ENST00000591893 ABCC8Q09428 1581 aa26.41■■□□□ 1.82
H3F3B-211ENST00000591893 SOGA1O94964 1423 aa26.32■■□□□ 1.8
H3F3B-211ENST00000591893 EEA1Q15075 1411 aa26.26■■□□□ 1.8
H3F3B-211ENST00000591893 UBTFP17480 764 aaKnown RBP26.26■■□□□ 1.79
H3F3B-211ENST00000591893 CSRNP3Q8WYN3 585 aa26.24■■□□□ 1.79
H3F3B-211ENST00000591893 UNC13AQ9UPW8 1703 aa26.24■■□□□ 1.79
H3F3B-211ENST00000591893 TOP2AP11388 1531 aaKnown RBP26.21■■□□□ 1.79
H3F3B-211ENST00000591893 HNRNPUL2Q1KMD3 747 aaKnown RBP26.2■■□□□ 1.79
H3F3B-211ENST00000591893 GOLGA3Q08378 1498 aa26.16■■□□□ 1.78
H3F3B-211ENST00000591893 RUSC2Q8N2Y8 1516 aa26.16■■□□□ 1.78
H3F3B-211ENST00000591893 CLSPNQ9HAW4 1339 aa26.14■■□□□ 1.77
H3F3B-211ENST00000591893 SMARCA2P51531 1590 aa26.13■■□□□ 1.77
H3F3B-211ENST00000591893 SUPT16HQ9Y5B9 1047 aaKnown RBP26.05■■□□□ 1.76
H3F3B-211ENST00000591893 BICRAQ9NZM4 1560 aa26.02■■□□□ 1.76
H3F3B-211ENST00000591893 SMARCA4P51532 1647 aa25.97■■□□□ 1.75
H3F3B-211ENST00000591893 CEP164Q9UPV0 1460 aa25.92■■□□□ 1.74
H3F3B-211ENST00000591893 CLIP1P30622 1438 aa25.92■■□□□ 1.74
H3F3B-211ENST00000591893 VPS8Q8N3P4 1428 aa25.91■■□□□ 1.74
H3F3B-211ENST00000591893 KIF21BO75037 1637 aa25.88■■□□□ 1.73
H3F3B-211ENST00000591893 TSHZ2Q9NRE2 1034 aa25.87■■□□□ 1.73
H3F3B-211ENST00000591893 APLP2Q06481 763 aa25.86■■□□□ 1.73
H3F3B-211ENST00000591893 ANP32EQ9BTT0 268 aa25.84■■□□□ 1.73
H3F3B-211ENST00000591893 DHX57Q6P158 1386 aaKnown RBP25.78■■□□□ 1.72
H3F3B-211ENST00000591893 BAZ1BQ9UIG0 1483 aaKnown RBP25.73■■□□□ 1.71
H3F3B-211ENST00000591893 SYNJ1O43426 1573 aa25.68■■□□□ 1.7
H3F3B-211ENST00000591893 RAPGEF2Q9Y4G8 1499 aa25.64■■□□□ 1.69
H3F3B-211ENST00000591893 BCL11AQ9H165 835 aa25.57■■□□□ 1.68
H3F3B-211ENST00000591893 RANGAP1P46060 587 aaPredicted RBP25.56■■□□□ 1.68
H3F3B-211ENST00000591893 ATAD2BQ9ULI0 1458 aa25.5■■□□□ 1.67
H3F3B-211ENST00000591893 KCNH8Q96L42 1107 aa25.47■■□□□ 1.67
H3F3B-211ENST00000591893 BCANQ96GW7 911 aa25.45■■□□□ 1.66
H3F3B-211ENST00000591893 RRBP1Q9P2E9 1410 aaKnown RBP25.42■■□□□ 1.66
H3F3B-211ENST00000591893 CUX2O14529 1486 aa25.41■■□□□ 1.66
H3F3B-211ENST00000591893 KANK4Q5T7N3 995 aaPredicted RBP25.41■■□□□ 1.66
H3F3B-211ENST00000591893 FKBP8Q14318 412 aa25.39■■□□□ 1.66
H3F3B-211ENST00000591893 ARAP1Q96P48 1450 aa25.39■■□□□ 1.66
H3F3B-211ENST00000591893 PEG3Q9GZU2 1588 aa25.38■■□□□ 1.65
H3F3B-211ENST00000591893 ERICH3Q5RHP9 1530 aa25.31■■□□□ 1.64
H3F3B-211ENST00000591893 RBM19Q9Y4C8 960 aaKnown RBP25.29■■□□□ 1.64
H3F3B-211ENST00000591893 CCNB3Q8WWL7 1395 aa25.28■■□□□ 1.64
H3F3B-211ENST00000591893 TOP2BQ02880 1626 aa25.26■■□□□ 1.63
H3F3B-211ENST00000591893 PRXQ9BXM0 1461 aa25.25■■□□□ 1.63
H3F3B-211ENST00000591893 NEFLP07196 543 aa25.24■■□□□ 1.63
H3F3B-211ENST00000591893 MAPKBP1O60336 1514 aa25.22■■□□□ 1.63
H3F3B-211ENST00000591893 DDX10Q13206 875 aaKnown RBP25.2■■□□□ 1.62
H3F3B-211ENST00000591893 RAB3GAP2Q9H2M9 1393 aa25.19■■□□□ 1.62
H3F3B-211ENST00000591893 ITGAEP38570 1179 aa25.19■■□□□ 1.62
H3F3B-211ENST00000591893 BIVM-ERCC5R4GMW8 1640 aa25.14■■□□□ 1.62
H3F3B-211ENST00000591893 WDR97A6NE52 1622 aa25.12■■□□□ 1.61
H3F3B-211ENST00000591893 PPP1R15AO75807 674 aaPredicted RBP25.1■■□□□ 1.61
H3F3B-211ENST00000591893 CCER2I3L3R5 266 aa25.07■■□□□ 1.6
H3F3B-211ENST00000591893 TRIM52Q96A61 297 aa25.06■■□□□ 1.6
H3F3B-211ENST00000591893 DNAJC5BQ9UF47 199 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms