RNA–Protein interactions for RNA: ENST00000578507.2

STRADA-208, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 2

Gene STRADA, Length 2,788 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-208ENST00000578507 NISCHQ9Y2I1 1504 aa17.56■□□□□ 0.4
STRADA-208ENST00000578507 SLC24A1O60721 1099 aa16.44■□□□□ 0.22
STRADA-208ENST00000578507 ABCC9O60706 1549 aa16.3■□□□□ 0.2
STRADA-208ENST00000578507 CCDC180Q9P1Z9 1646 aa16.11■□□□□ 0.17
STRADA-208ENST00000578507 DNAJC5BQ9UF47 199 aa15.59■□□□□ 0.09
STRADA-208ENST00000578507 RB1CC1Q8TDY2 1594 aa15.5■□□□□ 0.07
STRADA-208ENST00000578507 NACADO15069 1562 aa15.31■□□□□ 0.04
STRADA-208ENST00000578507 DAXXQ9UER7 740 aaPredicted RBP15.07■□□□□ 0
STRADA-208ENST00000578507 UNC13AQ9UPW8 1703 aa15.05■□□□□ -0
STRADA-208ENST00000578507 MYO15BQ96JP2 1530 aa15.02□□□□□ -0.01
STRADA-208ENST00000578507 PABPN1Q86U42 306 aaKnown RBP eCLIP14.99□□□□□ -0.01
STRADA-208ENST00000578507 SHROOM4Q9ULL8 1493 aa14.98□□□□□ -0.01
STRADA-208ENST00000578507 BICRAQ9NZM4 1560 aa14.97□□□□□ -0.01
STRADA-208ENST00000578507 MYT1Q01538 1121 aa14.96□□□□□ -0.02
STRADA-208ENST00000578507 PRKCSHP14314 528 aaPredicted RBP14.93□□□□□ -0.02
STRADA-208ENST00000578507 EHMT2Q96KQ7 1210 aa14.89□□□□□ -0.03
STRADA-208ENST00000578507 TTBK1Q5TCY1 1321 aaPredicted RBP14.83□□□□□ -0.03
STRADA-208ENST00000578507 DNAJC5Q9H3Z4 198 aa14.82□□□□□ -0.04
STRADA-208ENST00000578507 CECR2Q9BXF3 1484 aa14.81□□□□□ -0.04
STRADA-208ENST00000578507 PLPPR3Q6T4P5 718 aa14.78□□□□□ -0.04
STRADA-208ENST00000578507 CC2D2AQ9P2K1 1620 aa14.78□□□□□ -0.04
STRADA-208ENST00000578507 PELP1Q8IZL8 1130 aaKnown RBP14.76□□□□□ -0.05
STRADA-208ENST00000578507 DCAF8L2P0C7V8 631 aa14.75□□□□□ -0.05
STRADA-208ENST00000578507 APLP2Q06481 763 aa14.75□□□□□ -0.05
STRADA-208ENST00000578507 EIF4G1Q04637 1599 aaKnown RBP14.65□□□□□ -0.06
STRADA-208ENST00000578507 RTN4Q9NQC3 1192 aaKnown RBP14.62□□□□□ -0.07
STRADA-208ENST00000578507 DCAF1Q9Y4B6 1507 aa14.62□□□□□ -0.07
STRADA-208ENST00000578507 ERICH6Q7L0X2 663 aa14.56□□□□□ -0.08
STRADA-208ENST00000578507 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
STRADA-208ENST00000578507 ZCCHC6Q5VYS8 1495 aaKnown RBP14.47□□□□□ -0.09
STRADA-208ENST00000578507 CUX2O14529 1486 aa14.45□□□□□ -0.1
STRADA-208ENST00000578507 SCRIBQ14160 1630 aa14.43□□□□□ -0.1
STRADA-208ENST00000578507 ERCC6Q03468 1493 aa14.18□□□□□ -0.14
STRADA-208ENST00000578507 CHIC1Q5VXU3 224 aa14.15□□□□□ -0.14
STRADA-208ENST00000578507 NCAPD3P42695 1498 aa14.08□□□□□ -0.16
STRADA-208ENST00000578507 TIMELESSQ9UNS1 1208 aa14.05□□□□□ -0.16
STRADA-208ENST00000578507 ARXQ96QS3 562 aa14.01□□□□□ -0.17
STRADA-208ENST00000578507 AMER1Q5JTC6 1135 aaPredicted RBP13.99□□□□□ -0.17
STRADA-208ENST00000578507 HMGXB3Q12766 1538 aa13.98□□□□□ -0.17
STRADA-208ENST00000578507 THOC2Q8NI27 1593 aaKnown RBP13.95□□□□□ -0.18
STRADA-208ENST00000578507 SMARCA2P51531 1590 aa13.94□□□□□ -0.18
STRADA-208ENST00000578507 EIF5BO60841 1220 aaKnown RBP13.92□□□□□ -0.18
STRADA-208ENST00000578507 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
STRADA-208ENST00000578507 KCNA4P22459 653 aa13.91□□□□□ -0.18
STRADA-208ENST00000578507 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
STRADA-208ENST00000578507 TRIM41Q8WV44 630 aa13.83□□□□□ -0.19
STRADA-208ENST00000578507 NESP48681 1621 aa13.83□□□□□ -0.2
STRADA-208ENST00000578507 SMARCA4P51532 1647 aa13.81□□□□□ -0.2
STRADA-208ENST00000578507 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
STRADA-208ENST00000578507 TULP1O00294 542 aaPredicted RBP13.79□□□□□ -0.2
STRADA-208ENST00000578507 PDS5BQ9NTI5 1447 aa13.77□□□□□ -0.2
STRADA-208ENST00000578507 BAZ1BQ9UIG0 1483 aaKnown RBP13.77□□□□□ -0.21
STRADA-208ENST00000578507 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
STRADA-208ENST00000578507 RANGAP1P46060 587 aaPredicted RBP13.75□□□□□ -0.21
STRADA-208ENST00000578507 KIF21AQ7Z4S6 1674 aa13.74□□□□□ -0.21
STRADA-208ENST00000578507 BAZ1AQ9NRL2 1556 aaPredicted RBP13.71□□□□□ -0.21
STRADA-208ENST00000578507 MRC2Q9UBG0 1479 aa13.68□□□□□ -0.22
STRADA-208ENST00000578507 WDR62O43379 1518 aa13.68□□□□□ -0.22
STRADA-208ENST00000578507 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
STRADA-208ENST00000578507 PLEKHG5O94827 1062 aa13.66□□□□□ -0.22
STRADA-208ENST00000578507 TAOK2Q9UL54 1235 aa13.59□□□□□ -0.23
STRADA-208ENST00000578507 CADPSQ9ULU8 1353 aa13.58□□□□□ -0.24
STRADA-208ENST00000578507 HOMEZQ8IX15 550 aa13.58□□□□□ -0.24
STRADA-208ENST00000578507 OSCARQ8IYS5 282 aa13.56□□□□□ -0.24
STRADA-208ENST00000578507 PODXL2Q9NZ53 605 aa13.52□□□□□ -0.25
STRADA-208ENST00000578507 CEP164Q9UPV0 1460 aa13.51□□□□□ -0.25
STRADA-208ENST00000578507 BCL11AQ9H165 835 aa13.48□□□□□ -0.25
STRADA-208ENST00000578507 RIMBP3CA6NJZ7 1639 aa13.47□□□□□ -0.25
STRADA-208ENST00000578507 RIMBP3BA6NNM3 1639 aa13.47□□□□□ -0.25
STRADA-208ENST00000578507 RIMBP3Q9UFD9 1639 aa13.47□□□□□ -0.25
STRADA-208ENST00000578507 MROH2BQ7Z745 1585 aa13.44□□□□□ -0.26
STRADA-208ENST00000578507 FANCD2Q9BXW9 1451 aa13.41□□□□□ -0.26
STRADA-208ENST00000578507 TPRNQ4KMQ1 711 aa13.41□□□□□ -0.26
STRADA-208ENST00000578507 ARHGEF11O15085 1522 aa13.37□□□□□ -0.27
STRADA-208ENST00000578507 CFTRP13569 1480 aa13.34□□□□□ -0.27
STRADA-208ENST00000578507 URB2Q14146 1524 aaKnown RBP13.31□□□□□ -0.28
STRADA-208ENST00000578507 IFT140Q96RY7 1462 aa13.3□□□□□ -0.28
STRADA-208ENST00000578507 PRDM2Q13029 1718 aa13.28□□□□□ -0.28
STRADA-208ENST00000578507 WIZO95785 1651 aa13.25□□□□□ -0.29
STRADA-208ENST00000578507 BCANQ96GW7 911 aa13.24□□□□□ -0.29
STRADA-208ENST00000578507 RSF1Q96T23 1441 aaPredicted RBP13.23□□□□□ -0.29
STRADA-208ENST00000578507 AEBP2Q6ZN18 517 aaPredicted RBP13.23□□□□□ -0.29
STRADA-208ENST00000578507 FAM9AQ8IZU1 332 aaPredicted RBP13.23□□□□□ -0.29
STRADA-208ENST00000578507 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
STRADA-208ENST00000578507 ABCC8Q09428 1581 aa13.19□□□□□ -0.3
STRADA-208ENST00000578507 TRHP20396 242 aaPredicted RBP13.19□□□□□ -0.3
STRADA-208ENST00000578507 ARAP1Q96P48 1450 aa13.19□□□□□ -0.3
STRADA-208ENST00000578507 NPM2Q86SE8 214 aaKnown RBP13.19□□□□□ -0.3
STRADA-208ENST00000578507 HRCP23327 699 aa13.17□□□□□ -0.3
STRADA-208ENST00000578507 TOP2AP11388 1531 aaKnown RBP13.17□□□□□ -0.3
STRADA-208ENST00000578507 EIF4G3O43432 1585 aaKnown RBP13.17□□□□□ -0.3
STRADA-208ENST00000578507 CYB5RLQ6IPT4 315 aa13.16□□□□□ -0.3
STRADA-208ENST00000578507 ZNF608Q9ULD9 1512 aaPredicted RBP13.16□□□□□ -0.3
STRADA-208ENST00000578507 CHD1O14646 1710 aa13.15□□□□□ -0.3
STRADA-208ENST00000578507 TOPBP1Q92547 1522 aa13.11□□□□□ -0.31
STRADA-208ENST00000578507 DNMBPQ6XZF7 1577 aa13.09□□□□□ -0.31
STRADA-208ENST00000578507 WDR97A6NE52 1622 aa13.08□□□□□ -0.32
STRADA-208ENST00000578507 C14orf37Q86TY3 774 aa13.08□□□□□ -0.32
STRADA-208ENST00000578507 TARBP1Q13395 1621 aaKnown RBP13.05□□□□□ -0.32
STRADA-208ENST00000578507 CLASP1Q7Z460 1538 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms