RNA–Protein interactions for RNA: ENST00000585802.6

CACNA1A-206, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-206ENST00000585802 NISCHQ9Y2I1 1504 aa37.52■■■■□ 3.6
CACNA1A-206ENST00000585802 SHROOM4Q9ULL8 1493 aa32.46■■■□□ 2.79
CACNA1A-206ENST00000585802 SUPT5HO00267 1087 aaKnown RBP31.87■■■□□ 2.69
CACNA1A-206ENST00000585802 ZCCHC6Q5VYS8 1495 aaKnown RBP31.72■■■□□ 2.67
CACNA1A-206ENST00000585802 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
CACNA1A-206ENST00000585802 DCAF8L2P0C7V8 631 aa31.51■■■□□ 2.63
CACNA1A-206ENST00000585802 CHIC1Q5VXU3 224 aa30.89■■■□□ 2.53
CACNA1A-206ENST00000585802 MYO15BQ96JP2 1530 aa30.85■■■□□ 2.53
CACNA1A-206ENST00000585802 DCAF1Q9Y4B6 1507 aa30.58■■■□□ 2.49
CACNA1A-206ENST00000585802 PCGF6Q9BYE7 350 aa30.18■■■□□ 2.42
CACNA1A-206ENST00000585802 LOC105371045A0A1W2PR82 267 aa30.15■■■□□ 2.42
CACNA1A-206ENST00000585802 HRCP23327 699 aa30.09■■■□□ 2.41
CACNA1A-206ENST00000585802 SCRIBQ14160 1630 aa30.01■■■□□ 2.39
CACNA1A-206ENST00000585802 ABCC9O60706 1549 aa29.95■■■□□ 2.39
CACNA1A-206ENST00000585802 RSF1Q96T23 1441 aaPredicted RBP29.81■■■□□ 2.36
CACNA1A-206ENST00000585802 PPARGC1BQ86YN6 1023 aaKnown RBP29.71■■■□□ 2.35
CACNA1A-206ENST00000585802 RB1CC1Q8TDY2 1594 aa29.57■■■□□ 2.32
CACNA1A-206ENST00000585802 TRIM41Q8WV44 630 aa29.54■■■□□ 2.32
CACNA1A-206ENST00000585802 FAM9AQ8IZU1 332 aaPredicted RBP29.51■■■□□ 2.32
CACNA1A-206ENST00000585802 CECR2Q9BXF3 1484 aa29.43■■■□□ 2.3
CACNA1A-206ENST00000585802 EHMT2Q96KQ7 1210 aa29.42■■■□□ 2.3
CACNA1A-206ENST00000585802 TRIM26Q12899 539 aaPredicted RBP29.38■■■□□ 2.29
CACNA1A-206ENST00000585802 NACADO15069 1562 aa29.31■■■□□ 2.28
CACNA1A-206ENST00000585802 MROH2BQ7Z745 1585 aa29.28■■■□□ 2.28
CACNA1A-206ENST00000585802 WIZO95785 1651 aa29.15■■■□□ 2.26
CACNA1A-206ENST00000585802 BAZ1AQ9NRL2 1556 aaPredicted RBP28.81■■■□□ 2.2
CACNA1A-206ENST00000585802 EIF4G1Q04637 1599 aaKnown RBP28.65■■■□□ 2.18
CACNA1A-206ENST00000585802 ZEB1P37275 1124 aaPredicted RBP28.64■■■□□ 2.18
CACNA1A-206ENST00000585802 ABCC8Q09428 1581 aa28.61■■■□□ 2.17
CACNA1A-206ENST00000585802 SMARCA4P51532 1647 aa28.55■■■□□ 2.16
CACNA1A-206ENST00000585802 CCDC88BA6NC98 1476 aa28.54■■■□□ 2.16
CACNA1A-206ENST00000585802 UNC13AQ9UPW8 1703 aa28.54■■■□□ 2.16
CACNA1A-206ENST00000585802 TOP2AP11388 1531 aaKnown RBP28.53■■■□□ 2.16
CACNA1A-206ENST00000585802 PABPN1Q86U42 306 aaKnown RBP eCLIP28.47■■■□□ 2.15
CACNA1A-206ENST00000585802 TTBK1Q5TCY1 1321 aaPredicted RBP28.46■■■□□ 2.15
CACNA1A-206ENST00000585802 SMARCA2P51531 1590 aa28.45■■■□□ 2.15
CACNA1A-206ENST00000585802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.4■■■□□ 2.14
CACNA1A-206ENST00000585802 SOGA1O94964 1423 aa28.36■■■□□ 2.13
CACNA1A-206ENST00000585802 RUSC2Q8N2Y8 1516 aa28.26■■■□□ 2.11
CACNA1A-206ENST00000585802 CCER1Q8TC90 406 aaPredicted RBP28.24■■■□□ 2.11
CACNA1A-206ENST00000585802 CEP162Q5TB80 1403 aa28.21■■■□□ 2.11
CACNA1A-206ENST00000585802 UBTFP17480 764 aaKnown RBP28.17■■■□□ 2.1
CACNA1A-206ENST00000585802 BICRAQ9NZM4 1560 aa28.16■■■□□ 2.1
CACNA1A-206ENST00000585802 CSRNP3Q8WYN3 585 aa28.15■■■□□ 2.1
CACNA1A-206ENST00000585802 TNIKQ9UKE5 1360 aa28.07■■■□□ 2.08
CACNA1A-206ENST00000585802 WRNQ14191 1432 aaPredicted RBP eCLIP28.06■■■□□ 2.08
CACNA1A-206ENST00000585802 EEA1Q15075 1411 aa27.94■■■□□ 2.06
CACNA1A-206ENST00000585802 SCAF1Q9H7N4 1312 aaKnown RBP27.9■■■□□ 2.06
CACNA1A-206ENST00000585802 GOLGA3Q08378 1498 aa27.89■■■□□ 2.06
CACNA1A-206ENST00000585802 SYNJ1O43426 1573 aa27.89■■■□□ 2.05
CACNA1A-206ENST00000585802 PEG3Q9GZU2 1588 aa27.87■■■□□ 2.05
CACNA1A-206ENST00000585802 ATAD2BQ9ULI0 1458 aa27.82■■■□□ 2.04
CACNA1A-206ENST00000585802 RANGAP1P46060 587 aaPredicted RBP27.81■■■□□ 2.04
CACNA1A-206ENST00000585802 BAZ1BQ9UIG0 1483 aaKnown RBP27.77■■■□□ 2.04
CACNA1A-206ENST00000585802 DIEXFQ68CQ4 756 aaKnown RBP27.71■■■□□ 2.03
CACNA1A-206ENST00000585802 CEP164Q9UPV0 1460 aa27.7■■■□□ 2.02
CACNA1A-206ENST00000585802 HNRNPUL2Q1KMD3 747 aaKnown RBP27.68■■■□□ 2.02
CACNA1A-206ENST00000585802 CLIP1P30622 1438 aa27.65■■■□□ 2.02
CACNA1A-206ENST00000585802 RAPGEF2Q9Y4G8 1499 aa27.63■■■□□ 2.01
CACNA1A-206ENST00000585802 KIF21BO75037 1637 aa27.61■■■□□ 2.01
CACNA1A-206ENST00000585802 NEUROD1Q13562 356 aa27.57■■■□□ 2
CACNA1A-206ENST00000585802 ACIN1Q9UKV3 1341 aaKnown RBP27.51■■□□□ 1.99
CACNA1A-206ENST00000585802 VPS8Q8N3P4 1428 aa27.49■■□□□ 1.99
CACNA1A-206ENST00000585802 APLP2Q06481 763 aa27.47■■□□□ 1.99
CACNA1A-206ENST00000585802 PELP1Q8IZL8 1130 aaKnown RBP27.45■■□□□ 1.98
CACNA1A-206ENST00000585802 TOP2BQ02880 1626 aa27.42■■□□□ 1.98
CACNA1A-206ENST00000585802 ZNF316A6NFI3 1004 aaPredicted RBP27.42■■□□□ 1.98
CACNA1A-206ENST00000585802 GTF3C3Q9Y5Q9 886 aa27.29■■□□□ 1.96
CACNA1A-206ENST00000585802 BIVM-ERCC5R4GMW8 1640 aa27.28■■□□□ 1.96
CACNA1A-206ENST00000585802 CENPBP07199 599 aaPredicted RBP27.26■■□□□ 1.95
CACNA1A-206ENST00000585802 YTHDC1Q96MU7 727 aaKnown RBP27.24■■□□□ 1.95
CACNA1A-206ENST00000585802 CUX1P39880 1505 aa27.22■■□□□ 1.95
CACNA1A-206ENST00000585802 PRXQ9BXM0 1461 aa27.21■■□□□ 1.95
CACNA1A-206ENST00000585802 KANK4Q5T7N3 995 aaPredicted RBP27.21■■□□□ 1.95
CACNA1A-206ENST00000585802 NCAPD3P42695 1498 aa27.18■■□□□ 1.94
CACNA1A-206ENST00000585802 ARAP1Q96P48 1450 aa27.17■■□□□ 1.94
CACNA1A-206ENST00000585802 MIER1Q8N108 512 aa27.16■■□□□ 1.94
CACNA1A-206ENST00000585802 ERICH3Q5RHP9 1530 aa27.13■■□□□ 1.93
CACNA1A-206ENST00000585802 HMGXB3Q12766 1538 aa27.13■■□□□ 1.93
CACNA1A-206ENST00000585802 KIF27Q86VH2 1401 aa27.08■■□□□ 1.93
CACNA1A-206ENST00000585802 CFTRP13569 1480 aa27.04■■□□□ 1.92
CACNA1A-206ENST00000585802 DHX57Q6P158 1386 aaKnown RBP26.97■■□□□ 1.91
CACNA1A-206ENST00000585802 ITGAEP38570 1179 aa26.97■■□□□ 1.91
CACNA1A-206ENST00000585802 ARHGAP35Q9NRY4 1499 aa26.93■■□□□ 1.9
CACNA1A-206ENST00000585802 CUX2O14529 1486 aa26.88■■□□□ 1.89
CACNA1A-206ENST00000585802 IGF1RP08069 1367 aa26.84■■□□□ 1.89
CACNA1A-206ENST00000585802 RRBP1Q9P2E9 1410 aaKnown RBP26.83■■□□□ 1.89
CACNA1A-206ENST00000585802 CCNB3Q8WWL7 1395 aa26.8■■□□□ 1.88
CACNA1A-206ENST00000585802 CLSPNQ9HAW4 1339 aa26.77■■□□□ 1.88
CACNA1A-206ENST00000585802 CADPSQ9ULU8 1353 aa26.75■■□□□ 1.87
CACNA1A-206ENST00000585802 P3H3Q8IVL6 736 aa26.74■■□□□ 1.87
CACNA1A-206ENST00000585802 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
CACNA1A-206ENST00000585802 CARMIL1Q5VZK9 1371 aa26.73■■□□□ 1.87
CACNA1A-206ENST00000585802 PRDM2Q13029 1718 aa26.7■■□□□ 1.87
CACNA1A-206ENST00000585802 ATP1B4Q9UN42 357 aaPredicted RBP26.68■■□□□ 1.86
CACNA1A-206ENST00000585802 RAB3GAP2Q9H2M9 1393 aa26.62■■□□□ 1.85
CACNA1A-206ENST00000585802 TIAM1Q13009 1591 aa26.6■■□□□ 1.85
CACNA1A-206ENST00000585802 FAM50AQ14320 339 aaKnown RBP26.58■■□□□ 1.85
CACNA1A-206ENST00000585802 PHLDB1Q86UU1 1377 aa26.57■■□□□ 1.84
CACNA1A-206ENST00000585802 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms