RNA–Protein interactions for RNA: ENST00000562607.5

TCF4-214, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-214ENST00000562607 AEBP2Q6ZN18 517 aaPredicted RBP19.52■□□□□ 0.72
TCF4-214ENST00000562607 CHIC1Q5VXU3 224 aa18.19■□□□□ 0.5
TCF4-214ENST00000562607 SENP3Q9H4L4 574 aaPredicted RBP16.68■□□□□ 0.26
TCF4-214ENST00000562607 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
TCF4-214ENST00000562607 FOXD1Q16676 465 aa15.61■□□□□ 0.09
TCF4-214ENST00000562607 NISCHQ9Y2I1 1504 aa15.54■□□□□ 0.08
TCF4-214ENST00000562607 POTEDQ86YR6 584 aa15.07■□□□□ 0
TCF4-214ENST00000562607 MSH5O43196 834 aa14.74□□□□□ -0.05
TCF4-214ENST00000562607 PIAS4Q8N2W9 510 aaPredicted RBP14.44□□□□□ -0.1
TCF4-214ENST00000562607 PPP6R1Q9UPN7 881 aa14.32□□□□□ -0.12
TCF4-214ENST00000562607 PLPPR3Q6T4P5 718 aa14.3□□□□□ -0.12
TCF4-214ENST00000562607 ADRA2BP18089 450 aa14.21□□□□□ -0.13
TCF4-214ENST00000562607 CCDC180Q9P1Z9 1646 aa13.82□□□□□ -0.2
TCF4-214ENST00000562607 ABCC9O60706 1549 aa13.79□□□□□ -0.2
TCF4-214ENST00000562607 DCAF8L2P0C7V8 631 aa13.22□□□□□ -0.29
TCF4-214ENST00000562607 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
TCF4-214ENST00000562607 DMRT2Q9Y5R5 561 aa13.18□□□□□ -0.3
TCF4-214ENST00000562607 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
TCF4-214ENST00000562607 NACADO15069 1562 aa13.08□□□□□ -0.32
TCF4-214ENST00000562607 SCAF1Q9H7N4 1312 aaKnown RBP13□□□□□ -0.33
TCF4-214ENST00000562607 MYO15BQ96JP2 1530 aa12.93□□□□□ -0.34
TCF4-214ENST00000562607 PABPN1Q86U42 306 aaKnown RBP eCLIP12.91□□□□□ -0.34
TCF4-214ENST00000562607 ZCCHC6Q5VYS8 1495 aaKnown RBP12.9□□□□□ -0.34
TCF4-214ENST00000562607 CACNB1Q02641 598 aaPredicted RBP12.87□□□□□ -0.35
TCF4-214ENST00000562607 DCAF1Q9Y4B6 1507 aa12.82□□□□□ -0.36
TCF4-214ENST00000562607 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
TCF4-214ENST00000562607 UNC13AQ9UPW8 1703 aa12.76□□□□□ -0.37
TCF4-214ENST00000562607 BICRAQ9NZM4 1560 aa12.72□□□□□ -0.37
TCF4-214ENST00000562607 SCRIBQ14160 1630 aa12.67□□□□□ -0.38
TCF4-214ENST00000562607 SHROOM4Q9ULL8 1493 aa12.58□□□□□ -0.4
TCF4-214ENST00000562607 HOXD11P31277 338 aaPredicted RBP12.57□□□□□ -0.4
TCF4-214ENST00000562607 RNF39Q9H2S5 420 aa12.57□□□□□ -0.4
TCF4-214ENST00000562607 DCAF8L1A6NGE4 600 aa12.56□□□□□ -0.4
TCF4-214ENST00000562607 PPP4R3CPQ6ZMV5 832 aa12.49□□□□□ -0.41
TCF4-214ENST00000562607 EIF4G1Q04637 1599 aaKnown RBP12.42□□□□□ -0.42
TCF4-214ENST00000562607 CC2D2AQ9P2K1 1620 aa12.41□□□□□ -0.42
TCF4-214ENST00000562607 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.42
TCF4-214ENST00000562607 C1QBPQ07021 282 aaKnown RBP12.36□□□□□ -0.43
TCF4-214ENST00000562607 CNKSR2Q8WXI2 1034 aa12.35□□□□□ -0.43
TCF4-214ENST00000562607 RNF216Q9NWF9 866 aaPredicted RBP12.35□□□□□ -0.43
TCF4-214ENST00000562607 NCAPD3P42695 1498 aa12.09□□□□□ -0.47
TCF4-214ENST00000562607 ATAD2BQ9ULI0 1458 aa12.08□□□□□ -0.47
TCF4-214ENST00000562607 SMARCA4P51532 1647 aa12.08□□□□□ -0.48
TCF4-214ENST00000562607 BAZ1AQ9NRL2 1556 aaPredicted RBP12.06□□□□□ -0.48
TCF4-214ENST00000562607 SMARCA2P51531 1590 aa12.05□□□□□ -0.48
TCF4-214ENST00000562607 BAZ1BQ9UIG0 1483 aaKnown RBP11.99□□□□□ -0.49
TCF4-214ENST00000562607 HMGXB3Q12766 1538 aa11.99□□□□□ -0.49
TCF4-214ENST00000562607 MROH2BQ7Z745 1585 aa11.98□□□□□ -0.49
TCF4-214ENST00000562607 PEG3Q9GZU2 1588 aa11.93□□□□□ -0.5
TCF4-214ENST00000562607 ERCC6Q03468 1493 aa11.92□□□□□ -0.5
TCF4-214ENST00000562607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.9□□□□□ -0.5
TCF4-214ENST00000562607 NCBP3Q53F19 620 aaKnown RBP11.87□□□□□ -0.51
TCF4-214ENST00000562607 NESP48681 1621 aa11.86□□□□□ -0.51
TCF4-214ENST00000562607 WIZO95785 1651 aa11.83□□□□□ -0.52
TCF4-214ENST00000562607 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
TCF4-214ENST00000562607 CUX2O14529 1486 aa11.8□□□□□ -0.52
TCF4-214ENST00000562607 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
TCF4-214ENST00000562607 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.52
TCF4-214ENST00000562607 CADPSQ9ULU8 1353 aa11.77□□□□□ -0.53
TCF4-214ENST00000562607 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
TCF4-214ENST00000562607 POTEHQ6S545 545 aa11.72□□□□□ -0.53
TCF4-214ENST00000562607 TOP2AP11388 1531 aaKnown RBP11.7□□□□□ -0.54
TCF4-214ENST00000562607 DNAJC5Q9H3Z4 198 aa11.67□□□□□ -0.54
TCF4-214ENST00000562607 KIF21AQ7Z4S6 1674 aa11.66□□□□□ -0.54
TCF4-214ENST00000562607 THOC2Q8NI27 1593 aaKnown RBP11.66□□□□□ -0.54
TCF4-214ENST00000562607 DSG3P32926 999 aa11.64□□□□□ -0.55
TCF4-214ENST00000562607 U3KPZ7 1027 aaPredicted RBP11.64□□□□□ -0.55
TCF4-214ENST00000562607 CFTRP13569 1480 aa11.63□□□□□ -0.55
TCF4-214ENST00000562607 MRC2Q9UBG0 1479 aa11.63□□□□□ -0.55
TCF4-214ENST00000562607 FANCD2Q9BXW9 1451 aa11.62□□□□□ -0.55
TCF4-214ENST00000562607 CEP164Q9UPV0 1460 aa11.62□□□□□ -0.55
TCF4-214ENST00000562607 CCDC88BA6NC98 1476 aa11.59□□□□□ -0.55
TCF4-214ENST00000562607 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
TCF4-214ENST00000562607 WDR62O43379 1518 aa11.55□□□□□ -0.56
TCF4-214ENST00000562607 CAPN15O75808 1086 aa11.54□□□□□ -0.56
TCF4-214ENST00000562607 SUPT5HO00267 1087 aaKnown RBP11.5□□□□□ -0.57
TCF4-214ENST00000562607 URB2Q14146 1524 aaKnown RBP11.49□□□□□ -0.57
TCF4-214ENST00000562607 PRDM2Q13029 1718 aa11.43□□□□□ -0.58
TCF4-214ENST00000562607 ABCC8Q09428 1581 aa11.4□□□□□ -0.58
TCF4-214ENST00000562607 TOPBP1Q92547 1522 aa11.4□□□□□ -0.59
TCF4-214ENST00000562607 IFT140Q96RY7 1462 aa11.38□□□□□ -0.59
TCF4-214ENST00000562607 OSCARQ8IYS5 282 aa11.36□□□□□ -0.59
TCF4-214ENST00000562607 DNMBPQ6XZF7 1577 aa11.36□□□□□ -0.59
TCF4-214ENST00000562607 ZNF608Q9ULD9 1512 aaPredicted RBP11.34□□□□□ -0.59
TCF4-214ENST00000562607 SLC4A2P04920 1241 aa11.32□□□□□ -0.6
TCF4-214ENST00000562607 SOGA1O94964 1423 aa11.29□□□□□ -0.6
TCF4-214ENST00000562607 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.6
TCF4-214ENST00000562607 POLA1P09884 1462 aaPredicted RBP11.29□□□□□ -0.6
TCF4-214ENST00000562607 TRIM41Q8WV44 630 aa11.28□□□□□ -0.6
TCF4-214ENST00000562607 RAD54L2Q9Y4B4 1467 aa11.27□□□□□ -0.6
TCF4-214ENST00000562607 TRHP20396 242 aaPredicted RBP11.27□□□□□ -0.61
TCF4-214ENST00000562607 FBLN2P98095 1184 aa11.26□□□□□ -0.61
TCF4-214ENST00000562607 ZNF219Q9P2Y4 722 aaPredicted RBP11.25□□□□□ -0.61
TCF4-214ENST00000562607 TDRD9Q8NDG6 1382 aaKnown RBP11.25□□□□□ -0.61
TCF4-214ENST00000562607 FGD5Q6ZNL6 1462 aa11.25□□□□□ -0.61
TCF4-214ENST00000562607 CUX1P39880 1505 aa11.25□□□□□ -0.61
TCF4-214ENST00000562607 EIF4G3O43432 1585 aaKnown RBP11.24□□□□□ -0.61
TCF4-214ENST00000562607 TARBP1Q13395 1621 aaKnown RBP11.24□□□□□ -0.61
TCF4-214ENST00000562607 APLP2Q06481 763 aa11.24□□□□□ -0.61
TCF4-214ENST00000562607 ABCB7O75027 752 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms