RNA–Protein interactions for RNA: ENST00000570174.1

LONP2-209, Transcript of lon peptidase 2, peroxisomal, human

TSL 5

Gene LONP2, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LONP2-209	ENST00000570174	AEBP2	Q6ZN18	517 aa	Predicted RBP	17.49	■□□□□ 0.39
LONP2-209	ENST00000570174	CHIC1	Q5VXU3	224 aa		17.46	■□□□□ 0.39
LONP2-209	ENST00000570174	NISCH	Q9Y2I1	1504 aa		15.48	■□□□□ 0.07
LONP2-209	ENST00000570174	PHF23	Q9BUL5	403 aa	Predicted RBP	15.34	■□□□□ 0.05
LONP2-209	ENST00000570174	SENP3	Q9H4L4	574 aa	Predicted RBP	14.86	□□□□□ -0.03
LONP2-209	ENST00000570174	PLPPR3	Q6T4P5	718 aa		14.33	□□□□□ -0.12
LONP2-209	ENST00000570174	ABCC9	O60706	1549 aa		13.7	□□□□□ -0.22
LONP2-209	ENST00000570174	CCDC180	Q9P1Z9	1646 aa		13.7	□□□□□ -0.22
LONP2-209	ENST00000570174	FOXD1	Q16676	465 aa		13.69	□□□□□ -0.22
LONP2-209	ENST00000570174	PPP6R1	Q9UPN7	881 aa		13.39	□□□□□ -0.27
LONP2-209	ENST00000570174	ADRA2B	P18089	450 aa		13.38	□□□□□ -0.27
LONP2-209	ENST00000570174	DCAF8L2	P0C7V8	631 aa		13.17	□□□□□ -0.3
LONP2-209	ENST00000570174	RB1CC1	Q8TDY2	1594 aa		13.1	□□□□□ -0.31
LONP2-209	ENST00000570174	NACAD	O15069	1562 aa		13.07	□□□□□ -0.32
LONP2-209	ENST00000570174	MYO15B	Q96JP2	1530 aa		12.99	□□□□□ -0.33
LONP2-209	ENST00000570174	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.98	□□□□□ -0.33
LONP2-209	ENST00000570174	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
LONP2-209	ENST00000570174	DCAF1	Q9Y4B6	1507 aa		12.83	□□□□□ -0.35
LONP2-209	ENST00000570174	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.82	□□□□□ -0.36
LONP2-209	ENST00000570174	DNAJC5B	Q9UF47	199 aa		12.8	□□□□□ -0.36
LONP2-209	ENST00000570174	KCNA4	P22459	653 aa		12.66	□□□□□ -0.38
LONP2-209	ENST00000570174	SHROOM4	Q9ULL8	1493 aa		12.65	□□□□□ -0.38
LONP2-209	ENST00000570174	PPP4R3CP	Q6ZMV5	832 aa		12.63	□□□□□ -0.39
LONP2-209	ENST00000570174	BICRA	Q9NZM4	1560 aa		12.6	□□□□□ -0.39
LONP2-209	ENST00000570174	MSH5	O43196	834 aa		12.57	□□□□□ -0.4
LONP2-209	ENST00000570174	SCRIB	Q14160	1630 aa		12.48	□□□□□ -0.41
LONP2-209	ENST00000570174	UNC13A	Q9UPW8	1703 aa		12.46	□□□□□ -0.41
LONP2-209	ENST00000570174	NCBP3	Q53F19	620 aa	Known RBP	12.43	□□□□□ -0.42
LONP2-209	ENST00000570174	CECR2	Q9BXF3	1484 aa		12.38	□□□□□ -0.43
LONP2-209	ENST00000570174	EIF4G1	Q04637	1599 aa	Known RBP	12.35	□□□□□ -0.43
LONP2-209	ENST00000570174	SCAF1	Q9H7N4	1312 aa	Known RBP	12.35	□□□□□ -0.43
LONP2-209	ENST00000570174	CC2D2A	Q9P2K1	1620 aa		12.31	□□□□□ -0.44
LONP2-209	ENST00000570174	CNKSR2	Q8WXI2	1034 aa		12.24	□□□□□ -0.45
LONP2-209	ENST00000570174	NPM3	O75607	178 aa	Known RBP	12.22	□□□□□ -0.45
LONP2-209	ENST00000570174	SLC4A1AP	Q9BWU0	796 aa	Known RBP	12.14	□□□□□ -0.47
LONP2-209	ENST00000570174	NCAPD3	P42695	1498 aa		12.14	□□□□□ -0.47
LONP2-209	ENST00000570174	EHMT2	Q96KQ7	1210 aa		12.09	□□□□□ -0.47
LONP2-209	ENST00000570174	ATAD2B	Q9ULI0	1458 aa		12.06	□□□□□ -0.48
LONP2-209	ENST00000570174	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.03	□□□□□ -0.48
LONP2-209	ENST00000570174	POTED	Q86YR6	584 aa		12.03	□□□□□ -0.48
LONP2-209	ENST00000570174	SMARCA2	P51531	1590 aa		12.01	□□□□□ -0.49
LONP2-209	ENST00000570174	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	12.01	□□□□□ -0.49
LONP2-209	ENST00000570174	SMARCA4	P51532	1647 aa		11.95	□□□□□ -0.5
LONP2-209	ENST00000570174	HMGXB3	Q12766	1538 aa		11.95	□□□□□ -0.5
LONP2-209	ENST00000570174	RNF216	Q9NWF9	866 aa	Predicted RBP	11.94	□□□□□ -0.5
LONP2-209	ENST00000570174	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.94	□□□□□ -0.5
LONP2-209	ENST00000570174	DMRT2	Q9Y5R5	561 aa		11.91	□□□□□ -0.5
LONP2-209	ENST00000570174	PEG3	Q9GZU2	1588 aa		11.89	□□□□□ -0.51
LONP2-209	ENST00000570174	ERCC6	Q03468	1493 aa		11.89	□□□□□ -0.51
LONP2-209	ENST00000570174	CSRNP3	Q8WYN3	585 aa		11.87	□□□□□ -0.51
LONP2-209	ENST00000570174	MROH2B	Q7Z745	1585 aa		11.87	□□□□□ -0.51
LONP2-209	ENST00000570174	CUX2	O14529	1486 aa		11.83	□□□□□ -0.52
LONP2-209	ENST00000570174	PDS5B	Q9NTI5	1447 aa		11.81	□□□□□ -0.52
LONP2-209	ENST00000570174	HOXD11	P31277	338 aa	Predicted RBP	11.81	□□□□□ -0.52
LONP2-209	ENST00000570174	CADPS	Q9ULU8	1353 aa		11.8	□□□□□ -0.52
LONP2-209	ENST00000570174	DNAJC5	Q9H3Z4	198 aa		11.79	□□□□□ -0.52
LONP2-209	ENST00000570174	RSF1	Q96T23	1441 aa	Predicted RBP	11.76	□□□□□ -0.53
LONP2-209	ENST00000570174	NES	P48681	1621 aa		11.75	□□□□□ -0.53
LONP2-209	ENST00000570174	LAMC3	Q9Y6N6	1575 aa		11.74	□□□□□ -0.53
LONP2-209	ENST00000570174	ZBTB22	O15209	634 aa		11.66	□□□□□ -0.54
LONP2-209	ENST00000570174	WIZ	O95785	1651 aa		11.64	□□□□□ -0.55
LONP2-209	ENST00000570174	CFTR	P13569	1480 aa		11.63	□□□□□ -0.55
LONP2-209	ENST00000570174	FOXD4L1	Q9NU39	408 aa		11.63	□□□□□ -0.55
LONP2-209	ENST00000570174	TOP2A	P11388	1531 aa	Known RBP	11.6	□□□□□ -0.55
LONP2-209	ENST00000570174	MRC2	Q9UBG0	1479 aa		11.6	□□□□□ -0.55
LONP2-209	ENST00000570174	FANCD2	Q9BXW9	1451 aa		11.58	□□□□□ -0.56
LONP2-209	ENST00000570174	CEP164	Q9UPV0	1460 aa		11.57	□□□□□ -0.56
LONP2-209	ENST00000570174	THOC2	Q8NI27	1593 aa	Known RBP	11.54	□□□□□ -0.56
LONP2-209	ENST00000570174	CCDC88B	A6NC98	1476 aa		11.52	□□□□□ -0.56
LONP2-209	ENST00000570174	WDR62	O43379	1518 aa		11.51	□□□□□ -0.57
LONP2-209	ENST00000570174	SLC4A2	P04920	1241 aa		11.45	□□□□□ -0.58
LONP2-209	ENST00000570174	OSCAR	Q8IYS5	282 aa		11.45	□□□□□ -0.58
LONP2-209	ENST00000570174	ABCC8	Q09428	1581 aa		11.45	□□□□□ -0.58
LONP2-209	ENST00000570174	KIF21A	Q7Z4S6	1674 aa		11.43	□□□□□ -0.58
LONP2-209	ENST00000570174	URB2	Q14146	1524 aa	Known RBP	11.4	□□□□□ -0.58
LONP2-209	ENST00000570174	SUPT5H	O00267	1087 aa	Known RBP	11.39	□□□□□ -0.59
LONP2-209	ENST00000570174	IFT140	Q96RY7	1462 aa		11.38	□□□□□ -0.59
LONP2-209	ENST00000570174	TOPBP1	Q92547	1522 aa		11.34	□□□□□ -0.59
LONP2-209	ENST00000570174	MYCN	P04198	464 aa	Predicted RBP	11.31	□□□□□ -0.6
LONP2-209	ENST00000570174	SOGA1	O94964	1423 aa		11.28	□□□□□ -0.6
LONP2-209	ENST00000570174	DNMBP	Q6XZF7	1577 aa		11.28	□□□□□ -0.6
LONP2-209	ENST00000570174	TRIM41	Q8WV44	630 aa		11.26	□□□□□ -0.61
LONP2-209	ENST00000570174	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.25	□□□□□ -0.61
LONP2-209	ENST00000570174	DCAF8L1	A6NGE4	600 aa		11.25	□□□□□ -0.61
LONP2-209	ENST00000570174	ATXN8OS	P0DMR3	200 aa		11.25	□□□□□ -0.61
LONP2-209	ENST00000570174	FBLN2	P98095	1184 aa		11.24	□□□□□ -0.61
LONP2-209	ENST00000570174	POLA1	P09884	1462 aa	Predicted RBP	11.24	□□□□□ -0.61
LONP2-209	ENST00000570174	AQR	O60306	1485 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
LONP2-209	ENST00000570174	TDRD9	Q8NDG6	1382 aa	Known RBP	11.22	□□□□□ -0.61
LONP2-209	ENST00000570174	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.21	□□□□□ -0.61
LONP2-209	ENST00000570174	PRDM2	Q13029	1718 aa		11.18	□□□□□ -0.62
LONP2-209	ENST00000570174	RAD54L2	Q9Y4B4	1467 aa		11.18	□□□□□ -0.62
LONP2-209	ENST00000570174	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.17	□□□□□ -0.62	4e-7	■■■□□ 15.6
LONP2-209	ENST00000570174	FGD5	Q6ZNL6	1462 aa		11.17	□□□□□ -0.62
LONP2-209	ENST00000570174	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.16	□□□□□ -0.62
LONP2-209	ENST00000570174	GRIN2B	Q13224	1484 aa		11.14	□□□□□ -0.63
LONP2-209	ENST00000570174	TARBP1	Q13395	1621 aa	Known RBP	11.14	□□□□□ -0.63
LONP2-209	ENST00000570174	CUX1	P39880	1505 aa		11.14	□□□□□ -0.63
LONP2-209	ENST00000570174	WDR97	A6NE52	1622 aa		11.13	□□□□□ -0.63
LONP2-209	ENST00000570174	CYB5RL	Q6IPT4	315 aa		11.12	□□□□□ -0.63

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