RNA–Protein interactions for RNA: ENST00000578619.1

GAREM1-203, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

TSL 4

Gene GAREM1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-203ENST00000578619 AEBP2Q6ZN18 517 aaPredicted RBP16.5■□□□□ 0.23
GAREM1-203ENST00000578619 CHIC1Q5VXU3 224 aa15.82■□□□□ 0.12
GAREM1-203ENST00000578619 SENP3Q9H4L4 574 aaPredicted RBP14.07□□□□□ -0.16
GAREM1-203ENST00000578619 PHF23Q9BUL5 403 aaPredicted RBP13.9□□□□□ -0.18
GAREM1-203ENST00000578619 FOXD1Q16676 465 aa13.08□□□□□ -0.32
GAREM1-203ENST00000578619 PLPPR3Q6T4P5 718 aa12.71□□□□□ -0.37
GAREM1-203ENST00000578619 PPP6R1Q9UPN7 881 aa12.33□□□□□ -0.44
GAREM1-203ENST00000578619 ADRA2BP18089 450 aa12.3□□□□□ -0.44
GAREM1-203ENST00000578619 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
GAREM1-203ENST00000578619 MSH5O43196 834 aa12.2□□□□□ -0.46
GAREM1-203ENST00000578619 POTEDQ86YR6 584 aa11.84□□□□□ -0.51
GAREM1-203ENST00000578619 DNAJC5BQ9UF47 199 aa11.83□□□□□ -0.52
GAREM1-203ENST00000578619 ABCC9O60706 1549 aa11.61□□□□□ -0.55
GAREM1-203ENST00000578619 DNAJC5Q9H3Z4 198 aa11.58□□□□□ -0.56
GAREM1-203ENST00000578619 SCAF1Q9H7N4 1312 aaKnown RBP11.28□□□□□ -0.6
GAREM1-203ENST00000578619 MAPK8IP2Q13387 824 aaPredicted RBP11.24□□□□□ -0.61
GAREM1-203ENST00000578619 DMRT2Q9Y5R5 561 aa11.18□□□□□ -0.62
GAREM1-203ENST00000578619 PPP4R3CPQ6ZMV5 832 aa11.15□□□□□ -0.62
GAREM1-203ENST00000578619 NISCHQ9Y2I1 1504 aa11.14□□□□□ -0.63
GAREM1-203ENST00000578619 CNKSR2Q8WXI2 1034 aa10.92□□□□□ -0.66
GAREM1-203ENST00000578619 HOXD11P31277 338 aaPredicted RBP10.83□□□□□ -0.68
GAREM1-203ENST00000578619 RNF216Q9NWF9 866 aaPredicted RBP10.79□□□□□ -0.68
GAREM1-203ENST00000578619 NCBP3Q53F19 620 aaKnown RBP10.78□□□□□ -0.68
GAREM1-203ENST00000578619 TRIM41Q8WV44 630 aa10.76□□□□□ -0.69
GAREM1-203ENST00000578619 DCAF8L1A6NGE4 600 aa10.67□□□□□ -0.7
GAREM1-203ENST00000578619 PABPN1Q86U42 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
GAREM1-203ENST00000578619 NPM3O75607 178 aaKnown RBP10.61□□□□□ -0.71
GAREM1-203ENST00000578619 KCNA4P22459 653 aa10.53□□□□□ -0.72
GAREM1-203ENST00000578619 CECR2Q9BXF3 1484 aa10.53□□□□□ -0.72
GAREM1-203ENST00000578619 RB1CC1Q8TDY2 1594 aa10.47□□□□□ -0.73
GAREM1-203ENST00000578619 RNF39Q9H2S5 420 aa10.42□□□□□ -0.74
GAREM1-203ENST00000578619 CCDC180Q9P1Z9 1646 aa10.41□□□□□ -0.74
GAREM1-203ENST00000578619 CC2D2AQ9P2K1 1620 aa10.37□□□□□ -0.75
GAREM1-203ENST00000578619 CACNB1Q02641 598 aaPredicted RBP10.36□□□□□ -0.75
GAREM1-203ENST00000578619 CUX2O14529 1486 aa10.34□□□□□ -0.75
GAREM1-203ENST00000578619 C1QBPQ07021 282 aaKnown RBP10.29□□□□□ -0.76
GAREM1-203ENST00000578619 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.29□□□□□ -0.76
GAREM1-203ENST00000578619 BICRAQ9NZM4 1560 aa10.23□□□□□ -0.77
GAREM1-203ENST00000578619 UNC13AQ9UPW8 1703 aa10.23□□□□□ -0.77
GAREM1-203ENST00000578619 ILDR1Q86SU0 546 aaPredicted RBP10.2□□□□□ -0.78
GAREM1-203ENST00000578619 NACADO15069 1562 aa10.1□□□□□ -0.79
GAREM1-203ENST00000578619 U3KPZ7 1027 aaPredicted RBP10.1□□□□□ -0.79
GAREM1-203ENST00000578619 SLC4A2P04920 1241 aa10.09□□□□□ -0.79
GAREM1-203ENST00000578619 ERCC6Q03468 1493 aa10.08□□□□□ -0.8
GAREM1-203ENST00000578619 EIF4G1Q04637 1599 aaKnown RBP10.07□□□□□ -0.8
GAREM1-203ENST00000578619 DCAF8L2P0C7V8 631 aa9.99□□□□□ -0.81
GAREM1-203ENST00000578619 SLC4A1APQ9BWU0 796 aaKnown RBP9.96□□□□□ -0.82
GAREM1-203ENST00000578619 SPINK5Q9NQ38 1064 aaPredicted RBP9.91□□□□□ -0.82
GAREM1-203ENST00000578619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.89□□□□□ -0.83
GAREM1-203ENST00000578619 TRHP20396 242 aaPredicted RBP9.89□□□□□ -0.83
GAREM1-203ENST00000578619 HNRNPUL2Q1KMD3 747 aaKnown RBP9.89□□□□□ -0.83
GAREM1-203ENST00000578619 SHROOM4Q9ULL8 1493 aa9.88□□□□□ -0.83
GAREM1-203ENST00000578619 CAPN15O75808 1086 aa9.88□□□□□ -0.83
GAREM1-203ENST00000578619 APLP2Q06481 763 aa9.86□□□□□ -0.83
GAREM1-203ENST00000578619 MYCNP04198 464 aaPredicted RBP9.83□□□□□ -0.84
GAREM1-203ENST00000578619 SAMD1Q6SPF0 538 aaPredicted RBP9.83□□□□□ -0.84
GAREM1-203ENST00000578619 DSG3P32926 999 aa9.81□□□□□ -0.84
GAREM1-203ENST00000578619 FOXD4L1Q9NU39 408 aa9.79□□□□□ -0.84
GAREM1-203ENST00000578619 ZNF219Q9P2Y4 722 aaPredicted RBP9.77□□□□□ -0.85
GAREM1-203ENST00000578619 RIMBP3CA6NJZ7 1639 aa9.74□□□□□ -0.85
GAREM1-203ENST00000578619 RIMBP3BA6NNM3 1639 aa9.74□□□□□ -0.85
GAREM1-203ENST00000578619 RIMBP3Q9UFD9 1639 aa9.74□□□□□ -0.85
GAREM1-203ENST00000578619 THOC2Q8NI27 1593 aaKnown RBP9.72□□□□□ -0.85
GAREM1-203ENST00000578619 OSCARQ8IYS5 282 aa9.7□□□□□ -0.86
GAREM1-203ENST00000578619 BAZ1AQ9NRL2 1556 aaPredicted RBP9.7□□□□□ -0.86
GAREM1-203ENST00000578619 ZBTB22O15209 634 aa9.67□□□□□ -0.86
GAREM1-203ENST00000578619 NESP48681 1621 aa9.67□□□□□ -0.86
GAREM1-203ENST00000578619 ABCB7O75027 752 aa9.65□□□□□ -0.86
GAREM1-203ENST00000578619 SMARCA2P51531 1590 aa9.63□□□□□ -0.87
GAREM1-203ENST00000578619 CYB5RLQ6IPT4 315 aa9.62□□□□□ -0.87
GAREM1-203ENST00000578619 ARHGEF11O15085 1522 aa9.6□□□□□ -0.87
GAREM1-203ENST00000578619 SCRIBQ14160 1630 aa9.6□□□□□ -0.87
GAREM1-203ENST00000578619 LMTK3Q96Q04 1460 aa9.58□□□□□ -0.88
GAREM1-203ENST00000578619 ATF5Q9Y2D1 282 aaPredicted RBP9.56□□□□□ -0.88
GAREM1-203ENST00000578619 MYO15BQ96JP2 1530 aa9.54□□□□□ -0.88
GAREM1-203ENST00000578619 SOCS7O14512 581 aa9.53□□□□□ -0.88
GAREM1-203ENST00000578619 POLA2Q14181 598 aa9.53□□□□□ -0.88
GAREM1-203ENST00000578619 ATXN8OSP0DMR3 200 aa9.5□□□□□ -0.89
GAREM1-203ENST00000578619 ILDR2Q71H61 639 aa9.46□□□□□ -0.9
GAREM1-203ENST00000578619 KIF21AQ7Z4S6 1674 aa9.45□□□□□ -0.9
GAREM1-203ENST00000578619 ARAP1Q96P48 1450 aa9.45□□□□□ -0.9
GAREM1-203ENST00000578619 FBXO41Q8TF61 875 aa9.42□□□□□ -0.9
GAREM1-203ENST00000578619 CSRNP3Q8WYN3 585 aa9.37□□□□□ -0.91
GAREM1-203ENST00000578619 RBM42Q9BTD8 480 aaKnown RBP9.37□□□□□ -0.91
GAREM1-203ENST00000578619 ZBTB12Q9Y330 459 aaPredicted RBP9.37□□□□□ -0.91
GAREM1-203ENST00000578619 KDM4FA0A1W2PPD8 638 aa9.36□□□□□ -0.91
GAREM1-203ENST00000578619 NCAPD3P42695 1498 aa9.35□□□□□ -0.91
GAREM1-203ENST00000578619 MRC2Q9UBG0 1479 aa9.34□□□□□ -0.91
GAREM1-203ENST00000578619 ERCC6L2Q5T890 1561 aa9.33□□□□□ -0.92
GAREM1-203ENST00000578619 WDR62O43379 1518 aa9.32□□□□□ -0.92
GAREM1-203ENST00000578619 PDS5BQ9NTI5 1447 aa9.31□□□□□ -0.92
GAREM1-203ENST00000578619 DISP3Q9P2K9 1392 aa9.31□□□□□ -0.92
GAREM1-203ENST00000578619 LAMC3Q9Y6N6 1575 aa9.31□□□□□ -0.92
GAREM1-203ENST00000578619 EHMT2Q96KQ7 1210 aa9.29□□□□□ -0.92
GAREM1-203ENST00000578619 HECW2Q9P2P5 1572 aa9.27□□□□□ -0.93
GAREM1-203ENST00000578619 ATAD2BQ9ULI0 1458 aa9.21□□□□□ -0.93
GAREM1-203ENST00000578619 POTEHQ6S545 545 aa9.21□□□□□ -0.94
GAREM1-203ENST00000578619 FBLN2P98095 1184 aa9.19□□□□□ -0.94
GAREM1-203ENST00000578619 HMGXB3Q12766 1538 aa9.19□□□□□ -0.94
GAREM1-203ENST00000578619 AKT1S1Q96B36 256 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms