RNA–Protein interactions for RNA: ENST00000589641.1

RFX2-213, Transcript of regulatory factor X2, humanhuman

TSL 3

Gene RFX2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-213ENST00000589641 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
RFX2-213ENST00000589641 CHIC1Q5VXU3 224 aa18.18■□□□□ 0.5
RFX2-213ENST00000589641 SENP3Q9H4L4 574 aaPredicted RBP16.06■□□□□ 0.16
RFX2-213ENST00000589641 PHF23Q9BUL5 403 aaPredicted RBP16■□□□□ 0.15
RFX2-213ENST00000589641 FOXD1Q16676 465 aa14.99□□□□□ -0.01
RFX2-213ENST00000589641 NISCHQ9Y2I1 1504 aa14.65□□□□□ -0.06
RFX2-213ENST00000589641 PLPPR3Q6T4P5 718 aa14.6□□□□□ -0.07
RFX2-213ENST00000589641 PPP6R1Q9UPN7 881 aa14.21□□□□□ -0.13
RFX2-213ENST00000589641 ADRA2BP18089 450 aa14.17□□□□□ -0.14
RFX2-213ENST00000589641 PIAS4Q8N2W9 510 aaPredicted RBP14.03□□□□□ -0.16
RFX2-213ENST00000589641 MSH5O43196 834 aa13.89□□□□□ -0.19
RFX2-213ENST00000589641 POTEDQ86YR6 584 aa13.21□□□□□ -0.29
RFX2-213ENST00000589641 MAPK8IP2Q13387 824 aaPredicted RBP12.96□□□□□ -0.33
RFX2-213ENST00000589641 CCDC180Q9P1Z9 1646 aa12.93□□□□□ -0.34
RFX2-213ENST00000589641 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
RFX2-213ENST00000589641 PPP4R3CPQ6ZMV5 832 aa12.85□□□□□ -0.35
RFX2-213ENST00000589641 DMRT2Q9Y5R5 561 aa12.8□□□□□ -0.36
RFX2-213ENST00000589641 CNKSR2Q8WXI2 1034 aa12.54□□□□□ -0.4
RFX2-213ENST00000589641 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
RFX2-213ENST00000589641 NCBP3Q53F19 620 aaKnown RBP12.38□□□□□ -0.43
RFX2-213ENST00000589641 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
RFX2-213ENST00000589641 ZCCHC6Q5VYS8 1495 aaKnown RBP12.27□□□□□ -0.44
RFX2-213ENST00000589641 NPM3O75607 178 aaKnown RBP12.25□□□□□ -0.45
RFX2-213ENST00000589641 DCAF8L1A6NGE4 600 aa12.23□□□□□ -0.45
RFX2-213ENST00000589641 KCNA4P22459 653 aa12.23□□□□□ -0.45
RFX2-213ENST00000589641 ABCC9O60706 1549 aa12.19□□□□□ -0.46
RFX2-213ENST00000589641 DCAF1Q9Y4B6 1507 aa12.15□□□□□ -0.46
RFX2-213ENST00000589641 MYO15BQ96JP2 1530 aa12.06□□□□□ -0.48
RFX2-213ENST00000589641 NACADO15069 1562 aa12.01□□□□□ -0.49
RFX2-213ENST00000589641 DCAF8L2P0C7V8 631 aa12□□□□□ -0.49
RFX2-213ENST00000589641 RB1CC1Q8TDY2 1594 aa11.93□□□□□ -0.5
RFX2-213ENST00000589641 DNAJC5BQ9UF47 199 aa11.93□□□□□ -0.5
RFX2-213ENST00000589641 RNF39Q9H2S5 420 aa11.9□□□□□ -0.5
RFX2-213ENST00000589641 UNC13AQ9UPW8 1703 aa11.83□□□□□ -0.52
RFX2-213ENST00000589641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.52
RFX2-213ENST00000589641 CACNB1Q02641 598 aaPredicted RBP11.78□□□□□ -0.52
RFX2-213ENST00000589641 SCRIBQ14160 1630 aa11.76□□□□□ -0.53
RFX2-213ENST00000589641 SHROOM4Q9ULL8 1493 aa11.73□□□□□ -0.53
RFX2-213ENST00000589641 C1QBPQ07021 282 aaKnown RBP11.72□□□□□ -0.53
RFX2-213ENST00000589641 SLC4A2P04920 1241 aa11.67□□□□□ -0.54
RFX2-213ENST00000589641 U3KPZ7 1027 aaPredicted RBP11.62□□□□□ -0.55
RFX2-213ENST00000589641 BICRAQ9NZM4 1560 aa11.6□□□□□ -0.55
RFX2-213ENST00000589641 SLC4A1APQ9BWU0 796 aaKnown RBP11.56□□□□□ -0.56
RFX2-213ENST00000589641 PABPN1Q86U42 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
RFX2-213ENST00000589641 SPINK5Q9NQ38 1064 aaPredicted RBP11.39□□□□□ -0.59
RFX2-213ENST00000589641 CECR2Q9BXF3 1484 aa11.37□□□□□ -0.59
RFX2-213ENST00000589641 CAPN15O75808 1086 aa11.32□□□□□ -0.6
RFX2-213ENST00000589641 BAZ1AQ9NRL2 1556 aaPredicted RBP11.32□□□□□ -0.6
RFX2-213ENST00000589641 SMARCA4P51532 1647 aa11.31□□□□□ -0.6
RFX2-213ENST00000589641 FOXD4L1Q9NU39 408 aa11.31□□□□□ -0.6
RFX2-213ENST00000589641 MROH2BQ7Z745 1585 aa11.3□□□□□ -0.6
RFX2-213ENST00000589641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.3□□□□□ -0.6
RFX2-213ENST00000589641 HNRNPUL2Q1KMD3 747 aaKnown RBP11.3□□□□□ -0.6
RFX2-213ENST00000589641 MYCNP04198 464 aaPredicted RBP11.29□□□□□ -0.6
RFX2-213ENST00000589641 ZBTB22O15209 634 aa11.28□□□□□ -0.6
RFX2-213ENST00000589641 RSF1Q96T23 1441 aaPredicted RBP11.27□□□□□ -0.6
RFX2-213ENST00000589641 SAMD1Q6SPF0 538 aaPredicted RBP11.27□□□□□ -0.61
RFX2-213ENST00000589641 WIZO95785 1651 aa11.25□□□□□ -0.61
RFX2-213ENST00000589641 DSG3P32926 999 aa11.23□□□□□ -0.61
RFX2-213ENST00000589641 APLP2Q06481 763 aa11.23□□□□□ -0.61
RFX2-213ENST00000589641 EIF4G1Q04637 1599 aaKnown RBP11.23□□□□□ -0.61
RFX2-213ENST00000589641 SUPT5HO00267 1087 aaKnown RBP11.22□□□□□ -0.61
RFX2-213ENST00000589641 PEG3Q9GZU2 1588 aa11.2□□□□□ -0.62
RFX2-213ENST00000589641 TRHP20396 242 aaPredicted RBP11.19□□□□□ -0.62
RFX2-213ENST00000589641 ZNF219Q9P2Y4 722 aaPredicted RBP11.16□□□□□ -0.62
RFX2-213ENST00000589641 SMARCA2P51531 1590 aa11.13□□□□□ -0.63
RFX2-213ENST00000589641 ATAD2BQ9ULI0 1458 aa11.11□□□□□ -0.63
RFX2-213ENST00000589641 CC2D2AQ9P2K1 1620 aa11.1□□□□□ -0.63
RFX2-213ENST00000589641 TOP2AP11388 1531 aaKnown RBP11.09□□□□□ -0.63
RFX2-213ENST00000589641 ABCB7O75027 752 aa11.09□□□□□ -0.63
RFX2-213ENST00000589641 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
RFX2-213ENST00000589641 NCAPD3P42695 1498 aa11.06□□□□□ -0.64
RFX2-213ENST00000589641 HMGXB3Q12766 1538 aa11.05□□□□□ -0.64
RFX2-213ENST00000589641 BAZ1BQ9UIG0 1483 aaKnown RBP11.02□□□□□ -0.65
RFX2-213ENST00000589641 POLA2Q14181 598 aa10.97□□□□□ -0.65
RFX2-213ENST00000589641 CCDC88BA6NC98 1476 aa10.96□□□□□ -0.65
RFX2-213ENST00000589641 CSRNP3Q8WYN3 585 aa10.95□□□□□ -0.66
RFX2-213ENST00000589641 ATXN8OSP0DMR3 200 aa10.93□□□□□ -0.66
RFX2-213ENST00000589641 EHMT2Q96KQ7 1210 aa10.9□□□□□ -0.66
RFX2-213ENST00000589641 PRDM2Q13029 1718 aa10.88□□□□□ -0.67
RFX2-213ENST00000589641 CFTRP13569 1480 aa10.76□□□□□ -0.69
RFX2-213ENST00000589641 LAMC3Q9Y6N6 1575 aa10.73□□□□□ -0.69
RFX2-213ENST00000589641 CADPSQ9ULU8 1353 aa10.73□□□□□ -0.69
RFX2-213ENST00000589641 ZBTB12Q9Y330 459 aaPredicted RBP10.71□□□□□ -0.69
RFX2-213ENST00000589641 NESP48681 1621 aa10.69□□□□□ -0.7
RFX2-213ENST00000589641 ABCC8Q09428 1581 aa10.69□□□□□ -0.7
RFX2-213ENST00000589641 KIF21AQ7Z4S6 1674 aa10.66□□□□□ -0.7
RFX2-213ENST00000589641 RBM42Q9BTD8 480 aaKnown RBP10.65□□□□□ -0.7
RFX2-213ENST00000589641 BIVM-ERCC5R4GMW8 1640 aa10.64□□□□□ -0.71
RFX2-213ENST00000589641 SYNJ1O43426 1573 aa10.62□□□□□ -0.71
RFX2-213ENST00000589641 TOP2BQ02880 1626 aa10.61□□□□□ -0.71
RFX2-213ENST00000589641 FANCD2Q9BXW9 1451 aa10.61□□□□□ -0.71
RFX2-213ENST00000589641 WRNQ14191 1432 aaPredicted RBP eCLIP10.6□□□□□ -0.71
RFX2-213ENST00000589641 OSCARQ8IYS5 282 aa10.6□□□□□ -0.71
RFX2-213ENST00000589641 PDS5BQ9NTI5 1447 aa10.58□□□□□ -0.72
RFX2-213ENST00000589641 MKRN4PQ13434 485 aaPredicted RBP10.58□□□□□ -0.72
RFX2-213ENST00000589641 TRIM41Q8WV44 630 aa10.58□□□□□ -0.72
RFX2-213ENST00000589641 CUX1P39880 1505 aa10.57□□□□□ -0.72
RFX2-213ENST00000589641 CEP164Q9UPV0 1460 aa10.55□□□□□ -0.72
RFX2-213ENST00000589641 FBLN2P98095 1184 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms