RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 NISCHQ9Y2I1 1504 aa36.81■■■■□ 3.48
TRPM1-211ENST00000560658 CCDC180Q9P1Z9 1646 aa31.55■■■□□ 2.64
TRPM1-211ENST00000560658 ZCCHC6Q5VYS8 1495 aaKnown RBP31.18■■■□□ 2.58
TRPM1-211ENST00000560658 SHROOM4Q9ULL8 1493 aa30.76■■■□□ 2.51
TRPM1-211ENST00000560658 DCAF1Q9Y4B6 1507 aa30.54■■■□□ 2.48
TRPM1-211ENST00000560658 SUPT5HO00267 1087 aaKnown RBP30.26■■■□□ 2.44
TRPM1-211ENST00000560658 DCAF8L2P0C7V8 631 aa29.9■■■□□ 2.38
TRPM1-211ENST00000560658 MYO15BQ96JP2 1530 aa29.74■■■□□ 2.35
TRPM1-211ENST00000560658 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
TRPM1-211ENST00000560658 ABCC9O60706 1549 aa29.46■■■□□ 2.31
TRPM1-211ENST00000560658 NACADO15069 1562 aa29.12■■■□□ 2.25
TRPM1-211ENST00000560658 SCRIBQ14160 1630 aa29.08■■■□□ 2.25
TRPM1-211ENST00000560658 RSF1Q96T23 1441 aaPredicted RBP29.03■■■□□ 2.24
TRPM1-211ENST00000560658 RB1CC1Q8TDY2 1594 aa28.88■■■□□ 2.21
TRPM1-211ENST00000560658 HRCP23327 699 aa28.87■■■□□ 2.21
TRPM1-211ENST00000560658 PCGF6Q9BYE7 350 aa28.58■■■□□ 2.17
TRPM1-211ENST00000560658 LOC105371045A0A1W2PR82 267 aa28.5■■■□□ 2.15
TRPM1-211ENST00000560658 TRIM41Q8WV44 630 aa28.46■■■□□ 2.15
TRPM1-211ENST00000560658 MROH2BQ7Z745 1585 aa28.43■■■□□ 2.14
TRPM1-211ENST00000560658 CECR2Q9BXF3 1484 aa28.42■■■□□ 2.14
TRPM1-211ENST00000560658 TRIM26Q12899 539 aaPredicted RBP28.4■■■□□ 2.14
TRPM1-211ENST00000560658 BAZ1AQ9NRL2 1556 aaPredicted RBP28.36■■■□□ 2.13
TRPM1-211ENST00000560658 WIZO95785 1651 aa28.23■■■□□ 2.11
TRPM1-211ENST00000560658 DNAJC5BQ9UF47 199 aa28.14■■■□□ 2.09
TRPM1-211ENST00000560658 EIF4G1Q04637 1599 aaKnown RBP28.09■■■□□ 2.09
TRPM1-211ENST00000560658 TOP2AP11388 1531 aaKnown RBP28.08■■■□□ 2.09
TRPM1-211ENST00000560658 ZEB1P37275 1124 aaPredicted RBP28.06■■■□□ 2.08
TRPM1-211ENST00000560658 SMARCA4P51532 1647 aa28.02■■■□□ 2.08
TRPM1-211ENST00000560658 UNC13AQ9UPW8 1703 aa27.87■■■□□ 2.05
TRPM1-211ENST00000560658 FAM9AQ8IZU1 332 aaPredicted RBP27.85■■■□□ 2.05
TRPM1-211ENST00000560658 SMARCA2P51531 1590 aa27.81■■■□□ 2.04
TRPM1-211ENST00000560658 PPARGC1BQ86YN6 1023 aaKnown RBP27.78■■■□□ 2.04
TRPM1-211ENST00000560658 CCDC88BA6NC98 1476 aa27.77■■■□□ 2.04
TRPM1-211ENST00000560658 EEA1Q15075 1411 aa27.7■■■□□ 2.03
TRPM1-211ENST00000560658 PEG3Q9GZU2 1588 aa27.69■■■□□ 2.02
TRPM1-211ENST00000560658 BICRAQ9NZM4 1560 aa27.59■■■□□ 2.01
TRPM1-211ENST00000560658 WRNQ14191 1432 aaPredicted RBP eCLIP27.55■■■□□ 2
TRPM1-211ENST00000560658 ABCC8Q09428 1581 aa27.51■■□□□ 1.99
TRPM1-211ENST00000560658 TNIKQ9UKE5 1360 aa27.46■■□□□ 1.99
TRPM1-211ENST00000560658 PABPN1Q86U42 306 aaKnown RBP eCLIP27.38■■□□□ 1.97
TRPM1-211ENST00000560658 CEP162Q5TB80 1403 aa27.33■■□□□ 1.97
TRPM1-211ENST00000560658 CSRNP3Q8WYN3 585 aa27.31■■□□□ 1.96
TRPM1-211ENST00000560658 EHMT2Q96KQ7 1210 aa27.3■■□□□ 1.96
TRPM1-211ENST00000560658 SOGA1O94964 1423 aa27.29■■□□□ 1.96
TRPM1-211ENST00000560658 GOLGA3Q08378 1498 aa27.29■■□□□ 1.96
TRPM1-211ENST00000560658 ATAD2BQ9ULI0 1458 aa27.26■■□□□ 1.96
TRPM1-211ENST00000560658 BAZ1BQ9UIG0 1483 aaKnown RBP27.2■■□□□ 1.94
TRPM1-211ENST00000560658 KIF21BO75037 1637 aa27.17■■□□□ 1.94
TRPM1-211ENST00000560658 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
TRPM1-211ENST00000560658 SYNJ1O43426 1573 aa27.07■■□□□ 1.92
TRPM1-211ENST00000560658 RUSC2Q8N2Y8 1516 aa27.06■■□□□ 1.92
TRPM1-211ENST00000560658 UBTFP17480 764 aaKnown RBP27.04■■□□□ 1.92
TRPM1-211ENST00000560658 CCER1Q8TC90 406 aaPredicted RBP27.02■■□□□ 1.92
TRPM1-211ENST00000560658 HMGXB3Q12766 1538 aa26.93■■□□□ 1.9
TRPM1-211ENST00000560658 TOP2BQ02880 1626 aa26.93■■□□□ 1.9
TRPM1-211ENST00000560658 BIVM-ERCC5R4GMW8 1640 aa26.88■■□□□ 1.89
TRPM1-211ENST00000560658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.88■■□□□ 1.89
TRPM1-211ENST00000560658 NCAPD3P42695 1498 aa26.86■■□□□ 1.89
TRPM1-211ENST00000560658 CLIP1P30622 1438 aa26.86■■□□□ 1.89
TRPM1-211ENST00000560658 VPS8Q8N3P4 1428 aa26.83■■□□□ 1.89
TRPM1-211ENST00000560658 ERICH3Q5RHP9 1530 aa26.79■■□□□ 1.88
TRPM1-211ENST00000560658 RAPGEF2Q9Y4G8 1499 aa26.7■■□□□ 1.87
TRPM1-211ENST00000560658 PRXQ9BXM0 1461 aa26.65■■□□□ 1.86
TRPM1-211ENST00000560658 APLP2Q06481 763 aa26.65■■□□□ 1.86
TRPM1-211ENST00000560658 CFTRP13569 1480 aa26.59■■□□□ 1.85
TRPM1-211ENST00000560658 CC2D2AQ9P2K1 1620 aa26.57■■□□□ 1.84
TRPM1-211ENST00000560658 KIF27Q86VH2 1401 aa26.55■■□□□ 1.84
TRPM1-211ENST00000560658 DIEXFQ68CQ4 756 aaKnown RBP26.52■■□□□ 1.84
TRPM1-211ENST00000560658 TTBK1Q5TCY1 1321 aaPredicted RBP26.52■■□□□ 1.84
TRPM1-211ENST00000560658 CUX1P39880 1505 aa26.52■■□□□ 1.84
TRPM1-211ENST00000560658 PRDM2Q13029 1718 aa26.49■■□□□ 1.83
TRPM1-211ENST00000560658 PELP1Q8IZL8 1130 aaKnown RBP26.48■■□□□ 1.83
TRPM1-211ENST00000560658 ZNF316A6NFI3 1004 aaPredicted RBP26.44■■□□□ 1.82
TRPM1-211ENST00000560658 CLSPNQ9HAW4 1339 aa26.44■■□□□ 1.82
TRPM1-211ENST00000560658 CENPBP07199 599 aaPredicted RBP26.4■■□□□ 1.82
TRPM1-211ENST00000560658 ARAP1Q96P48 1450 aa26.4■■□□□ 1.82
TRPM1-211ENST00000560658 SCAF1Q9H7N4 1312 aaKnown RBP26.37■■□□□ 1.81
TRPM1-211ENST00000560658 ACIN1Q9UKV3 1341 aaKnown RBP26.36■■□□□ 1.81
TRPM1-211ENST00000560658 DNAJC5Q9H3Z4 198 aa26.34■■□□□ 1.81
TRPM1-211ENST00000560658 HNRNPUL2Q1KMD3 747 aaKnown RBP26.3■■□□□ 1.8
TRPM1-211ENST00000560658 CADPSQ9ULU8 1353 aa26.25■■□□□ 1.79
TRPM1-211ENST00000560658 RRBP1Q9P2E9 1410 aaKnown RBP26.25■■□□□ 1.79
TRPM1-211ENST00000560658 MAP3K1Q13233 1512 aa26.23■■□□□ 1.79
TRPM1-211ENST00000560658 CUX2O14529 1486 aa26.19■■□□□ 1.78
TRPM1-211ENST00000560658 ARHGAP35Q9NRY4 1499 aa26.17■■□□□ 1.78
TRPM1-211ENST00000560658 IGF1RP08069 1367 aa26.13■■□□□ 1.77
TRPM1-211ENST00000560658 NEUROD1Q13562 356 aa26.11■■□□□ 1.77
TRPM1-211ENST00000560658 DHX57Q6P158 1386 aaKnown RBP26.08■■□□□ 1.76
TRPM1-211ENST00000560658 RANGAP1P46060 587 aaPredicted RBP26.07■■□□□ 1.76
TRPM1-211ENST00000560658 FGD5Q6ZNL6 1462 aa26.05■■□□□ 1.76
TRPM1-211ENST00000560658 CARMIL1Q5VZK9 1371 aa26.05■■□□□ 1.76
TRPM1-211ENST00000560658 CCNB3Q8WWL7 1395 aa26.05■■□□□ 1.76
TRPM1-211ENST00000560658 KANK4Q5T7N3 995 aaPredicted RBP26.03■■□□□ 1.76
TRPM1-211ENST00000560658 FHAD1B1AJZ9 1412 aa26■■□□□ 1.75
TRPM1-211ENST00000560658 TIAM1Q13009 1591 aa25.99■■□□□ 1.75
TRPM1-211ENST00000560658 DNMBPQ6XZF7 1577 aa25.96■■□□□ 1.75
TRPM1-211ENST00000560658 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
TRPM1-211ENST00000560658 ABCA10Q8WWZ4 1543 aa25.91■■□□□ 1.74
TRPM1-211ENST00000560658 EFCAB5A4FU69 1503 aa25.9■■□□□ 1.74
TRPM1-211ENST00000560658 GTF3C3Q9Y5Q9 886 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms