RNA–Protein interactions for RNA: ENST00000589623.1

LINC00906-205, long intergenic non-protein coding RNA 906, humanhuman

TSL 2

Gene LINC00906, Length 392 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00906-205ENST00000589623 AEBP2Q6ZN18 517 aaPredicted RBP26.38■■□□□ 1.81
LINC00906-205ENST00000589623 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
LINC00906-205ENST00000589623 SENP3Q9H4L4 574 aaPredicted RBP22.69■■□□□ 1.22
LINC00906-205ENST00000589623 PHF23Q9BUL5 403 aaPredicted RBP22.29■■□□□ 1.16
LINC00906-205ENST00000589623 FOXD1Q16676 465 aa21.12■□□□□ 0.97
LINC00906-205ENST00000589623 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.93
LINC00906-205ENST00000589623 PLPPR3Q6T4P5 718 aa20.54■□□□□ 0.88
LINC00906-205ENST00000589623 POTEDQ86YR6 584 aa20.15■□□□□ 0.82
LINC00906-205ENST00000589623 MSH5O43196 834 aa20.02■□□□□ 0.8
LINC00906-205ENST00000589623 PIAS4Q8N2W9 510 aaPredicted RBP19.7■□□□□ 0.74
LINC00906-205ENST00000589623 PPP6R1Q9UPN7 881 aa19.59■□□□□ 0.73
LINC00906-205ENST00000589623 ADRA2BP18089 450 aa19.58■□□□□ 0.72
LINC00906-205ENST00000589623 ABCC9O60706 1549 aa18.98■□□□□ 0.63
LINC00906-205ENST00000589623 CCDC180Q9P1Z9 1646 aa18.84■□□□□ 0.61
LINC00906-205ENST00000589623 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
LINC00906-205ENST00000589623 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
LINC00906-205ENST00000589623 PPP4R3CPQ6ZMV5 832 aa18.04■□□□□ 0.48
LINC00906-205ENST00000589623 RB1CC1Q8TDY2 1594 aa17.99■□□□□ 0.47
LINC00906-205ENST00000589623 DMRT2Q9Y5R5 561 aa17.89■□□□□ 0.45
LINC00906-205ENST00000589623 MAPK8IP2Q13387 824 aaPredicted RBP17.87■□□□□ 0.45
LINC00906-205ENST00000589623 NACADO15069 1562 aa17.86■□□□□ 0.45
LINC00906-205ENST00000589623 UNC13AQ9UPW8 1703 aa17.7■□□□□ 0.42
LINC00906-205ENST00000589623 MYO15BQ96JP2 1530 aa17.66■□□□□ 0.42
LINC00906-205ENST00000589623 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
LINC00906-205ENST00000589623 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
LINC00906-205ENST00000589623 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
LINC00906-205ENST00000589623 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.4
LINC00906-205ENST00000589623 CACNB1Q02641 598 aaPredicted RBP17.43■□□□□ 0.38
LINC00906-205ENST00000589623 KCNA4P22459 653 aa17.42■□□□□ 0.38
LINC00906-205ENST00000589623 SHROOM4Q9ULL8 1493 aa17.35■□□□□ 0.37
LINC00906-205ENST00000589623 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
LINC00906-205ENST00000589623 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
LINC00906-205ENST00000589623 DCAF1Q9Y4B6 1507 aa17.29■□□□□ 0.36
LINC00906-205ENST00000589623 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
LINC00906-205ENST00000589623 NPM3O75607 178 aaKnown RBP17.25■□□□□ 0.35
LINC00906-205ENST00000589623 HOXD11P31277 338 aaPredicted RBP17.24■□□□□ 0.35
LINC00906-205ENST00000589623 ZCCHC6Q5VYS8 1495 aaKnown RBP17.23■□□□□ 0.35
LINC00906-205ENST00000589623 CC2D2AQ9P2K1 1620 aa17.22■□□□□ 0.35
LINC00906-205ENST00000589623 CECR2Q9BXF3 1484 aa17.17■□□□□ 0.34
LINC00906-205ENST00000589623 EIF4G1Q04637 1599 aaKnown RBP17.13■□□□□ 0.33
LINC00906-205ENST00000589623 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
LINC00906-205ENST00000589623 RNF39Q9H2S5 420 aa16.98■□□□□ 0.31
LINC00906-205ENST00000589623 DNAJC5Q9H3Z4 198 aa16.93■□□□□ 0.3
LINC00906-205ENST00000589623 C1QBPQ07021 282 aaKnown RBP16.76■□□□□ 0.27
LINC00906-205ENST00000589623 SLC4A1APQ9BWU0 796 aaKnown RBP16.62■□□□□ 0.25
LINC00906-205ENST00000589623 CUX2O14529 1486 aa16.58■□□□□ 0.24
LINC00906-205ENST00000589623 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
LINC00906-205ENST00000589623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.44■□□□□ 0.22
LINC00906-205ENST00000589623 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
LINC00906-205ENST00000589623 HMGXB3Q12766 1538 aa16.37■□□□□ 0.21
LINC00906-205ENST00000589623 ERCC6Q03468 1493 aa16.3■□□□□ 0.2
LINC00906-205ENST00000589623 NESP48681 1621 aa16.3■□□□□ 0.2
LINC00906-205ENST00000589623 SLC4A2P04920 1241 aa16.29■□□□□ 0.2
LINC00906-205ENST00000589623 SMARCA4P51532 1647 aa16.29■□□□□ 0.2
LINC00906-205ENST00000589623 SMARCA2P51531 1590 aa16.28■□□□□ 0.2
LINC00906-205ENST00000589623 THOC2Q8NI27 1593 aaKnown RBP16.27■□□□□ 0.2
LINC00906-205ENST00000589623 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
LINC00906-205ENST00000589623 FOXD4L1Q9NU39 408 aa16.15■□□□□ 0.18
LINC00906-205ENST00000589623 LAMC3Q9Y6N6 1575 aa16.15■□□□□ 0.18
LINC00906-205ENST00000589623 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
LINC00906-205ENST00000589623 BAZ1BQ9UIG0 1483 aaKnown RBP16.11■□□□□ 0.17
LINC00906-205ENST00000589623 U3KPZ7 1027 aaPredicted RBP16.1■□□□□ 0.17
LINC00906-205ENST00000589623 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
LINC00906-205ENST00000589623 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
LINC00906-205ENST00000589623 MYCNP04198 464 aaPredicted RBP16.02■□□□□ 0.16
LINC00906-205ENST00000589623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16■□□□□ 0.15
LINC00906-205ENST00000589623 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
LINC00906-205ENST00000589623 ZBTB22O15209 634 aa15.99■□□□□ 0.15
LINC00906-205ENST00000589623 PDS5BQ9NTI5 1447 aa15.98■□□□□ 0.15
LINC00906-205ENST00000589623 WDR62O43379 1518 aa15.96■□□□□ 0.15
LINC00906-205ENST00000589623 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
LINC00906-205ENST00000589623 CADPSQ9ULU8 1353 aa15.94■□□□□ 0.14
LINC00906-205ENST00000589623 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
LINC00906-205ENST00000589623 SAMD1Q6SPF0 538 aaPredicted RBP15.9■□□□□ 0.14
LINC00906-205ENST00000589623 APLP2Q06481 763 aa15.89■□□□□ 0.13
LINC00906-205ENST00000589623 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.12
LINC00906-205ENST00000589623 CAPN15O75808 1086 aa15.82■□□□□ 0.12
LINC00906-205ENST00000589623 WIZO95785 1651 aa15.78■□□□□ 0.12
LINC00906-205ENST00000589623 TRIM41Q8WV44 630 aa15.77■□□□□ 0.12
LINC00906-205ENST00000589623 DSG3P32926 999 aa15.76■□□□□ 0.11
LINC00906-205ENST00000589623 CFTRP13569 1480 aa15.76■□□□□ 0.11
LINC00906-205ENST00000589623 POTEHQ6S545 545 aa15.74■□□□□ 0.11
LINC00906-205ENST00000589623 SPINK5Q9NQ38 1064 aaPredicted RBP15.74■□□□□ 0.11
LINC00906-205ENST00000589623 CEP164Q9UPV0 1460 aa15.73■□□□□ 0.11
LINC00906-205ENST00000589623 FANCD2Q9BXW9 1451 aa15.72■□□□□ 0.11
LINC00906-205ENST00000589623 URB2Q14146 1524 aaKnown RBP15.69■□□□□ 0.1
LINC00906-205ENST00000589623 OSCARQ8IYS5 282 aa15.65■□□□□ 0.1
LINC00906-205ENST00000589623 ATXN8OSP0DMR3 200 aa15.64■□□□□ 0.09
LINC00906-205ENST00000589623 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
LINC00906-205ENST00000589623 RSF1Q96T23 1441 aaPredicted RBP15.6■□□□□ 0.09
LINC00906-205ENST00000589623 TOP2AP11388 1531 aaKnown RBP15.58■□□□□ 0.09
LINC00906-205ENST00000589623 RIMBP3CA6NJZ7 1639 aa15.58■□□□□ 0.09
LINC00906-205ENST00000589623 RIMBP3BA6NNM3 1639 aa15.58■□□□□ 0.09
LINC00906-205ENST00000589623 RIMBP3Q9UFD9 1639 aa15.58■□□□□ 0.09
LINC00906-205ENST00000589623 TRHP20396 242 aaPredicted RBP15.56■□□□□ 0.08
LINC00906-205ENST00000589623 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
LINC00906-205ENST00000589623 ZNF608Q9ULD9 1512 aaPredicted RBP15.52■□□□□ 0.07
LINC00906-205ENST00000589623 ARHGEF11O15085 1522 aa15.5■□□□□ 0.07
LINC00906-205ENST00000589623 IFT140Q96RY7 1462 aa15.48■□□□□ 0.07
LINC00906-205ENST00000589623 ATF5Q9Y2D1 282 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms