RNA–Protein interactions for RNA: ENST00000571436.5

ZZEF1-203, Transcript of zinc finger ZZ-type and EF-hand domain containing 1, humanhuman

TSL 1 (best)

Gene ZZEF1, Length 2,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZZEF1-203ENST00000571436 NISCHQ9Y2I1 1504 aa23.51■■□□□ 1.35
ZZEF1-203ENST00000571436 CCDC180Q9P1Z9 1646 aa20.29■□□□□ 0.84
ZZEF1-203ENST00000571436 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.84
ZZEF1-203ENST00000571436 SHROOM4Q9ULL8 1493 aa19.94■□□□□ 0.78
ZZEF1-203ENST00000571436 ZCCHC6Q5VYS8 1495 aaKnown RBP19.8■□□□□ 0.76
ZZEF1-203ENST00000571436 MYT1Q01538 1121 aa19.75■□□□□ 0.75
ZZEF1-203ENST00000571436 DCAF8L2P0C7V8 631 aa19.7■□□□□ 0.74
ZZEF1-203ENST00000571436 HRCP23327 699 aa19.66■□□□□ 0.74
ZZEF1-203ENST00000571436 SUPT5HO00267 1087 aaKnown RBP19.43■□□□□ 0.7
ZZEF1-203ENST00000571436 DCAF1Q9Y4B6 1507 aa19.34■□□□□ 0.69
ZZEF1-203ENST00000571436 PPARGC1BQ86YN6 1023 aaKnown RBP19.22■□□□□ 0.67
ZZEF1-203ENST00000571436 ABCC9O60706 1549 aa19.09■□□□□ 0.65
ZZEF1-203ENST00000571436 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
ZZEF1-203ENST00000571436 MYO15BQ96JP2 1530 aa18.97■□□□□ 0.63
ZZEF1-203ENST00000571436 PCGF6Q9BYE7 350 aa18.87■□□□□ 0.61
ZZEF1-203ENST00000571436 SCRIBQ14160 1630 aa18.85■□□□□ 0.61
ZZEF1-203ENST00000571436 NACADO15069 1562 aa18.84■□□□□ 0.61
ZZEF1-203ENST00000571436 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
ZZEF1-203ENST00000571436 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
ZZEF1-203ENST00000571436 RB1CC1Q8TDY2 1594 aa18.63■□□□□ 0.57
ZZEF1-203ENST00000571436 RSF1Q96T23 1441 aaPredicted RBP18.47■□□□□ 0.55
ZZEF1-203ENST00000571436 CECR2Q9BXF3 1484 aa18.36■□□□□ 0.53
ZZEF1-203ENST00000571436 ACIN1Q9UKV3 1341 aaKnown RBP18.35■□□□□ 0.53
ZZEF1-203ENST00000571436 BCL11AQ9H165 835 aa18.35■□□□□ 0.53
ZZEF1-203ENST00000571436 UNC13AQ9UPW8 1703 aa18.33■□□□□ 0.52
ZZEF1-203ENST00000571436 PRKCSHP14314 528 aaPredicted RBP18.28■□□□□ 0.52
ZZEF1-203ENST00000571436 GTF3C3Q9Y5Q9 886 aa18.26■□□□□ 0.51
ZZEF1-203ENST00000571436 NEUROD1Q13562 356 aa18.25■□□□□ 0.51
ZZEF1-203ENST00000571436 MROH2BQ7Z745 1585 aa18.24■□□□□ 0.51
ZZEF1-203ENST00000571436 LOC105371045A0A1W2PR82 267 aa18.18■□□□□ 0.5
ZZEF1-203ENST00000571436 CENPBP07199 599 aaPredicted RBP18.18■□□□□ 0.5
ZZEF1-203ENST00000571436 ZEB1P37275 1124 aaPredicted RBP18.18■□□□□ 0.5
ZZEF1-203ENST00000571436 FAM9AQ8IZU1 332 aaPredicted RBP18.16■□□□□ 0.5
ZZEF1-203ENST00000571436 WIZO95785 1651 aa18.12■□□□□ 0.49
ZZEF1-203ENST00000571436 BAZ1AQ9NRL2 1556 aaPredicted RBP18.11■□□□□ 0.49
ZZEF1-203ENST00000571436 PABPN1Q86U42 306 aaKnown RBP eCLIP18.11■□□□□ 0.49
ZZEF1-203ENST00000571436 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
ZZEF1-203ENST00000571436 TRIM41Q8WV44 630 aa18.06■□□□□ 0.48
ZZEF1-203ENST00000571436 TRIM26Q12899 539 aaPredicted RBP18.03■□□□□ 0.48
ZZEF1-203ENST00000571436 SMARCA4P51532 1647 aa18.02■□□□□ 0.47
ZZEF1-203ENST00000571436 EHMT2Q96KQ7 1210 aa17.9■□□□□ 0.46
ZZEF1-203ENST00000571436 ERICH6Q7L0X2 663 aa17.88■□□□□ 0.45
ZZEF1-203ENST00000571436 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
ZZEF1-203ENST00000571436 ANP32EQ9BTT0 268 aa17.79■□□□□ 0.44
ZZEF1-203ENST00000571436 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
ZZEF1-203ENST00000571436 SMARCA2P51531 1590 aa17.73■□□□□ 0.43
ZZEF1-203ENST00000571436 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
ZZEF1-203ENST00000571436 EIF4G1Q04637 1599 aaKnown RBP17.69■□□□□ 0.42
ZZEF1-203ENST00000571436 APLP2Q06481 763 aa17.68■□□□□ 0.42
ZZEF1-203ENST00000571436 ATAD2BQ9ULI0 1458 aa17.65■□□□□ 0.42
ZZEF1-203ENST00000571436 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
ZZEF1-203ENST00000571436 CSRNP3Q8WYN3 585 aa17.62■□□□□ 0.41
ZZEF1-203ENST00000571436 DIEXFQ68CQ4 756 aaKnown RBP17.6■□□□□ 0.41
ZZEF1-203ENST00000571436 BAZ1BQ9UIG0 1483 aaKnown RBP17.59■□□□□ 0.41
ZZEF1-203ENST00000571436 YTHDC1Q96MU7 727 aaKnown RBP17.45■□□□□ 0.38
ZZEF1-203ENST00000571436 SOGA1O94964 1423 aa17.44■□□□□ 0.38
ZZEF1-203ENST00000571436 NCAPD3P42695 1498 aa17.4■□□□□ 0.38
ZZEF1-203ENST00000571436 HMGXB3Q12766 1538 aa17.39■□□□□ 0.37
ZZEF1-203ENST00000571436 RUSC2Q8N2Y8 1516 aa17.38■□□□□ 0.37
ZZEF1-203ENST00000571436 WRNQ14191 1432 aaPredicted RBP eCLIP17.36■□□□□ 0.37
ZZEF1-203ENST00000571436 TSHZ2Q9NRE2 1034 aa17.31■□□□□ 0.36
ZZEF1-203ENST00000571436 UBTFP17480 764 aaKnown RBP17.27■□□□□ 0.36
ZZEF1-203ENST00000571436 SYNJ1O43426 1573 aa17.27■□□□□ 0.36
ZZEF1-203ENST00000571436 CC2D2AQ9P2K1 1620 aa17.22■□□□□ 0.35
ZZEF1-203ENST00000571436 CCER1Q8TC90 406 aaPredicted RBP17.2■□□□□ 0.34
ZZEF1-203ENST00000571436 CEP162Q5TB80 1403 aa17.2■□□□□ 0.34
ZZEF1-203ENST00000571436 EEA1Q15075 1411 aa17.19■□□□□ 0.34
ZZEF1-203ENST00000571436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
ZZEF1-203ENST00000571436 SUPT16HQ9Y5B9 1047 aaKnown RBP17.17■□□□□ 0.34
ZZEF1-203ENST00000571436 TNIKQ9UKE5 1360 aa17.16■□□□□ 0.34
ZZEF1-203ENST00000571436 CFTRP13569 1480 aa17.13■□□□□ 0.33
ZZEF1-203ENST00000571436 GOLGA3Q08378 1498 aa17.12■□□□□ 0.33
ZZEF1-203ENST00000571436 CLSPNQ9HAW4 1339 aa17.11■□□□□ 0.33
ZZEF1-203ENST00000571436 ANO8Q9HCE9 1232 aaPredicted RBP17.11■□□□□ 0.33
ZZEF1-203ENST00000571436 RANGAP1P46060 587 aaPredicted RBP17.09■□□□□ 0.33
ZZEF1-203ENST00000571436 TOP2BQ02880 1626 aa17.09■□□□□ 0.33
ZZEF1-203ENST00000571436 BIVM-ERCC5R4GMW8 1640 aa17.05■□□□□ 0.32
ZZEF1-203ENST00000571436 ZNF316A6NFI3 1004 aaPredicted RBP17.04■□□□□ 0.32
ZZEF1-203ENST00000571436 MIER1Q8N108 512 aa17.04■□□□□ 0.32
ZZEF1-203ENST00000571436 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
ZZEF1-203ENST00000571436 PRDM2Q13029 1718 aa17.02■□□□□ 0.32
ZZEF1-203ENST00000571436 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
ZZEF1-203ENST00000571436 CUX1P39880 1505 aa17.01■□□□□ 0.31
ZZEF1-203ENST00000571436 RAPGEF2Q9Y4G8 1499 aa17.01■□□□□ 0.31
ZZEF1-203ENST00000571436 KIF21BO75037 1637 aa16.97■□□□□ 0.31
ZZEF1-203ENST00000571436 CLIP1P30622 1438 aa16.94■□□□□ 0.3
ZZEF1-203ENST00000571436 UBE2Q2Q8WVN8 375 aa16.87■□□□□ 0.29
ZZEF1-203ENST00000571436 NESP48681 1621 aa16.86■□□□□ 0.29
ZZEF1-203ENST00000571436 FANCD2Q9BXW9 1451 aa16.86■□□□□ 0.29
ZZEF1-203ENST00000571436 KIF27Q86VH2 1401 aa16.84■□□□□ 0.29
ZZEF1-203ENST00000571436 RBM19Q9Y4C8 960 aaKnown RBP16.83■□□□□ 0.29
ZZEF1-203ENST00000571436 PRXQ9BXM0 1461 aa16.83■□□□□ 0.28
ZZEF1-203ENST00000571436 SALL2Q9Y467 1007 aaPredicted RBP16.83■□□□□ 0.28
ZZEF1-203ENST00000571436 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
ZZEF1-203ENST00000571436 VPS8Q8N3P4 1428 aa16.8■□□□□ 0.28
ZZEF1-203ENST00000571436 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
ZZEF1-203ENST00000571436 CCDC136Q96JN2 1154 aa16.77■□□□□ 0.27
ZZEF1-203ENST00000571436 CUX2O14529 1486 aa16.76■□□□□ 0.27
ZZEF1-203ENST00000571436 LAMC3Q9Y6N6 1575 aa16.76■□□□□ 0.27
ZZEF1-203ENST00000571436 MSH5O43196 834 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 203.3 ms