RNA–Protein interactions for RNA: ENST00000574028.1

BCAR4-205, Transcript of breast cancer anti-estrogen resistance 4, humanhuman

TSL 2

Gene BCAR4, Length 470 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR4-205ENST00000574028 AEBP2Q6ZN18 517 aaPredicted RBP12.21□□□□□ -0.45
BCAR4-205ENST00000574028 CHIC1Q5VXU3 224 aa11.98□□□□□ -0.49
BCAR4-205ENST00000574028 PHF23Q9BUL5 403 aaPredicted RBP10.55□□□□□ -0.72
BCAR4-205ENST00000574028 SENP3Q9H4L4 574 aaPredicted RBP10.33□□□□□ -0.76
BCAR4-205ENST00000574028 NISCHQ9Y2I1 1504 aa10.14□□□□□ -0.79
BCAR4-205ENST00000574028 PLPPR3Q6T4P5 718 aa9.76□□□□□ -0.85
BCAR4-205ENST00000574028 FOXD1Q16676 465 aa9.6□□□□□ -0.87
BCAR4-205ENST00000574028 ADRA2BP18089 450 aa9.32□□□□□ -0.92
BCAR4-205ENST00000574028 PPP6R1Q9UPN7 881 aa9.3□□□□□ -0.92
BCAR4-205ENST00000574028 PIAS4Q8N2W9 510 aaPredicted RBP9.1□□□□□ -0.95
BCAR4-205ENST00000574028 CCDC180Q9P1Z9 1646 aa8.94□□□□□ -0.98
BCAR4-205ENST00000574028 ABCC9O60706 1549 aa8.85□□□□□ -0.99
BCAR4-205ENST00000574028 MSH5O43196 834 aa8.8□□□□□ -1
BCAR4-205ENST00000574028 DCAF8L2P0C7V8 631 aa8.75□□□□□ -1.01
BCAR4-205ENST00000574028 PPP4R3CPQ6ZMV5 832 aa8.63□□□□□ -1.03
BCAR4-205ENST00000574028 KCNA4P22459 653 aa8.54□□□□□ -1.04
BCAR4-205ENST00000574028 SCAF1Q9H7N4 1312 aaKnown RBP8.48□□□□□ -1.05
BCAR4-205ENST00000574028 MAPK8IP2Q13387 824 aaPredicted RBP8.43□□□□□ -1.06
BCAR4-205ENST00000574028 ZCCHC6Q5VYS8 1495 aaKnown RBP8.43□□□□□ -1.06
BCAR4-205ENST00000574028 RB1CC1Q8TDY2 1594 aa8.43□□□□□ -1.06
BCAR4-205ENST00000574028 NCBP3Q53F19 620 aaKnown RBP8.41□□□□□ -1.06
BCAR4-205ENST00000574028 NACADO15069 1562 aa8.39□□□□□ -1.07
BCAR4-205ENST00000574028 CNKSR2Q8WXI2 1034 aa8.35□□□□□ -1.07
BCAR4-205ENST00000574028 UNC13AQ9UPW8 1703 aa8.34□□□□□ -1.07
BCAR4-205ENST00000574028 PABPN1Q86U42 306 aaKnown RBP eCLIP8.34□□□□□ -1.07
BCAR4-205ENST00000574028 SCRIBQ14160 1630 aa8.33□□□□□ -1.08
BCAR4-205ENST00000574028 SHROOM4Q9ULL8 1493 aa8.32□□□□□ -1.08
BCAR4-205ENST00000574028 NPM3O75607 178 aaKnown RBP8.31□□□□□ -1.08
BCAR4-205ENST00000574028 DCAF1Q9Y4B6 1507 aa8.27□□□□□ -1.09
BCAR4-205ENST00000574028 DMRT2Q9Y5R5 561 aa8.25□□□□□ -1.09
BCAR4-205ENST00000574028 MYO15BQ96JP2 1530 aa8.23□□□□□ -1.09
BCAR4-205ENST00000574028 RNF216Q9NWF9 866 aaPredicted RBP8.16□□□□□ -1.1
BCAR4-205ENST00000574028 BICRAQ9NZM4 1560 aa8.16□□□□□ -1.1
BCAR4-205ENST00000574028 SLC4A1APQ9BWU0 796 aaKnown RBP8.15□□□□□ -1.1
BCAR4-205ENST00000574028 HOXD11P31277 338 aaPredicted RBP8.1□□□□□ -1.11
BCAR4-205ENST00000574028 EHMT2Q96KQ7 1210 aa8.07□□□□□ -1.12
BCAR4-205ENST00000574028 DNAJC5BQ9UF47 199 aa8.04□□□□□ -1.12
BCAR4-205ENST00000574028 DCAF8L1A6NGE4 600 aa7.99□□□□□ -1.13
BCAR4-205ENST00000574028 CECR2Q9BXF3 1484 aa7.97□□□□□ -1.13
BCAR4-205ENST00000574028 EIF4G1Q04637 1599 aaKnown RBP7.96□□□□□ -1.14
BCAR4-205ENST00000574028 CC2D2AQ9P2K1 1620 aa7.95□□□□□ -1.14
BCAR4-205ENST00000574028 POTEDQ86YR6 584 aa7.9□□□□□ -1.14
BCAR4-205ENST00000574028 SUPT5HO00267 1087 aaKnown RBP7.88□□□□□ -1.15
BCAR4-205ENST00000574028 SMARCA4P51532 1647 aa7.88□□□□□ -1.15
BCAR4-205ENST00000574028 MROH2BQ7Z745 1585 aa7.88□□□□□ -1.15
BCAR4-205ENST00000574028 WIZO95785 1651 aa7.86□□□□□ -1.15
BCAR4-205ENST00000574028 ZBTB22O15209 634 aa7.86□□□□□ -1.15
BCAR4-205ENST00000574028 CSRNP3Q8WYN3 585 aa7.86□□□□□ -1.15
BCAR4-205ENST00000574028 BAZ1AQ9NRL2 1556 aaPredicted RBP7.85□□□□□ -1.15
BCAR4-205ENST00000574028 SLC4A2P04920 1241 aa7.82□□□□□ -1.16
BCAR4-205ENST00000574028 FOXD4L1Q9NU39 408 aa7.82□□□□□ -1.16
BCAR4-205ENST00000574028 ATAD2BQ9ULI0 1458 aa7.8□□□□□ -1.16
BCAR4-205ENST00000574028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.78□□□□□ -1.16
BCAR4-205ENST00000574028 RSF1Q96T23 1441 aaPredicted RBP7.78□□□□□ -1.16
BCAR4-205ENST00000574028 BAZ1BQ9UIG0 1483 aaKnown RBP7.77□□□□□ -1.17
BCAR4-205ENST00000574028 SMARCA2P51531 1590 aa7.76□□□□□ -1.17
BCAR4-205ENST00000574028 NCAPD3P42695 1498 aa7.72□□□□□ -1.17
BCAR4-205ENST00000574028 PEG3Q9GZU2 1588 aa7.68□□□□□ -1.18
BCAR4-205ENST00000574028 HMGXB3Q12766 1538 aa7.68□□□□□ -1.18
BCAR4-205ENST00000574028 MYCNP04198 464 aaPredicted RBP7.67□□□□□ -1.18
BCAR4-205ENST00000574028 TOP2AP11388 1531 aaKnown RBP7.67□□□□□ -1.18
BCAR4-205ENST00000574028 NESP48681 1621 aa7.67□□□□□ -1.18
BCAR4-205ENST00000574028 U3KPZ7 1027 aaPredicted RBP7.65□□□□□ -1.18
BCAR4-205ENST00000574028 CCDC88BA6NC98 1476 aa7.63□□□□□ -1.19
BCAR4-205ENST00000574028 ERCC6Q03468 1493 aa7.6□□□□□ -1.19
BCAR4-205ENST00000574028 KIF21AQ7Z4S6 1674 aa7.59□□□□□ -1.19
BCAR4-205ENST00000574028 CADPSQ9ULU8 1353 aa7.56□□□□□ -1.2
BCAR4-205ENST00000574028 LAMC3Q9Y6N6 1575 aa7.54□□□□□ -1.2
BCAR4-205ENST00000574028 RNF39Q9H2S5 420 aa7.54□□□□□ -1.2
BCAR4-205ENST00000574028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.53□□□□□ -1.2
BCAR4-205ENST00000574028 HNRNPUL2Q1KMD3 747 aaKnown RBP7.53□□□□□ -1.2
BCAR4-205ENST00000574028 PRDM2Q13029 1718 aa7.52□□□□□ -1.2
BCAR4-205ENST00000574028 SAMD1Q6SPF0 538 aaPredicted RBP7.52□□□□□ -1.21
BCAR4-205ENST00000574028 PDS5BQ9NTI5 1447 aa7.51□□□□□ -1.21
BCAR4-205ENST00000574028 FANCD2Q9BXW9 1451 aa7.5□□□□□ -1.21
BCAR4-205ENST00000574028 CFTRP13569 1480 aa7.49□□□□□ -1.21
BCAR4-205ENST00000574028 CEP164Q9UPV0 1460 aa7.49□□□□□ -1.21
BCAR4-205ENST00000574028 ATXN8OSP0DMR3 200 aa7.48□□□□□ -1.21
BCAR4-205ENST00000574028 ATF5Q9Y2D1 282 aaPredicted RBP7.48□□□□□ -1.21
BCAR4-205ENST00000574028 ABCC8Q09428 1581 aa7.46□□□□□ -1.22
BCAR4-205ENST00000574028 APLP2Q06481 763 aa7.45□□□□□ -1.22
BCAR4-205ENST00000574028 C1QBPQ07021 282 aaKnown RBP7.44□□□□□ -1.22
BCAR4-205ENST00000574028 THOC2Q8NI27 1593 aaKnown RBP7.44□□□□□ -1.22
BCAR4-205ENST00000574028 MRC2Q9UBG0 1479 aa7.43□□□□□ -1.22
BCAR4-205ENST00000574028 SPINK5Q9NQ38 1064 aaPredicted RBP7.43□□□□□ -1.22
BCAR4-205ENST00000574028 URB2Q14146 1524 aaKnown RBP7.42□□□□□ -1.22
BCAR4-205ENST00000574028 CAPN15O75808 1086 aa7.41□□□□□ -1.22
BCAR4-205ENST00000574028 TRHP20396 242 aaPredicted RBP7.4□□□□□ -1.22
BCAR4-205ENST00000574028 TOPBP1Q92547 1522 aa7.38□□□□□ -1.23
BCAR4-205ENST00000574028 CUX1P39880 1505 aa7.37□□□□□ -1.23
BCAR4-205ENST00000574028 DNMBPQ6XZF7 1577 aa7.37□□□□□ -1.23
BCAR4-205ENST00000574028 WDR62O43379 1518 aa7.37□□□□□ -1.23
BCAR4-205ENST00000574028 RAD54L2Q9Y4B4 1467 aa7.36□□□□□ -1.23
BCAR4-205ENST00000574028 TRIM41Q8WV44 630 aa7.36□□□□□ -1.23
BCAR4-205ENST00000574028 SYNJ1O43426 1573 aa7.36□□□□□ -1.23
BCAR4-205ENST00000574028 WRNQ14191 1432 aaPredicted RBP eCLIP7.35□□□□□ -1.23
BCAR4-205ENST00000574028 ZNF219Q9P2Y4 722 aaPredicted RBP7.35□□□□□ -1.23
BCAR4-205ENST00000574028 CUX2O14529 1486 aa7.35□□□□□ -1.23
BCAR4-205ENST00000574028 FGD5Q6ZNL6 1462 aa7.35□□□□□ -1.23
BCAR4-205ENST00000574028 CACNB1Q02641 598 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms