RNA–Protein interactions for RNA: ENST00000572426.5

ZZEF1-204, Transcript of zinc finger ZZ-type and EF-hand domain containing 1, humanhuman

TSL 2

Gene ZZEF1, Length 3,226 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZZEF1-204ENST00000572426 NISCHQ9Y2I1 1504 aa19.87■□□□□ 0.77
ZZEF1-204ENST00000572426 SHROOM4Q9ULL8 1493 aa17.9■□□□□ 0.46
ZZEF1-204ENST00000572426 SUPT5HO00267 1087 aaKnown RBP17.6■□□□□ 0.41
ZZEF1-204ENST00000572426 DCAF8L2P0C7V8 631 aa17.49■□□□□ 0.39
ZZEF1-204ENST00000572426 CHIC1Q5VXU3 224 aa16.76■□□□□ 0.27
ZZEF1-204ENST00000572426 ZCCHC6Q5VYS8 1495 aaKnown RBP16.76■□□□□ 0.27
ZZEF1-204ENST00000572426 MYO15BQ96JP2 1530 aa16.73■□□□□ 0.27
ZZEF1-204ENST00000572426 PCGF6Q9BYE7 350 aa16.7■□□□□ 0.26
ZZEF1-204ENST00000572426 EHMT2Q96KQ7 1210 aa16.6■□□□□ 0.25
ZZEF1-204ENST00000572426 LOC105371045A0A1W2PR82 267 aa16.6■□□□□ 0.25
ZZEF1-204ENST00000572426 PPARGC1BQ86YN6 1023 aaKnown RBP16.51■□□□□ 0.23
ZZEF1-204ENST00000572426 CCDC180Q9P1Z9 1646 aa16.48■□□□□ 0.23
ZZEF1-204ENST00000572426 HRCP23327 699 aa16.43■□□□□ 0.22
ZZEF1-204ENST00000572426 FAM9AQ8IZU1 332 aaPredicted RBP16.41■□□□□ 0.22
ZZEF1-204ENST00000572426 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
ZZEF1-204ENST00000572426 SCRIBQ14160 1630 aa16.1■□□□□ 0.17
ZZEF1-204ENST00000572426 TTBK1Q5TCY1 1321 aaPredicted RBP16.03■□□□□ 0.16
ZZEF1-204ENST00000572426 ABCC9O60706 1549 aa15.99■□□□□ 0.15
ZZEF1-204ENST00000572426 TRIM26Q12899 539 aaPredicted RBP15.98■□□□□ 0.15
ZZEF1-204ENST00000572426 RSF1Q96T23 1441 aaPredicted RBP15.92■□□□□ 0.14
ZZEF1-204ENST00000572426 DCAF1Q9Y4B6 1507 aa15.9■□□□□ 0.14
ZZEF1-204ENST00000572426 RB1CC1Q8TDY2 1594 aa15.84■□□□□ 0.13
ZZEF1-204ENST00000572426 CECR2Q9BXF3 1484 aa15.79■□□□□ 0.12
ZZEF1-204ENST00000572426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
ZZEF1-204ENST00000572426 MROH2BQ7Z745 1585 aa15.63■□□□□ 0.09
ZZEF1-204ENST00000572426 RANGAP1P46060 587 aaPredicted RBP15.59■□□□□ 0.09
ZZEF1-204ENST00000572426 CCER1Q8TC90 406 aaPredicted RBP15.58■□□□□ 0.08
ZZEF1-204ENST00000572426 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
ZZEF1-204ENST00000572426 WIZO95785 1651 aa15.56■□□□□ 0.08
ZZEF1-204ENST00000572426 ZEB1P37275 1124 aaPredicted RBP15.52■□□□□ 0.07
ZZEF1-204ENST00000572426 UBTFP17480 764 aaKnown RBP15.48■□□□□ 0.07
ZZEF1-204ENST00000572426 ABCC8Q09428 1581 aa15.42■□□□□ 0.06
ZZEF1-204ENST00000572426 NACADO15069 1562 aa15.37■□□□□ 0.05
ZZEF1-204ENST00000572426 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
ZZEF1-204ENST00000572426 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
ZZEF1-204ENST00000572426 SOGA1O94964 1423 aa15.32■□□□□ 0.04
ZZEF1-204ENST00000572426 HNRNPUL2Q1KMD3 747 aaKnown RBP15.32■□□□□ 0.04
ZZEF1-204ENST00000572426 YTHDC1Q96MU7 727 aaKnown RBP15.28■□□□□ 0.04
ZZEF1-204ENST00000572426 RUSC2Q8N2Y8 1516 aa15.26■□□□□ 0.03
ZZEF1-204ENST00000572426 DIEXFQ68CQ4 756 aaKnown RBP15.22■□□□□ 0.03
ZZEF1-204ENST00000572426 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
ZZEF1-204ENST00000572426 CEP162Q5TB80 1403 aa15.22■□□□□ 0.03
ZZEF1-204ENST00000572426 BAZ1AQ9NRL2 1556 aaPredicted RBP15.21■□□□□ 0.03
ZZEF1-204ENST00000572426 NEUROD1Q13562 356 aa15.2■□□□□ 0.02
ZZEF1-204ENST00000572426 TOP2AP11388 1531 aaKnown RBP15.1■□□□□ 0.01
ZZEF1-204ENST00000572426 GTF3C3Q9Y5Q9 886 aa15.09■□□□□ 0.01
ZZEF1-204ENST00000572426 SMARCA4P51532 1647 aa15.09■□□□□ 0.01
ZZEF1-204ENST00000572426 APLP2Q06481 763 aa15.09■□□□□ 0.01
ZZEF1-204ENST00000572426 SMARCA2P51531 1590 aa15.08■□□□□ 0.01
ZZEF1-204ENST00000572426 ACIN1Q9UKV3 1341 aaKnown RBP15.07■□□□□ 0
ZZEF1-204ENST00000572426 EIF4G1Q04637 1599 aaKnown RBP15.04■□□□□ -0
ZZEF1-204ENST00000572426 ITGAEP38570 1179 aa15.02■□□□□ -0
ZZEF1-204ENST00000572426 TNIKQ9UKE5 1360 aa15.01□□□□□ -0.01
ZZEF1-204ENST00000572426 WRNQ14191 1432 aaPredicted RBP eCLIP15.01□□□□□ -0.01
ZZEF1-204ENST00000572426 CENPBP07199 599 aaPredicted RBP14.99□□□□□ -0.01
ZZEF1-204ENST00000572426 ZNF316A6NFI3 1004 aaPredicted RBP14.96□□□□□ -0.01
ZZEF1-204ENST00000572426 UNC13AQ9UPW8 1703 aa14.95□□□□□ -0.02
ZZEF1-204ENST00000572426 GOLGA3Q08378 1498 aa14.94□□□□□ -0.02
ZZEF1-204ENST00000572426 CLIP1P30622 1438 aa14.93□□□□□ -0.02
ZZEF1-204ENST00000572426 MIER1Q8N108 512 aa14.93□□□□□ -0.02
ZZEF1-204ENST00000572426 SYNJ1O43426 1573 aa14.87□□□□□ -0.03
ZZEF1-204ENST00000572426 RAPGEF2Q9Y4G8 1499 aa14.87□□□□□ -0.03
ZZEF1-204ENST00000572426 ATP1B4Q9UN42 357 aaPredicted RBP14.86□□□□□ -0.03
ZZEF1-204ENST00000572426 BAZ1BQ9UIG0 1483 aaKnown RBP14.84□□□□□ -0.03
ZZEF1-204ENST00000572426 EEA1Q15075 1411 aa14.82□□□□□ -0.04
ZZEF1-204ENST00000572426 BICRAQ9NZM4 1560 aa14.81□□□□□ -0.04
ZZEF1-204ENST00000572426 CEP164Q9UPV0 1460 aa14.81□□□□□ -0.04
ZZEF1-204ENST00000572426 KANK4Q5T7N3 995 aaPredicted RBP14.81□□□□□ -0.04
ZZEF1-204ENST00000572426 ATAD2BQ9ULI0 1458 aa14.77□□□□□ -0.04
ZZEF1-204ENST00000572426 P3H3Q8IVL6 736 aa14.77□□□□□ -0.04
ZZEF1-204ENST00000572426 PELP1Q8IZL8 1130 aaKnown RBP14.77□□□□□ -0.04
ZZEF1-204ENST00000572426 VPS8Q8N3P4 1428 aa14.74□□□□□ -0.05
ZZEF1-204ENST00000572426 KIF21BO75037 1637 aa14.65□□□□□ -0.06
ZZEF1-204ENST00000572426 FAM50AQ14320 339 aaKnown RBP14.64□□□□□ -0.07
ZZEF1-204ENST00000572426 HIRIP3Q9BW71 556 aaPredicted RBP14.64□□□□□ -0.07
ZZEF1-204ENST00000572426 KCNH8Q96L42 1107 aa14.57□□□□□ -0.08
ZZEF1-204ENST00000572426 DHX57Q6P158 1386 aaKnown RBP14.56□□□□□ -0.08
ZZEF1-204ENST00000572426 ARAP1Q96P48 1450 aa14.56□□□□□ -0.08
ZZEF1-204ENST00000572426 BCANQ96GW7 911 aa14.56□□□□□ -0.08
ZZEF1-204ENST00000572426 SIN3AQ96ST3 1273 aa14.53□□□□□ -0.08
ZZEF1-204ENST00000572426 PEG3Q9GZU2 1588 aa14.5□□□□□ -0.09
ZZEF1-204ENST00000572426 KIF27Q86VH2 1401 aa14.5□□□□□ -0.09
ZZEF1-204ENST00000572426 CUX1P39880 1505 aa14.49□□□□□ -0.09
ZZEF1-204ENST00000572426 TOP2BQ02880 1626 aa14.49□□□□□ -0.09
ZZEF1-204ENST00000572426 CUX2O14529 1486 aa14.48□□□□□ -0.09
ZZEF1-204ENST00000572426 ARID3CA6NKF2 412 aa14.48□□□□□ -0.09
ZZEF1-204ENST00000572426 DDX10Q13206 875 aaKnown RBP14.47□□□□□ -0.09
ZZEF1-204ENST00000572426 CCNB3Q8WWL7 1395 aa14.46□□□□□ -0.09
ZZEF1-204ENST00000572426 PRXQ9BXM0 1461 aa14.45□□□□□ -0.1
ZZEF1-204ENST00000572426 RAB3GAP2Q9H2M9 1393 aa14.42□□□□□ -0.1
ZZEF1-204ENST00000572426 ARHGAP35Q9NRY4 1499 aa14.41□□□□□ -0.1
ZZEF1-204ENST00000572426 SUPT16HQ9Y5B9 1047 aaKnown RBP14.37□□□□□ -0.11
ZZEF1-204ENST00000572426 CARMIL1Q5VZK9 1371 aa14.37□□□□□ -0.11
ZZEF1-204ENST00000572426 CNGB1Q14028 1251 aaPredicted RBP14.37□□□□□ -0.11
ZZEF1-204ENST00000572426 TRIM52Q96A61 297 aa14.36□□□□□ -0.11
ZZEF1-204ENST00000572426 IGF1RP08069 1367 aa14.36□□□□□ -0.11
ZZEF1-204ENST00000572426 FHOD3Q2V2M9 1422 aa14.34□□□□□ -0.11
ZZEF1-204ENST00000572426 PHLDB1Q86UU1 1377 aa14.34□□□□□ -0.11
ZZEF1-204ENST00000572426 BIVM-ERCC5R4GMW8 1640 aa14.32□□□□□ -0.12
ZZEF1-204ENST00000572426 NCAPD3P42695 1498 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms