RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 NISCHQ9Y2I1 1504 aa8.01□□□□□ -1.13
LPCAT2-208ENST00000566915 AEBP2Q6ZN18 517 aaPredicted RBP7.56□□□□□ -1.2
LPCAT2-208ENST00000566915 DCAF8L2P0C7V8 631 aa7.38□□□□□ -1.23
LPCAT2-208ENST00000566915 ABCC9O60706 1549 aa7.1□□□□□ -1.27
LPCAT2-208ENST00000566915 CCDC180Q9P1Z9 1646 aa7.08□□□□□ -1.28
LPCAT2-208ENST00000566915 CHIC1Q5VXU3 224 aa7.05□□□□□ -1.28
LPCAT2-208ENST00000566915 PELP1Q8IZL8 1130 aaKnown RBP6.95□□□□□ -1.3
LPCAT2-208ENST00000566915 SUPT5HO00267 1087 aaKnown RBP6.92□□□□□ -1.3
LPCAT2-208ENST00000566915 RB1CC1Q8TDY2 1594 aa6.88□□□□□ -1.31
LPCAT2-208ENST00000566915 NACADO15069 1562 aa6.81□□□□□ -1.32
LPCAT2-208ENST00000566915 ZEB1P37275 1124 aaPredicted RBP6.8□□□□□ -1.32
LPCAT2-208ENST00000566915 MYT1Q01538 1121 aa6.78□□□□□ -1.32
LPCAT2-208ENST00000566915 SHROOM4Q9ULL8 1493 aa6.73□□□□□ -1.33
LPCAT2-208ENST00000566915 PABPN1Q86U42 306 aaKnown RBP eCLIP6.72□□□□□ -1.33
LPCAT2-208ENST00000566915 APLP2Q06481 763 aa6.71□□□□□ -1.34
LPCAT2-208ENST00000566915 CENPBP07199 599 aaPredicted RBP6.7□□□□□ -1.34
LPCAT2-208ENST00000566915 FAM9AQ8IZU1 332 aaPredicted RBP6.66□□□□□ -1.34
LPCAT2-208ENST00000566915 MYO15BQ96JP2 1530 aa6.63□□□□□ -1.35
LPCAT2-208ENST00000566915 ZCCHC6Q5VYS8 1495 aaKnown RBP6.62□□□□□ -1.35
LPCAT2-208ENST00000566915 CCER1Q8TC90 406 aaPredicted RBP6.62□□□□□ -1.35
LPCAT2-208ENST00000566915 DCAF1Q9Y4B6 1507 aa6.61□□□□□ -1.35
LPCAT2-208ENST00000566915 PCGF6Q9BYE7 350 aa6.61□□□□□ -1.35
LPCAT2-208ENST00000566915 SCRIBQ14160 1630 aa6.58□□□□□ -1.36
LPCAT2-208ENST00000566915 PHF23Q9BUL5 403 aaPredicted RBP6.56□□□□□ -1.36
LPCAT2-208ENST00000566915 TRIM41Q8WV44 630 aa6.53□□□□□ -1.36
LPCAT2-208ENST00000566915 TRIM26Q12899 539 aaPredicted RBP6.5□□□□□ -1.37
LPCAT2-208ENST00000566915 ERICH6Q7L0X2 663 aa6.5□□□□□ -1.37
LPCAT2-208ENST00000566915 HRCP23327 699 aa6.48□□□□□ -1.37
LPCAT2-208ENST00000566915 NEFLP07196 543 aa6.46□□□□□ -1.38
LPCAT2-208ENST00000566915 EHMT2Q96KQ7 1210 aa6.44□□□□□ -1.38
LPCAT2-208ENST00000566915 ERCC6Q03468 1493 aa6.43□□□□□ -1.38
LPCAT2-208ENST00000566915 CECR2Q9BXF3 1484 aa6.42□□□□□ -1.38
LPCAT2-208ENST00000566915 UBTFP17480 764 aaKnown RBP6.39□□□□□ -1.39
LPCAT2-208ENST00000566915 SMARCA2P51531 1590 aa6.38□□□□□ -1.39
LPCAT2-208ENST00000566915 BAZ1BQ9UIG0 1483 aaKnown RBP6.37□□□□□ -1.39
LPCAT2-208ENST00000566915 BAZ1AQ9NRL2 1556 aaPredicted RBP6.35□□□□□ -1.39
LPCAT2-208ENST00000566915 PDS5BQ9NTI5 1447 aa6.33□□□□□ -1.4
LPCAT2-208ENST00000566915 YTHDC1Q96MU7 727 aaKnown RBP6.3□□□□□ -1.4
LPCAT2-208ENST00000566915 TTBK1Q5TCY1 1321 aaPredicted RBP6.29□□□□□ -1.4
LPCAT2-208ENST00000566915 EIF4G1Q04637 1599 aaKnown RBP6.28□□□□□ -1.4
LPCAT2-208ENST00000566915 FBLN2P98095 1184 aa6.24□□□□□ -1.41
LPCAT2-208ENST00000566915 CC2D2AQ9P2K1 1620 aa6.24□□□□□ -1.41
LPCAT2-208ENST00000566915 CLSPNQ9HAW4 1339 aa6.24□□□□□ -1.41
LPCAT2-208ENST00000566915 DAXXQ9UER7 740 aaPredicted RBP6.23□□□□□ -1.41
LPCAT2-208ENST00000566915 ATP1B4Q9UN42 357 aaPredicted RBP6.22□□□□□ -1.41
LPCAT2-208ENST00000566915 NPM1P06748 294 aaKnown RBP eCLIP6.22□□□□□ -1.41
LPCAT2-208ENST00000566915 DIEXFQ68CQ4 756 aaKnown RBP6.22□□□□□ -1.41
LPCAT2-208ENST00000566915 NCAPD3P42695 1498 aa6.22□□□□□ -1.41
LPCAT2-208ENST00000566915 ATAD2BQ9ULI0 1458 aa6.2□□□□□ -1.42
LPCAT2-208ENST00000566915 RANGAP1P46060 587 aaPredicted RBP6.2□□□□□ -1.42
LPCAT2-208ENST00000566915 LOC105371045A0A1W2PR82 267 aa6.18□□□□□ -1.42
LPCAT2-208ENST00000566915 CADPSQ9ULU8 1353 aa6.18□□□□□ -1.42
LPCAT2-208ENST00000566915 ABCC8Q09428 1581 aa6.18□□□□□ -1.42
LPCAT2-208ENST00000566915 SMARCA4P51532 1647 aa6.18□□□□□ -1.42
LPCAT2-208ENST00000566915 BICRAQ9NZM4 1560 aa6.18□□□□□ -1.42
LPCAT2-208ENST00000566915 CHMP7Q8WUX9 453 aaPredicted RBP6.17□□□□□ -1.42
LPCAT2-208ENST00000566915 HMGXB3Q12766 1538 aa6.17□□□□□ -1.42
LPCAT2-208ENST00000566915 CEP164Q9UPV0 1460 aa6.17□□□□□ -1.42
LPCAT2-208ENST00000566915 RTL5Q5HYW3 569 aaPredicted RBP6.15□□□□□ -1.42
LPCAT2-208ENST00000566915 DNAJC5BQ9UF47 199 aa6.15□□□□□ -1.42
LPCAT2-208ENST00000566915 HNRNPUL2Q1KMD3 747 aaKnown RBP6.13□□□□□ -1.43
LPCAT2-208ENST00000566915 ZNF316A6NFI3 1004 aaPredicted RBP6.12□□□□□ -1.43
LPCAT2-208ENST00000566915 RSF1Q96T23 1441 aaPredicted RBP6.12□□□□□ -1.43
LPCAT2-208ENST00000566915 CUX2O14529 1486 aa6.12□□□□□ -1.43
LPCAT2-208ENST00000566915 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.12□□□□□ -1.43
LPCAT2-208ENST00000566915 PPARGC1BQ86YN6 1023 aaKnown RBP6.12□□□□□ -1.43
LPCAT2-208ENST00000566915 OSCARQ8IYS5 282 aa6.11□□□□□ -1.43
LPCAT2-208ENST00000566915 MYT1LQ9UL68 1186 aa6.11□□□□□ -1.43
LPCAT2-208ENST00000566915 TOP2AP11388 1531 aaKnown RBP6.11□□□□□ -1.43
LPCAT2-208ENST00000566915 MRC2Q9UBG0 1479 aa6.1□□□□□ -1.43
LPCAT2-208ENST00000566915 ACIN1Q9UKV3 1341 aaKnown RBP6.1□□□□□ -1.43
LPCAT2-208ENST00000566915 LAMC3Q9Y6N6 1575 aa6.09□□□□□ -1.43
LPCAT2-208ENST00000566915 UNC13AQ9UPW8 1703 aa6.09□□□□□ -1.43
LPCAT2-208ENST00000566915 ANP32CO43423 234 aa6.08□□□□□ -1.44
LPCAT2-208ENST00000566915 GTF3C3Q9Y5Q9 886 aa6.08□□□□□ -1.44
LPCAT2-208ENST00000566915 FANCD2Q9BXW9 1451 aa6.08□□□□□ -1.44
LPCAT2-208ENST00000566915 MROH2BQ7Z745 1585 aa6.08□□□□□ -1.44
LPCAT2-208ENST00000566915 CDK11AQ9UQ88 783 aaPredicted RBP6.08□□□□□ -1.44
LPCAT2-208ENST00000566915 ITGAEP38570 1179 aa6.07□□□□□ -1.44
LPCAT2-208ENST00000566915 TRHP20396 242 aaPredicted RBP6.05□□□□□ -1.44
LPCAT2-208ENST00000566915 WRNQ14191 1432 aaPredicted RBP eCLIP6.05□□□□□ -1.44
LPCAT2-208ENST00000566915 CSRNP3Q8WYN3 585 aa6.03□□□□□ -1.44
LPCAT2-208ENST00000566915 IFT140Q96RY7 1462 aa6.03□□□□□ -1.44
LPCAT2-208ENST00000566915 SOGA1O94964 1423 aa6.02□□□□□ -1.45
LPCAT2-208ENST00000566915 FAM50AQ14320 339 aaKnown RBP6.01□□□□□ -1.45
LPCAT2-208ENST00000566915 KIF27Q86VH2 1401 aa6.01□□□□□ -1.45
LPCAT2-208ENST00000566915 POLR3GLQ9BT43 218 aa6□□□□□ -1.45
LPCAT2-208ENST00000566915 CCDC88BA6NC98 1476 aa6□□□□□ -1.45
LPCAT2-208ENST00000566915 ESF1Q9H501 851 aaKnown RBP5.99□□□□□ -1.45
LPCAT2-208ENST00000566915 CARMIL2Q6F5E8 1435 aa5.99□□□□□ -1.45
LPCAT2-208ENST00000566915 EEA1Q15075 1411 aa5.99□□□□□ -1.45
LPCAT2-208ENST00000566915 PEG3Q9GZU2 1588 aa5.99□□□□□ -1.45
LPCAT2-208ENST00000566915 ANP32AP39687 249 aaKnown RBP5.98□□□□□ -1.45
LPCAT2-208ENST00000566915 CFTRP13569 1480 aa5.98□□□□□ -1.45
LPCAT2-208ENST00000566915 WIZO95785 1651 aa5.97□□□□□ -1.45
LPCAT2-208ENST00000566915 TRIM52Q96A61 297 aa5.97□□□□□ -1.45
LPCAT2-208ENST00000566915 NEUROD1Q13562 356 aa5.95□□□□□ -1.46
LPCAT2-208ENST00000566915 NESP48681 1621 aa5.94□□□□□ -1.46
LPCAT2-208ENST00000566915 ZBTB47Q9UFB7 747 aaPredicted RBP5.93□□□□□ -1.46
LPCAT2-208ENST00000566915 GRIN2BQ13224 1484 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms