RNA–Protein interactions for RNA: ENST00000576573.1

EIF4A3-208, Transcript of eukaryotic translation initiation factor 4A3, humanhuman

TSL 2

Gene EIF4A3, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A3-208ENST00000576573 AEBP2Q6ZN18 517 aaPredicted RBP24.7■■□□□ 1.54
EIF4A3-208ENST00000576573 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
EIF4A3-208ENST00000576573 PHF23Q9BUL5 403 aaPredicted RBP21.38■■□□□ 1.01
EIF4A3-208ENST00000576573 SENP3Q9H4L4 574 aaPredicted RBP20.87■□□□□ 0.93
EIF4A3-208ENST00000576573 NISCHQ9Y2I1 1504 aa20.77■□□□□ 0.92
EIF4A3-208ENST00000576573 PLPPR3Q6T4P5 718 aa20.05■□□□□ 0.8
EIF4A3-208ENST00000576573 ABCC9O60706 1549 aa19.53■□□□□ 0.72
EIF4A3-208ENST00000576573 FOXD1Q16676 465 aa19.4■□□□□ 0.7
EIF4A3-208ENST00000576573 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
EIF4A3-208ENST00000576573 CCDC180Q9P1Z9 1646 aa18.81■□□□□ 0.6
EIF4A3-208ENST00000576573 ADRA2BP18089 450 aa18.76■□□□□ 0.59
EIF4A3-208ENST00000576573 PPP6R1Q9UPN7 881 aa18.72■□□□□ 0.59
EIF4A3-208ENST00000576573 PIAS4Q8N2W9 510 aaPredicted RBP18.24■□□□□ 0.51
EIF4A3-208ENST00000576573 RB1CC1Q8TDY2 1594 aa18.19■□□□□ 0.5
EIF4A3-208ENST00000576573 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
EIF4A3-208ENST00000576573 UNC13AQ9UPW8 1703 aa17.92■□□□□ 0.46
EIF4A3-208ENST00000576573 DCAF8L2P0C7V8 631 aa17.91■□□□□ 0.46
EIF4A3-208ENST00000576573 NACADO15069 1562 aa17.91■□□□□ 0.46
EIF4A3-208ENST00000576573 MSH5O43196 834 aa17.82■□□□□ 0.44
EIF4A3-208ENST00000576573 KCNA4P22459 653 aa17.82■□□□□ 0.44
EIF4A3-208ENST00000576573 BICRAQ9NZM4 1560 aa17.8■□□□□ 0.44
EIF4A3-208ENST00000576573 PPP4R3CPQ6ZMV5 832 aa17.7■□□□□ 0.42
EIF4A3-208ENST00000576573 DNAJC5Q9H3Z4 198 aa17.65■□□□□ 0.42
EIF4A3-208ENST00000576573 CECR2Q9BXF3 1484 aa17.59■□□□□ 0.41
EIF4A3-208ENST00000576573 CC2D2AQ9P2K1 1620 aa17.57■□□□□ 0.4
EIF4A3-208ENST00000576573 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
EIF4A3-208ENST00000576573 MYO15BQ96JP2 1530 aa17.41■□□□□ 0.38
EIF4A3-208ENST00000576573 EIF4G1Q04637 1599 aaKnown RBP17.36■□□□□ 0.37
EIF4A3-208ENST00000576573 POTEDQ86YR6 584 aa17.34■□□□□ 0.37
EIF4A3-208ENST00000576573 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
EIF4A3-208ENST00000576573 SHROOM4Q9ULL8 1493 aa17.25■□□□□ 0.35
EIF4A3-208ENST00000576573 SCRIBQ14160 1630 aa17.25■□□□□ 0.35
EIF4A3-208ENST00000576573 EHMT2Q96KQ7 1210 aa17.24■□□□□ 0.35
EIF4A3-208ENST00000576573 SLC4A1APQ9BWU0 796 aaKnown RBP17.14■□□□□ 0.33
EIF4A3-208ENST00000576573 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
EIF4A3-208ENST00000576573 NPM3O75607 178 aaKnown RBP17.1■□□□□ 0.33
EIF4A3-208ENST00000576573 ZCCHC6Q5VYS8 1495 aaKnown RBP17.07■□□□□ 0.32
EIF4A3-208ENST00000576573 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
EIF4A3-208ENST00000576573 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
EIF4A3-208ENST00000576573 CUX2O14529 1486 aa16.9■□□□□ 0.3
EIF4A3-208ENST00000576573 ERCC6Q03468 1493 aa16.81■□□□□ 0.28
EIF4A3-208ENST00000576573 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
EIF4A3-208ENST00000576573 CSRNP3Q8WYN3 585 aa16.72■□□□□ 0.27
EIF4A3-208ENST00000576573 DMRT2Q9Y5R5 561 aa16.7■□□□□ 0.26
EIF4A3-208ENST00000576573 NESP48681 1621 aa16.65■□□□□ 0.26
EIF4A3-208ENST00000576573 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
EIF4A3-208ENST00000576573 NCAPD3P42695 1498 aa16.58■□□□□ 0.24
EIF4A3-208ENST00000576573 THOC2Q8NI27 1593 aaKnown RBP16.5■□□□□ 0.23
EIF4A3-208ENST00000576573 ATAD2BQ9ULI0 1458 aa16.49■□□□□ 0.23
EIF4A3-208ENST00000576573 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
EIF4A3-208ENST00000576573 HOXD11P31277 338 aaPredicted RBP16.4■□□□□ 0.22
EIF4A3-208ENST00000576573 KIF21AQ7Z4S6 1674 aa16.37■□□□□ 0.21
EIF4A3-208ENST00000576573 HMGXB3Q12766 1538 aa16.37■□□□□ 0.21
EIF4A3-208ENST00000576573 ZBTB22O15209 634 aa16.35■□□□□ 0.21
EIF4A3-208ENST00000576573 SMARCA4P51532 1647 aa16.34■□□□□ 0.21
EIF4A3-208ENST00000576573 FOXD4L1Q9NU39 408 aa16.31■□□□□ 0.2
EIF4A3-208ENST00000576573 BAZ1BQ9UIG0 1483 aaKnown RBP16.28■□□□□ 0.2
EIF4A3-208ENST00000576573 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
EIF4A3-208ENST00000576573 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
EIF4A3-208ENST00000576573 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
EIF4A3-208ENST00000576573 MRC2Q9UBG0 1479 aa16.12■□□□□ 0.17
EIF4A3-208ENST00000576573 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
EIF4A3-208ENST00000576573 PEG3Q9GZU2 1588 aa16.11■□□□□ 0.17
EIF4A3-208ENST00000576573 WDR62O43379 1518 aa16.1■□□□□ 0.17
EIF4A3-208ENST00000576573 MROH2BQ7Z745 1585 aa16.07■□□□□ 0.16
EIF4A3-208ENST00000576573 CADPSQ9ULU8 1353 aa16.06■□□□□ 0.16
EIF4A3-208ENST00000576573 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
EIF4A3-208ENST00000576573 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
EIF4A3-208ENST00000576573 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
EIF4A3-208ENST00000576573 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
EIF4A3-208ENST00000576573 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
EIF4A3-208ENST00000576573 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
EIF4A3-208ENST00000576573 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
EIF4A3-208ENST00000576573 ARHGEF11O15085 1522 aa15.88■□□□□ 0.13
EIF4A3-208ENST00000576573 WIZO95785 1651 aa15.87■□□□□ 0.13
EIF4A3-208ENST00000576573 URB2Q14146 1524 aaKnown RBP15.86■□□□□ 0.13
EIF4A3-208ENST00000576573 MYCNP04198 464 aaPredicted RBP15.85■□□□□ 0.13
EIF4A3-208ENST00000576573 CYB5RLQ6IPT4 315 aa15.85■□□□□ 0.13
EIF4A3-208ENST00000576573 TRHP20396 242 aaPredicted RBP15.84■□□□□ 0.13
EIF4A3-208ENST00000576573 ZNF608Q9ULD9 1512 aaPredicted RBP15.79■□□□□ 0.12
EIF4A3-208ENST00000576573 CFTRP13569 1480 aa15.76■□□□□ 0.11
EIF4A3-208ENST00000576573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.73■□□□□ 0.11
EIF4A3-208ENST00000576573 ATXN8OSP0DMR3 200 aa15.72■□□□□ 0.11
EIF4A3-208ENST00000576573 ARAP1Q96P48 1450 aa15.71■□□□□ 0.1
EIF4A3-208ENST00000576573 CHD1O14646 1710 aa15.64■□□□□ 0.09
EIF4A3-208ENST00000576573 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
EIF4A3-208ENST00000576573 EIF4G3O43432 1585 aaKnown RBP15.61■□□□□ 0.09
EIF4A3-208ENST00000576573 FBLN2P98095 1184 aa15.58■□□□□ 0.08
EIF4A3-208ENST00000576573 AQRO60306 1485 aaKnown RBP eCLIP15.57■□□□□ 0.083e-6■■■■□ 24.7
EIF4A3-208ENST00000576573 TOPBP1Q92547 1522 aa15.55■□□□□ 0.08
EIF4A3-208ENST00000576573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
EIF4A3-208ENST00000576573 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
EIF4A3-208ENST00000576573 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
EIF4A3-208ENST00000576573 TOP2AP11388 1531 aaKnown RBP15.52■□□□□ 0.07
EIF4A3-208ENST00000576573 RSF1Q96T23 1441 aaPredicted RBP15.5■□□□□ 0.07
EIF4A3-208ENST00000576573 SAMD1Q6SPF0 538 aaPredicted RBP15.48■□□□□ 0.07
EIF4A3-208ENST00000576573 TARBP1Q13395 1621 aaKnown RBP15.47■□□□□ 0.07
EIF4A3-208ENST00000576573 CCDC88BA6NC98 1476 aa15.42■□□□□ 0.06
EIF4A3-208ENST00000576573 U3KPZ7 1027 aaPredicted RBP15.42■□□□□ 0.06
EIF4A3-208ENST00000576573 DNMBPQ6XZF7 1577 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms