RNA–Protein interactions for RNA: ENST00000561317.1

SPRED1-203, Transcript of sprouty related EVH1 domain containing 1, humanhuman

TSL 4

Gene SPRED1, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-203ENST00000561317 AEBP2Q6ZN18 517 aaPredicted RBP20.42■□□□□ 0.86
SPRED1-203ENST00000561317 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
SPRED1-203ENST00000561317 SENP3Q9H4L4 574 aaPredicted RBP17.49■□□□□ 0.39
SPRED1-203ENST00000561317 PHF23Q9BUL5 403 aaPredicted RBP17.26■□□□□ 0.35
SPRED1-203ENST00000561317 NISCHQ9Y2I1 1504 aa16.29■□□□□ 0.2
SPRED1-203ENST00000561317 FOXD1Q16676 465 aa16.24■□□□□ 0.19
SPRED1-203ENST00000561317 PLPPR3Q6T4P5 718 aa15.74■□□□□ 0.11
SPRED1-203ENST00000561317 PIAS4Q8N2W9 510 aaPredicted RBP15.31■□□□□ 0.04
SPRED1-203ENST00000561317 ADRA2BP18089 450 aa15.28■□□□□ 0.04
SPRED1-203ENST00000561317 PPP6R1Q9UPN7 881 aa15.25■□□□□ 0.03
SPRED1-203ENST00000561317 ABCC9O60706 1549 aa15.23■□□□□ 0.03
SPRED1-203ENST00000561317 MSH5O43196 834 aa15.21■□□□□ 0.03
SPRED1-203ENST00000561317 CCDC180Q9P1Z9 1646 aa14.69□□□□□ -0.06
SPRED1-203ENST00000561317 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
SPRED1-203ENST00000561317 POTEDQ86YR6 584 aa14.59□□□□□ -0.07
SPRED1-203ENST00000561317 RB1CC1Q8TDY2 1594 aa14.24□□□□□ -0.13
SPRED1-203ENST00000561317 PABPN1Q86U42 306 aaKnown RBP eCLIP14.2□□□□□ -0.14
SPRED1-203ENST00000561317 DCAF8L2P0C7V8 631 aa14.19□□□□□ -0.14
SPRED1-203ENST00000561317 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
SPRED1-203ENST00000561317 NACADO15069 1562 aa14.03□□□□□ -0.16
SPRED1-203ENST00000561317 MAPK8IP2Q13387 824 aaPredicted RBP13.98□□□□□ -0.17
SPRED1-203ENST00000561317 UNC13AQ9UPW8 1703 aa13.9□□□□□ -0.18
SPRED1-203ENST00000561317 PPP4R3CPQ6ZMV5 832 aa13.87□□□□□ -0.19
SPRED1-203ENST00000561317 DMRT2Q9Y5R5 561 aa13.84□□□□□ -0.19
SPRED1-203ENST00000561317 BICRAQ9NZM4 1560 aa13.81□□□□□ -0.2
SPRED1-203ENST00000561317 CECR2Q9BXF3 1484 aa13.72□□□□□ -0.21
SPRED1-203ENST00000561317 KCNA4P22459 653 aa13.71□□□□□ -0.21
SPRED1-203ENST00000561317 DNAJC5Q9H3Z4 198 aa13.69□□□□□ -0.22
SPRED1-203ENST00000561317 CC2D2AQ9P2K1 1620 aa13.67□□□□□ -0.22
SPRED1-203ENST00000561317 MYO15BQ96JP2 1530 aa13.63□□□□□ -0.23
SPRED1-203ENST00000561317 NCBP3Q53F19 620 aaKnown RBP13.53□□□□□ -0.24
SPRED1-203ENST00000561317 CNKSR2Q8WXI2 1034 aa13.52□□□□□ -0.25
SPRED1-203ENST00000561317 EIF4G1Q04637 1599 aaKnown RBP13.52□□□□□ -0.25
SPRED1-203ENST00000561317 SCRIBQ14160 1630 aa13.5□□□□□ -0.25
SPRED1-203ENST00000561317 SHROOM4Q9ULL8 1493 aa13.49□□□□□ -0.25
SPRED1-203ENST00000561317 DCAF8L1A6NGE4 600 aa13.49□□□□□ -0.25
SPRED1-203ENST00000561317 ZCCHC6Q5VYS8 1495 aaKnown RBP13.38□□□□□ -0.27
SPRED1-203ENST00000561317 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
SPRED1-203ENST00000561317 HOXD11P31277 338 aaPredicted RBP13.35□□□□□ -0.27
SPRED1-203ENST00000561317 DCAF1Q9Y4B6 1507 aa13.34□□□□□ -0.27
SPRED1-203ENST00000561317 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
SPRED1-203ENST00000561317 CUX2O14529 1486 aa13.17□□□□□ -0.3
SPRED1-203ENST00000561317 ERCC6Q03468 1493 aa13.17□□□□□ -0.3
SPRED1-203ENST00000561317 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
SPRED1-203ENST00000561317 SLC4A1APQ9BWU0 796 aaKnown RBP13.06□□□□□ -0.32
SPRED1-203ENST00000561317 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
SPRED1-203ENST00000561317 NCAPD3P42695 1498 aa12.97□□□□□ -0.33
SPRED1-203ENST00000561317 NESP48681 1621 aa12.96□□□□□ -0.33
SPRED1-203ENST00000561317 RNF39Q9H2S5 420 aa12.92□□□□□ -0.34
SPRED1-203ENST00000561317 ATAD2BQ9ULI0 1458 aa12.91□□□□□ -0.34
SPRED1-203ENST00000561317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.88□□□□□ -0.35
SPRED1-203ENST00000561317 SMARCA2P51531 1590 aa12.81□□□□□ -0.36
SPRED1-203ENST00000561317 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
SPRED1-203ENST00000561317 THOC2Q8NI27 1593 aaKnown RBP12.8□□□□□ -0.36
SPRED1-203ENST00000561317 HMGXB3Q12766 1538 aa12.79□□□□□ -0.36
SPRED1-203ENST00000561317 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
SPRED1-203ENST00000561317 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
SPRED1-203ENST00000561317 SMARCA4P51532 1647 aa12.77□□□□□ -0.36
SPRED1-203ENST00000561317 PDS5BQ9NTI5 1447 aa12.72□□□□□ -0.37
SPRED1-203ENST00000561317 KIF21AQ7Z4S6 1674 aa12.72□□□□□ -0.37
SPRED1-203ENST00000561317 LAMC3Q9Y6N6 1575 aa12.72□□□□□ -0.37
SPRED1-203ENST00000561317 BAZ1AQ9NRL2 1556 aaPredicted RBP12.65□□□□□ -0.38
SPRED1-203ENST00000561317 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
SPRED1-203ENST00000561317 CSRNP3Q8WYN3 585 aa12.65□□□□□ -0.38
SPRED1-203ENST00000561317 ZBTB22O15209 634 aa12.64□□□□□ -0.39
SPRED1-203ENST00000561317 MRC2Q9UBG0 1479 aa12.61□□□□□ -0.39
SPRED1-203ENST00000561317 CADPSQ9ULU8 1353 aa12.61□□□□□ -0.39
SPRED1-203ENST00000561317 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
SPRED1-203ENST00000561317 FOXD4L1Q9NU39 408 aa12.59□□□□□ -0.39
SPRED1-203ENST00000561317 MROH2BQ7Z745 1585 aa12.58□□□□□ -0.4
SPRED1-203ENST00000561317 PEG3Q9GZU2 1588 aa12.58□□□□□ -0.4
SPRED1-203ENST00000561317 WDR62O43379 1518 aa12.54□□□□□ -0.4
SPRED1-203ENST00000561317 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
SPRED1-203ENST00000561317 CEP164Q9UPV0 1460 aa12.5□□□□□ -0.41
SPRED1-203ENST00000561317 FANCD2Q9BXW9 1451 aa12.46□□□□□ -0.41
SPRED1-203ENST00000561317 TRHP20396 242 aaPredicted RBP12.44□□□□□ -0.42
SPRED1-203ENST00000561317 CYB5RLQ6IPT4 315 aa12.43□□□□□ -0.42
SPRED1-203ENST00000561317 RIMBP3CA6NJZ7 1639 aa12.43□□□□□ -0.42
SPRED1-203ENST00000561317 RIMBP3BA6NNM3 1639 aa12.43□□□□□ -0.42
SPRED1-203ENST00000561317 RIMBP3Q9UFD9 1639 aa12.43□□□□□ -0.42
SPRED1-203ENST00000561317 WIZO95785 1651 aa12.42□□□□□ -0.42
SPRED1-203ENST00000561317 CAPN15O75808 1086 aa12.4□□□□□ -0.42
SPRED1-203ENST00000561317 URB2Q14146 1524 aaKnown RBP12.37□□□□□ -0.43
SPRED1-203ENST00000561317 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
SPRED1-203ENST00000561317 ARHGEF11O15085 1522 aa12.35□□□□□ -0.43
SPRED1-203ENST00000561317 CFTRP13569 1480 aa12.34□□□□□ -0.43
SPRED1-203ENST00000561317 SPINK5Q9NQ38 1064 aaPredicted RBP12.32□□□□□ -0.44
SPRED1-203ENST00000561317 ZNF608Q9ULD9 1512 aaPredicted RBP12.31□□□□□ -0.44
SPRED1-203ENST00000561317 FBLN2P98095 1184 aa12.3□□□□□ -0.44
SPRED1-203ENST00000561317 APLP2Q06481 763 aa12.3□□□□□ -0.44
SPRED1-203ENST00000561317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.29□□□□□ -0.44
SPRED1-203ENST00000561317 HNRNPUL2Q1KMD3 747 aaKnown RBP12.29□□□□□ -0.44
SPRED1-203ENST00000561317 IFT140Q96RY7 1462 aa12.26□□□□□ -0.45
SPRED1-203ENST00000561317 RSF1Q96T23 1441 aaPredicted RBP12.23□□□□□ -0.45
SPRED1-203ENST00000561317 ARAP1Q96P48 1450 aa12.21□□□□□ -0.46
SPRED1-203ENST00000561317 SAMD1Q6SPF0 538 aaPredicted RBP12.2□□□□□ -0.46
SPRED1-203ENST00000561317 SUPT5HO00267 1087 aaKnown RBP12.19□□□□□ -0.46
SPRED1-203ENST00000561317 AQRO60306 1485 aaKnown RBP eCLIP12.19□□□□□ -0.46
SPRED1-203ENST00000561317 TOP2AP11388 1531 aaKnown RBP12.18□□□□□ -0.46
SPRED1-203ENST00000561317 TOPBP1Q92547 1522 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms