RNA–Protein interactions for RNA: ENST00000564084.1

LPCAT2-204, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 3

Gene LPCAT2, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-204ENST00000564084 AEBP2Q6ZN18 517 aaPredicted RBP27.37■■□□□ 1.97
LPCAT2-204ENST00000564084 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
LPCAT2-204ENST00000564084 SENP3Q9H4L4 574 aaPredicted RBP23.31■■□□□ 1.32
LPCAT2-204ENST00000564084 PHF23Q9BUL5 403 aaPredicted RBP23.09■■□□□ 1.29
LPCAT2-204ENST00000564084 FOXD1Q16676 465 aa21.72■■□□□ 1.07
LPCAT2-204ENST00000564084 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
LPCAT2-204ENST00000564084 PLPPR3Q6T4P5 718 aa20.98■□□□□ 0.95
LPCAT2-204ENST00000564084 PPP6R1Q9UPN7 881 aa20.47■□□□□ 0.87
LPCAT2-204ENST00000564084 ADRA2BP18089 450 aa20.44■□□□□ 0.86
LPCAT2-204ENST00000564084 PIAS4Q8N2W9 510 aaPredicted RBP20.36■□□□□ 0.85
LPCAT2-204ENST00000564084 MSH5O43196 834 aa20.25■□□□□ 0.83
LPCAT2-204ENST00000564084 POTEDQ86YR6 584 aa19.49■□□□□ 0.71
LPCAT2-204ENST00000564084 CCDC180Q9P1Z9 1646 aa18.77■□□□□ 0.6
LPCAT2-204ENST00000564084 MAPK8IP2Q13387 824 aaPredicted RBP18.74■□□□□ 0.59
LPCAT2-204ENST00000564084 SCAF1Q9H7N4 1312 aaKnown RBP18.69■□□□□ 0.58
LPCAT2-204ENST00000564084 DMRT2Q9Y5R5 561 aa18.5■□□□□ 0.55
LPCAT2-204ENST00000564084 PPP4R3CPQ6ZMV5 832 aa18.44■□□□□ 0.54
LPCAT2-204ENST00000564084 CNKSR2Q8WXI2 1034 aa18.04■□□□□ 0.48
LPCAT2-204ENST00000564084 HOXD11P31277 338 aaPredicted RBP17.88■□□□□ 0.45
LPCAT2-204ENST00000564084 DCAF8L1A6NGE4 600 aa17.86■□□□□ 0.45
LPCAT2-204ENST00000564084 RNF216Q9NWF9 866 aaPredicted RBP17.81■□□□□ 0.44
LPCAT2-204ENST00000564084 ABCC9O60706 1549 aa17.81■□□□□ 0.44
LPCAT2-204ENST00000564084 ZCCHC6Q5VYS8 1495 aaKnown RBP17.81■□□□□ 0.44
LPCAT2-204ENST00000564084 NCBP3Q53F19 620 aaKnown RBP17.79■□□□□ 0.44
LPCAT2-204ENST00000564084 DCAF1Q9Y4B6 1507 aa17.63■□□□□ 0.41
LPCAT2-204ENST00000564084 MYO15BQ96JP2 1530 aa17.55■□□□□ 0.4
LPCAT2-204ENST00000564084 NPM3O75607 178 aaKnown RBP17.5■□□□□ 0.39
LPCAT2-204ENST00000564084 NACADO15069 1562 aa17.47■□□□□ 0.39
LPCAT2-204ENST00000564084 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
LPCAT2-204ENST00000564084 CACNB1Q02641 598 aaPredicted RBP17.34■□□□□ 0.37
LPCAT2-204ENST00000564084 DCAF8L2P0C7V8 631 aa17.33■□□□□ 0.36
LPCAT2-204ENST00000564084 KCNA4P22459 653 aa17.33■□□□□ 0.36
LPCAT2-204ENST00000564084 RNF39Q9H2S5 420 aa17.28■□□□□ 0.36
LPCAT2-204ENST00000564084 DNAJC5BQ9UF47 199 aa17.18■□□□□ 0.34
LPCAT2-204ENST00000564084 UNC13AQ9UPW8 1703 aa17.14■□□□□ 0.33
LPCAT2-204ENST00000564084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.33
LPCAT2-204ENST00000564084 SCRIBQ14160 1630 aa17.07■□□□□ 0.32
LPCAT2-204ENST00000564084 C1QBPQ07021 282 aaKnown RBP17.06■□□□□ 0.32
LPCAT2-204ENST00000564084 BICRAQ9NZM4 1560 aa16.92■□□□□ 0.3
LPCAT2-204ENST00000564084 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
LPCAT2-204ENST00000564084 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
LPCAT2-204ENST00000564084 SLC4A2P04920 1241 aa16.66■□□□□ 0.26
LPCAT2-204ENST00000564084 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
LPCAT2-204ENST00000564084 CECR2Q9BXF3 1484 aa16.48■□□□□ 0.23
LPCAT2-204ENST00000564084 CAPN15O75808 1086 aa16.46■□□□□ 0.23
LPCAT2-204ENST00000564084 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
LPCAT2-204ENST00000564084 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
LPCAT2-204ENST00000564084 BAZ1AQ9NRL2 1556 aaPredicted RBP16.42■□□□□ 0.22
LPCAT2-204ENST00000564084 SMARCA4P51532 1647 aa16.41■□□□□ 0.22
LPCAT2-204ENST00000564084 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
LPCAT2-204ENST00000564084 EIF4G1Q04637 1599 aaKnown RBP16.37■□□□□ 0.21
LPCAT2-204ENST00000564084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.32■□□□□ 0.2
LPCAT2-204ENST00000564084 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
LPCAT2-204ENST00000564084 RSF1Q96T23 1441 aaPredicted RBP16.31■□□□□ 0.2
LPCAT2-204ENST00000564084 APLP2Q06481 763 aa16.29■□□□□ 0.2
LPCAT2-204ENST00000564084 PEG3Q9GZU2 1588 aa16.29■□□□□ 0.2
LPCAT2-204ENST00000564084 DSG3P32926 999 aa16.27■□□□□ 0.2
LPCAT2-204ENST00000564084 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
LPCAT2-204ENST00000564084 WIZO95785 1651 aa16.25■□□□□ 0.19
LPCAT2-204ENST00000564084 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
LPCAT2-204ENST00000564084 CC2D2AQ9P2K1 1620 aa16.2■□□□□ 0.18
LPCAT2-204ENST00000564084 SMARCA2P51531 1590 aa16.17■□□□□ 0.18
LPCAT2-204ENST00000564084 ATAD2BQ9ULI0 1458 aa16.17■□□□□ 0.18
LPCAT2-204ENST00000564084 MYCNP04198 464 aaPredicted RBP16.17■□□□□ 0.18
LPCAT2-204ENST00000564084 ZNF219Q9P2Y4 722 aaPredicted RBP16.15■□□□□ 0.18
LPCAT2-204ENST00000564084 FOXD4L1Q9NU39 408 aa16.11■□□□□ 0.17
LPCAT2-204ENST00000564084 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
LPCAT2-204ENST00000564084 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
LPCAT2-204ENST00000564084 ABCB7O75027 752 aa16.09■□□□□ 0.17
LPCAT2-204ENST00000564084 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
LPCAT2-204ENST00000564084 SUPT5HO00267 1087 aaKnown RBP16.07■□□□□ 0.16
LPCAT2-204ENST00000564084 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
LPCAT2-204ENST00000564084 ZBTB22O15209 634 aa15.9■□□□□ 0.14
LPCAT2-204ENST00000564084 CCDC88BA6NC98 1476 aa15.85■□□□□ 0.13
LPCAT2-204ENST00000564084 POLA2Q14181 598 aa15.83■□□□□ 0.12
LPCAT2-204ENST00000564084 ATF5Q9Y2D1 282 aaPredicted RBP15.82■□□□□ 0.12
LPCAT2-204ENST00000564084 PRDM2Q13029 1718 aa15.71■□□□□ 0.1
LPCAT2-204ENST00000564084 CFTRP13569 1480 aa15.65■□□□□ 0.1
LPCAT2-204ENST00000564084 LAMC3Q9Y6N6 1575 aa15.63■□□□□ 0.09
LPCAT2-204ENST00000564084 CADPSQ9ULU8 1353 aa15.61■□□□□ 0.09
LPCAT2-204ENST00000564084 NESP48681 1621 aa15.57■□□□□ 0.08
LPCAT2-204ENST00000564084 ATXN8OSP0DMR3 200 aa15.57■□□□□ 0.08
LPCAT2-204ENST00000564084 RBM42Q9BTD8 480 aaKnown RBP15.51■□□□□ 0.07
LPCAT2-204ENST00000564084 KIF21AQ7Z4S6 1674 aa15.49■□□□□ 0.07
LPCAT2-204ENST00000564084 ZBTB12Q9Y330 459 aaPredicted RBP15.46■□□□□ 0.07
LPCAT2-204ENST00000564084 FANCD2Q9BXW9 1451 aa15.45■□□□□ 0.06
LPCAT2-204ENST00000564084 ABCC8Q09428 1581 aa15.43■□□□□ 0.06
LPCAT2-204ENST00000564084 PDS5BQ9NTI5 1447 aa15.42■□□□□ 0.06
LPCAT2-204ENST00000564084 BIVM-ERCC5R4GMW8 1640 aa15.38■□□□□ 0.05
LPCAT2-204ENST00000564084 CEP164Q9UPV0 1460 aa15.38■□□□□ 0.05
LPCAT2-204ENST00000564084 CSRNP3Q8WYN3 585 aa15.37■□□□□ 0.05
LPCAT2-204ENST00000564084 SYNJ1O43426 1573 aa15.36■□□□□ 0.05
LPCAT2-204ENST00000564084 TOP2BQ02880 1626 aa15.34■□□□□ 0.05
LPCAT2-204ENST00000564084 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
LPCAT2-204ENST00000564084 CUX1P39880 1505 aa15.33■□□□□ 0.05
LPCAT2-204ENST00000564084 THOC2Q8NI27 1593 aaKnown RBP15.33■□□□□ 0.05
LPCAT2-204ENST00000564084 POTEHQ6S545 545 aa15.32■□□□□ 0.04
LPCAT2-204ENST00000564084 URB2Q14146 1524 aaKnown RBP15.31■□□□□ 0.04
LPCAT2-204ENST00000564084 DNMBPQ6XZF7 1577 aa15.31■□□□□ 0.04
LPCAT2-204ENST00000564084 EHMT2Q96KQ7 1210 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms