RNA–Protein interactions for RNA: ENST00000584433.2

CCDC144NL-AS1-219, CCDC144NL antisense RNA 1, humanhuman

TSL 4

Gene CCDC144NL-AS1, Length 556 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-219ENST00000584433 AEBP2Q6ZN18 517 aaPredicted RBP22.58■■□□□ 1.21
CCDC144NL-AS1-219ENST00000584433 CHIC1Q5VXU3 224 aa21.58■■□□□ 1.05
CCDC144NL-AS1-219ENST00000584433 SENP3Q9H4L4 574 aaPredicted RBP19.13■□□□□ 0.65
CCDC144NL-AS1-219ENST00000584433 PHF23Q9BUL5 403 aaPredicted RBP18.97■□□□□ 0.63
CCDC144NL-AS1-219ENST00000584433 FOXD1Q16676 465 aa17.86■□□□□ 0.45
CCDC144NL-AS1-219ENST00000584433 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
CCDC144NL-AS1-219ENST00000584433 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
CCDC144NL-AS1-219ENST00000584433 POTEDQ86YR6 584 aa16.93■□□□□ 0.3
CCDC144NL-AS1-219ENST00000584433 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
CCDC144NL-AS1-219ENST00000584433 ADRA2BP18089 450 aa16.8■□□□□ 0.28
CCDC144NL-AS1-219ENST00000584433 PIAS4Q8N2W9 510 aaPredicted RBP16.68■□□□□ 0.26
CCDC144NL-AS1-219ENST00000584433 MSH5O43196 834 aa16.65■□□□□ 0.26
CCDC144NL-AS1-219ENST00000584433 ABCC9O60706 1549 aa15.88■□□□□ 0.13
CCDC144NL-AS1-219ENST00000584433 CCDC180Q9P1Z9 1646 aa15.79■□□□□ 0.12
CCDC144NL-AS1-219ENST00000584433 MAPK8IP2Q13387 824 aaPredicted RBP15.39■□□□□ 0.05
CCDC144NL-AS1-219ENST00000584433 SCAF1Q9H7N4 1312 aaKnown RBP15.29■□□□□ 0.04
CCDC144NL-AS1-219ENST00000584433 DMRT2Q9Y5R5 561 aa15.24■□□□□ 0.03
CCDC144NL-AS1-219ENST00000584433 PPP4R3CPQ6ZMV5 832 aa15.19■□□□□ 0.02
CCDC144NL-AS1-219ENST00000584433 RB1CC1Q8TDY2 1594 aa15.06■□□□□ 0
CCDC144NL-AS1-219ENST00000584433 DCAF8L2P0C7V8 631 aa15□□□□□ -0.01
CCDC144NL-AS1-219ENST00000584433 NACADO15069 1562 aa14.95□□□□□ -0.02
CCDC144NL-AS1-219ENST00000584433 DNAJC5BQ9UF47 199 aa14.95□□□□□ -0.02
CCDC144NL-AS1-219ENST00000584433 CNKSR2Q8WXI2 1034 aa14.85□□□□□ -0.03
CCDC144NL-AS1-219ENST00000584433 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
CCDC144NL-AS1-219ENST00000584433 HOXD11P31277 338 aaPredicted RBP14.77□□□□□ -0.05
CCDC144NL-AS1-219ENST00000584433 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
CCDC144NL-AS1-219ENST00000584433 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.06
CCDC144NL-AS1-219ENST00000584433 RNF216Q9NWF9 866 aaPredicted RBP14.68□□□□□ -0.06
CCDC144NL-AS1-219ENST00000584433 BICRAQ9NZM4 1560 aa14.64□□□□□ -0.07
CCDC144NL-AS1-219ENST00000584433 NCBP3Q53F19 620 aaKnown RBP14.6□□□□□ -0.07
CCDC144NL-AS1-219ENST00000584433 ZCCHC6Q5VYS8 1495 aaKnown RBP14.59□□□□□ -0.07
CCDC144NL-AS1-219ENST00000584433 CACNB1Q02641 598 aaPredicted RBP14.56□□□□□ -0.08
CCDC144NL-AS1-219ENST00000584433 DCAF1Q9Y4B6 1507 aa14.52□□□□□ -0.08
CCDC144NL-AS1-219ENST00000584433 DCAF8L1A6NGE4 600 aa14.52□□□□□ -0.09
CCDC144NL-AS1-219ENST00000584433 NPM3O75607 178 aaKnown RBP14.48□□□□□ -0.09
CCDC144NL-AS1-219ENST00000584433 SCRIBQ14160 1630 aa14.43□□□□□ -0.1
CCDC144NL-AS1-219ENST00000584433 SHROOM4Q9ULL8 1493 aa14.38□□□□□ -0.11
CCDC144NL-AS1-219ENST00000584433 KCNA4P22459 653 aa14.37□□□□□ -0.11
CCDC144NL-AS1-219ENST00000584433 CC2D2AQ9P2K1 1620 aa14.33□□□□□ -0.12
CCDC144NL-AS1-219ENST00000584433 CECR2Q9BXF3 1484 aa14.29□□□□□ -0.12
CCDC144NL-AS1-219ENST00000584433 EIF4G1Q04637 1599 aaKnown RBP14.27□□□□□ -0.12
CCDC144NL-AS1-219ENST00000584433 RNF39Q9H2S5 420 aa14.21□□□□□ -0.13
CCDC144NL-AS1-219ENST00000584433 C1QBPQ07021 282 aaKnown RBP14.01□□□□□ -0.17
CCDC144NL-AS1-219ENST00000584433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.99□□□□□ -0.17
CCDC144NL-AS1-219ENST00000584433 NCAPD3P42695 1498 aa13.82□□□□□ -0.2
CCDC144NL-AS1-219ENST00000584433 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
CCDC144NL-AS1-219ENST00000584433 U3KPZ7 1027 aaPredicted RBP13.8□□□□□ -0.2
CCDC144NL-AS1-219ENST00000584433 ATAD2BQ9ULI0 1458 aa13.79□□□□□ -0.2
CCDC144NL-AS1-219ENST00000584433 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
CCDC144NL-AS1-219ENST00000584433 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
CCDC144NL-AS1-219ENST00000584433 DNAJC5Q9H3Z4 198 aa13.72□□□□□ -0.21
CCDC144NL-AS1-219ENST00000584433 ERCC6Q03468 1493 aa13.69□□□□□ -0.22
CCDC144NL-AS1-219ENST00000584433 HMGXB3Q12766 1538 aa13.68□□□□□ -0.22
CCDC144NL-AS1-219ENST00000584433 BAZ1AQ9NRL2 1556 aaPredicted RBP13.67□□□□□ -0.22
CCDC144NL-AS1-219ENST00000584433 CUX2O14529 1486 aa13.65□□□□□ -0.22
CCDC144NL-AS1-219ENST00000584433 BAZ1BQ9UIG0 1483 aaKnown RBP13.64□□□□□ -0.23
CCDC144NL-AS1-219ENST00000584433 NESP48681 1621 aa13.64□□□□□ -0.23
CCDC144NL-AS1-219ENST00000584433 MROH2BQ7Z745 1585 aa13.6□□□□□ -0.23
CCDC144NL-AS1-219ENST00000584433 PEG3Q9GZU2 1588 aa13.59□□□□□ -0.23
CCDC144NL-AS1-219ENST00000584433 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
CCDC144NL-AS1-219ENST00000584433 SPINK5Q9NQ38 1064 aaPredicted RBP13.53□□□□□ -0.24
CCDC144NL-AS1-219ENST00000584433 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
CCDC144NL-AS1-219ENST00000584433 THOC2Q8NI27 1593 aaKnown RBP13.45□□□□□ -0.26
CCDC144NL-AS1-219ENST00000584433 WIZO95785 1651 aa13.44□□□□□ -0.26
CCDC144NL-AS1-219ENST00000584433 KIF21AQ7Z4S6 1674 aa13.44□□□□□ -0.26
CCDC144NL-AS1-219ENST00000584433 PDS5BQ9NTI5 1447 aa13.44□□□□□ -0.26
CCDC144NL-AS1-219ENST00000584433 CAPN15O75808 1086 aa13.43□□□□□ -0.26
CCDC144NL-AS1-219ENST00000584433 CADPSQ9ULU8 1353 aa13.42□□□□□ -0.26
CCDC144NL-AS1-219ENST00000584433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.38□□□□□ -0.27
CCDC144NL-AS1-219ENST00000584433 DSG3P32926 999 aa13.38□□□□□ -0.27
CCDC144NL-AS1-219ENST00000584433 HNRNPUL2Q1KMD3 747 aaKnown RBP13.38□□□□□ -0.27
CCDC144NL-AS1-219ENST00000584433 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
CCDC144NL-AS1-219ENST00000584433 SAMD1Q6SPF0 538 aaPredicted RBP13.33□□□□□ -0.28
CCDC144NL-AS1-219ENST00000584433 FOXD4L1Q9NU39 408 aa13.32□□□□□ -0.28
CCDC144NL-AS1-219ENST00000584433 RSF1Q96T23 1441 aaPredicted RBP13.31□□□□□ -0.28
CCDC144NL-AS1-219ENST00000584433 MRC2Q9UBG0 1479 aa13.31□□□□□ -0.28
CCDC144NL-AS1-219ENST00000584433 APLP2Q06481 763 aa13.31□□□□□ -0.28
CCDC144NL-AS1-219ENST00000584433 ZBTB22O15209 634 aa13.27□□□□□ -0.29
CCDC144NL-AS1-219ENST00000584433 TRHP20396 242 aaPredicted RBP13.27□□□□□ -0.29
CCDC144NL-AS1-219ENST00000584433 WDR62O43379 1518 aa13.27□□□□□ -0.29
CCDC144NL-AS1-219ENST00000584433 CEP164Q9UPV0 1460 aa13.26□□□□□ -0.29
CCDC144NL-AS1-219ENST00000584433 FANCD2Q9BXW9 1451 aa13.25□□□□□ -0.29
CCDC144NL-AS1-219ENST00000584433 ZNF219Q9P2Y4 722 aaPredicted RBP13.25□□□□□ -0.29
CCDC144NL-AS1-219ENST00000584433 CFTRP13569 1480 aa13.24□□□□□ -0.29
CCDC144NL-AS1-219ENST00000584433 TOP2AP11388 1531 aaKnown RBP13.23□□□□□ -0.29
CCDC144NL-AS1-219ENST00000584433 POTEHQ6S545 545 aa13.19□□□□□ -0.3
CCDC144NL-AS1-219ENST00000584433 ABCB7O75027 752 aa13.16□□□□□ -0.3
CCDC144NL-AS1-219ENST00000584433 URB2Q14146 1524 aaKnown RBP13.14□□□□□ -0.31
CCDC144NL-AS1-219ENST00000584433 TRIM41Q8WV44 630 aa13.14□□□□□ -0.31
CCDC144NL-AS1-219ENST00000584433 CCDC88BA6NC98 1476 aa13.12□□□□□ -0.31
CCDC144NL-AS1-219ENST00000584433 ATF5Q9Y2D1 282 aaPredicted RBP13.1□□□□□ -0.31
CCDC144NL-AS1-219ENST00000584433 PRDM2Q13029 1718 aa13.09□□□□□ -0.31
CCDC144NL-AS1-219ENST00000584433 OSCARQ8IYS5 282 aa13.08□□□□□ -0.32
CCDC144NL-AS1-219ENST00000584433 TOPBP1Q92547 1522 aa13□□□□□ -0.33
CCDC144NL-AS1-219ENST00000584433 ZNF608Q9ULD9 1512 aaPredicted RBP13□□□□□ -0.33
CCDC144NL-AS1-219ENST00000584433 IFT140Q96RY7 1462 aa12.99□□□□□ -0.33
CCDC144NL-AS1-219ENST00000584433 POLA2Q14181 598 aa12.98□□□□□ -0.33
CCDC144NL-AS1-219ENST00000584433 ABCC8Q09428 1581 aa12.95□□□□□ -0.34
CCDC144NL-AS1-219ENST00000584433 DNMBPQ6XZF7 1577 aa12.93□□□□□ -0.34
CCDC144NL-AS1-219ENST00000584433 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms