RNA–Protein interactions for RNA: ENST00000587127.1

UBE2O-204, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene UBE2O, Length 3,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-204ENST00000587127 NISCHQ9Y2I1 1504 aa21.38■■□□□ 1.01
UBE2O-204ENST00000587127 SHROOM4Q9ULL8 1493 aa18.86■□□□□ 0.61
UBE2O-204ENST00000587127 SUPT5HO00267 1087 aaKnown RBP18.65■□□□□ 0.58
UBE2O-204ENST00000587127 MYO15BQ96JP2 1530 aa18.25■□□□□ 0.51
UBE2O-204ENST00000587127 HRCP23327 699 aa18.23■□□□□ 0.51
UBE2O-204ENST00000587127 CHIC1Q5VXU3 224 aa18.18■□□□□ 0.5
UBE2O-204ENST00000587127 ZCCHC6Q5VYS8 1495 aaKnown RBP18.13■□□□□ 0.49
UBE2O-204ENST00000587127 PCGF6Q9BYE7 350 aa18.1■□□□□ 0.49
UBE2O-204ENST00000587127 DCAF8L2P0C7V8 631 aa18.02■□□□□ 0.47
UBE2O-204ENST00000587127 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
UBE2O-204ENST00000587127 LOC105371045A0A1W2PR82 267 aa17.81■□□□□ 0.44
UBE2O-204ENST00000587127 CCDC180Q9P1Z9 1646 aa17.8■□□□□ 0.44
UBE2O-204ENST00000587127 DCAF1Q9Y4B6 1507 aa17.63■□□□□ 0.41
UBE2O-204ENST00000587127 TRIM26Q12899 539 aaPredicted RBP17.5■□□□□ 0.39
UBE2O-204ENST00000587127 FAM9AQ8IZU1 332 aaPredicted RBP17.29■□□□□ 0.36
UBE2O-204ENST00000587127 EHMT2Q96KQ7 1210 aa17.27■□□□□ 0.36
UBE2O-204ENST00000587127 TRIM41Q8WV44 630 aa17.22■□□□□ 0.35
UBE2O-204ENST00000587127 ZEB1P37275 1124 aaPredicted RBP17.16■□□□□ 0.34
UBE2O-204ENST00000587127 ABCC9O60706 1549 aa17.15■□□□□ 0.34
UBE2O-204ENST00000587127 RSF1Q96T23 1441 aaPredicted RBP17.15■□□□□ 0.34
UBE2O-204ENST00000587127 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
UBE2O-204ENST00000587127 SCRIBQ14160 1630 aa17.04■□□□□ 0.32
UBE2O-204ENST00000587127 RB1CC1Q8TDY2 1594 aa17.04■□□□□ 0.32
UBE2O-204ENST00000587127 PELP1Q8IZL8 1130 aaKnown RBP16.98■□□□□ 0.31
UBE2O-204ENST00000587127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
UBE2O-204ENST00000587127 CECR2Q9BXF3 1484 aa16.82■□□□□ 0.28
UBE2O-204ENST00000587127 CCER1Q8TC90 406 aaPredicted RBP16.81■□□□□ 0.28
UBE2O-204ENST00000587127 NEUROD1Q13562 356 aa16.78■□□□□ 0.28
UBE2O-204ENST00000587127 TTBK1Q5TCY1 1321 aaPredicted RBP16.78■□□□□ 0.28
UBE2O-204ENST00000587127 ACIN1Q9UKV3 1341 aaKnown RBP16.74■□□□□ 0.27
UBE2O-204ENST00000587127 MROH2BQ7Z745 1585 aa16.74■□□□□ 0.27
UBE2O-204ENST00000587127 DIEXFQ68CQ4 756 aaKnown RBP16.66■□□□□ 0.26
UBE2O-204ENST00000587127 WIZO95785 1651 aa16.66■□□□□ 0.26
UBE2O-204ENST00000587127 GTF3C3Q9Y5Q9 886 aa16.64■□□□□ 0.25
UBE2O-204ENST00000587127 CENPBP07199 599 aaPredicted RBP16.52■□□□□ 0.23
UBE2O-204ENST00000587127 ABCC8Q09428 1581 aa16.49■□□□□ 0.23
UBE2O-204ENST00000587127 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
UBE2O-204ENST00000587127 EIF4G1Q04637 1599 aaKnown RBP16.47■□□□□ 0.23
UBE2O-204ENST00000587127 CEP162Q5TB80 1403 aa16.46■□□□□ 0.23
UBE2O-204ENST00000587127 NACADO15069 1562 aa16.45■□□□□ 0.22
UBE2O-204ENST00000587127 BAZ1AQ9NRL2 1556 aaPredicted RBP16.45■□□□□ 0.22
UBE2O-204ENST00000587127 YTHDC1Q96MU7 727 aaKnown RBP16.44■□□□□ 0.22
UBE2O-204ENST00000587127 SOGA1O94964 1423 aa16.43■□□□□ 0.22
UBE2O-204ENST00000587127 WRNQ14191 1432 aaPredicted RBP eCLIP16.42■□□□□ 0.22
UBE2O-204ENST00000587127 UBTFP17480 764 aaKnown RBP16.39■□□□□ 0.21
UBE2O-204ENST00000587127 ZNF316A6NFI3 1004 aaPredicted RBP16.39■□□□□ 0.21
UBE2O-204ENST00000587127 RUSC2Q8N2Y8 1516 aa16.37■□□□□ 0.21
UBE2O-204ENST00000587127 TNIKQ9UKE5 1360 aa16.34■□□□□ 0.21
UBE2O-204ENST00000587127 CSRNP3Q8WYN3 585 aa16.33■□□□□ 0.2
UBE2O-204ENST00000587127 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
UBE2O-204ENST00000587127 MIER1Q8N108 512 aa16.31■□□□□ 0.2
UBE2O-204ENST00000587127 TOP2AP11388 1531 aaKnown RBP16.28■□□□□ 0.2
UBE2O-204ENST00000587127 SMARCA2P51531 1590 aa16.25■□□□□ 0.19
UBE2O-204ENST00000587127 MYT1Q01538 1121 aa16.24■□□□□ 0.19
UBE2O-204ENST00000587127 SMARCA4P51532 1647 aa16.19■□□□□ 0.18
UBE2O-204ENST00000587127 RANGAP1P46060 587 aaPredicted RBP16.17■□□□□ 0.18
UBE2O-204ENST00000587127 GOLGA3Q08378 1498 aa16.17■□□□□ 0.18
UBE2O-204ENST00000587127 EEA1Q15075 1411 aa16.15■□□□□ 0.18
UBE2O-204ENST00000587127 CLIP1P30622 1438 aa16.07■□□□□ 0.16
UBE2O-204ENST00000587127 PABPN1Q86U42 306 aaKnown RBP eCLIP16.05■□□□□ 0.16
UBE2O-204ENST00000587127 CEP164Q9UPV0 1460 aa16.02■□□□□ 0.15
UBE2O-204ENST00000587127 APLP2Q06481 763 aa16.02■□□□□ 0.15
UBE2O-204ENST00000587127 VPS8Q8N3P4 1428 aa16■□□□□ 0.15
UBE2O-204ENST00000587127 SYNJ1O43426 1573 aa15.99■□□□□ 0.15
UBE2O-204ENST00000587127 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
UBE2O-204ENST00000587127 UNC13AQ9UPW8 1703 aa15.95■□□□□ 0.14
UBE2O-204ENST00000587127 KIF21BO75037 1637 aa15.93■□□□□ 0.14
UBE2O-204ENST00000587127 DHX57Q6P158 1386 aaKnown RBP15.89■□□□□ 0.13
UBE2O-204ENST00000587127 SUPT16HQ9Y5B9 1047 aaKnown RBP15.89■□□□□ 0.13
UBE2O-204ENST00000587127 KANK4Q5T7N3 995 aaPredicted RBP15.87■□□□□ 0.13
UBE2O-204ENST00000587127 BAZ1BQ9UIG0 1483 aaKnown RBP15.83■□□□□ 0.12
UBE2O-204ENST00000587127 KCNH8Q96L42 1107 aa15.8■□□□□ 0.12
UBE2O-204ENST00000587127 ITGAEP38570 1179 aa15.79■□□□□ 0.12
UBE2O-204ENST00000587127 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
UBE2O-204ENST00000587127 CLSPNQ9HAW4 1339 aa15.77■□□□□ 0.11
UBE2O-204ENST00000587127 ARAP1Q96P48 1450 aa15.75■□□□□ 0.11
UBE2O-204ENST00000587127 TSHZ2Q9NRE2 1034 aa15.75■□□□□ 0.11
UBE2O-204ENST00000587127 PEG3Q9GZU2 1588 aa15.74■□□□□ 0.11
UBE2O-204ENST00000587127 ATAD2BQ9ULI0 1458 aa15.74■□□□□ 0.11
UBE2O-204ENST00000587127 BCANQ96GW7 911 aa15.69■□□□□ 0.1
UBE2O-204ENST00000587127 PRXQ9BXM0 1461 aa15.67■□□□□ 0.1
UBE2O-204ENST00000587127 TOP2BQ02880 1626 aa15.66■□□□□ 0.1
UBE2O-204ENST00000587127 RRBP1Q9P2E9 1410 aaKnown RBP15.65■□□□□ 0.1
UBE2O-204ENST00000587127 CCNB3Q8WWL7 1395 aa15.64■□□□□ 0.09
UBE2O-204ENST00000587127 ERICH3Q5RHP9 1530 aa15.6■□□□□ 0.09
UBE2O-204ENST00000587127 DDX10Q13206 875 aaKnown RBP15.6■□□□□ 0.09
UBE2O-204ENST00000587127 RAB3GAP2Q9H2M9 1393 aa15.59■□□□□ 0.09
UBE2O-204ENST00000587127 SIN3AQ96ST3 1273 aa15.58■□□□□ 0.08
UBE2O-204ENST00000587127 FKBP8Q14318 412 aa15.57■□□□□ 0.08
UBE2O-204ENST00000587127 HIRIP3Q9BW71 556 aaPredicted RBP15.57■□□□□ 0.08
UBE2O-204ENST00000587127 CUX2O14529 1486 aa15.56■□□□□ 0.08
UBE2O-204ENST00000587127 ANP32EQ9BTT0 268 aa15.56■□□□□ 0.08
UBE2O-204ENST00000587127 ARHGAP35Q9NRY4 1499 aa15.56■□□□□ 0.08
UBE2O-204ENST00000587127 BIVM-ERCC5R4GMW8 1640 aa15.55■□□□□ 0.08
UBE2O-204ENST00000587127 MAPKBP1O60336 1514 aa15.54■□□□□ 0.08
UBE2O-204ENST00000587127 CUX1P39880 1505 aa15.53■□□□□ 0.08
UBE2O-204ENST00000587127 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
UBE2O-204ENST00000587127 FAM50AQ14320 339 aaKnown RBP15.49■□□□□ 0.07
UBE2O-204ENST00000587127 TRIM52Q96A61 297 aa15.49■□□□□ 0.07
UBE2O-204ENST00000587127 WDR97A6NE52 1622 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms