RNA–Protein interactions for RNA: ENST00000560407.1

NEO1-210, Transcript of neogenin 1, humanhuman

TSL 3

Gene NEO1, Length 468 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-210ENST00000560407 AEBP2Q6ZN18 517 aaPredicted RBP16.41■□□□□ 0.22
NEO1-210ENST00000560407 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
NEO1-210ENST00000560407 SENP3Q9H4L4 574 aaPredicted RBP14.12□□□□□ -0.15
NEO1-210ENST00000560407 PHF23Q9BUL5 403 aaPredicted RBP14.07□□□□□ -0.16
NEO1-210ENST00000560407 NISCHQ9Y2I1 1504 aa13.49□□□□□ -0.25
NEO1-210ENST00000560407 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
NEO1-210ENST00000560407 FOXD1Q16676 465 aa12.98□□□□□ -0.33
NEO1-210ENST00000560407 ABCC9O60706 1549 aa12.45□□□□□ -0.42
NEO1-210ENST00000560407 ADRA2BP18089 450 aa12.44□□□□□ -0.42
NEO1-210ENST00000560407 PPP6R1Q9UPN7 881 aa12.42□□□□□ -0.42
NEO1-210ENST00000560407 PIAS4Q8N2W9 510 aaPredicted RBP12.31□□□□□ -0.44
NEO1-210ENST00000560407 MSH5O43196 834 aa12.14□□□□□ -0.47
NEO1-210ENST00000560407 CCDC180Q9P1Z9 1646 aa12.12□□□□□ -0.47
NEO1-210ENST00000560407 DNAJC5BQ9UF47 199 aa11.91□□□□□ -0.5
NEO1-210ENST00000560407 RB1CC1Q8TDY2 1594 aa11.77□□□□□ -0.53
NEO1-210ENST00000560407 DCAF8L2P0C7V8 631 aa11.67□□□□□ -0.54
NEO1-210ENST00000560407 NACADO15069 1562 aa11.65□□□□□ -0.54
NEO1-210ENST00000560407 SCAF1Q9H7N4 1312 aaKnown RBP11.62□□□□□ -0.55
NEO1-210ENST00000560407 PABPN1Q86U42 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
NEO1-210ENST00000560407 PPP4R3CPQ6ZMV5 832 aa11.54□□□□□ -0.56
NEO1-210ENST00000560407 MYO15BQ96JP2 1530 aa11.44□□□□□ -0.58
NEO1-210ENST00000560407 NCBP3Q53F19 620 aaKnown RBP11.36□□□□□ -0.59
NEO1-210ENST00000560407 SHROOM4Q9ULL8 1493 aa11.33□□□□□ -0.6
NEO1-210ENST00000560407 CECR2Q9BXF3 1484 aa11.3□□□□□ -0.6
NEO1-210ENST00000560407 BICRAQ9NZM4 1560 aa11.29□□□□□ -0.6
NEO1-210ENST00000560407 CNKSR2Q8WXI2 1034 aa11.28□□□□□ -0.6
NEO1-210ENST00000560407 DNAJC5Q9H3Z4 198 aa11.28□□□□□ -0.6
NEO1-210ENST00000560407 MAPK8IP2Q13387 824 aaPredicted RBP11.27□□□□□ -0.61
NEO1-210ENST00000560407 DMRT2Q9Y5R5 561 aa11.21□□□□□ -0.61
NEO1-210ENST00000560407 UNC13AQ9UPW8 1703 aa11.18□□□□□ -0.62
NEO1-210ENST00000560407 CC2D2AQ9P2K1 1620 aa11.17□□□□□ -0.62
NEO1-210ENST00000560407 KCNA4P22459 653 aa11.17□□□□□ -0.62
NEO1-210ENST00000560407 DCAF1Q9Y4B6 1507 aa11.17□□□□□ -0.62
NEO1-210ENST00000560407 EIF4G1Q04637 1599 aaKnown RBP11.11□□□□□ -0.63
NEO1-210ENST00000560407 ZCCHC6Q5VYS8 1495 aaKnown RBP11.09□□□□□ -0.63
NEO1-210ENST00000560407 RNF216Q9NWF9 866 aaPredicted RBP11.05□□□□□ -0.64
NEO1-210ENST00000560407 SCRIBQ14160 1630 aa11.05□□□□□ -0.64
NEO1-210ENST00000560407 NPM3O75607 178 aaKnown RBP11.03□□□□□ -0.64
NEO1-210ENST00000560407 HOXD11P31277 338 aaPredicted RBP10.97□□□□□ -0.65
NEO1-210ENST00000560407 POTEDQ86YR6 584 aa10.97□□□□□ -0.65
NEO1-210ENST00000560407 CUX2O14529 1486 aa10.93□□□□□ -0.66
NEO1-210ENST00000560407 ERCC6Q03468 1493 aa10.87□□□□□ -0.67
NEO1-210ENST00000560407 NCAPD3P42695 1498 aa10.8□□□□□ -0.68
NEO1-210ENST00000560407 DCAF8L1A6NGE4 600 aa10.78□□□□□ -0.68
NEO1-210ENST00000560407 SLC4A1APQ9BWU0 796 aaKnown RBP10.72□□□□□ -0.69
NEO1-210ENST00000560407 ATAD2BQ9ULI0 1458 aa10.68□□□□□ -0.7
NEO1-210ENST00000560407 SMARCA2P51531 1590 aa10.65□□□□□ -0.7
NEO1-210ENST00000560407 TRIM41Q8WV44 630 aa10.65□□□□□ -0.7
NEO1-210ENST00000560407 PDS5BQ9NTI5 1447 aa10.61□□□□□ -0.71
NEO1-210ENST00000560407 HMGXB3Q12766 1538 aa10.61□□□□□ -0.71
NEO1-210ENST00000560407 BAZ1BQ9UIG0 1483 aaKnown RBP10.57□□□□□ -0.72
NEO1-210ENST00000560407 NESP48681 1621 aa10.56□□□□□ -0.72
NEO1-210ENST00000560407 LAMC3Q9Y6N6 1575 aa10.52□□□□□ -0.72
NEO1-210ENST00000560407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.52□□□□□ -0.73
NEO1-210ENST00000560407 BAZ1AQ9NRL2 1556 aaPredicted RBP10.51□□□□□ -0.73
NEO1-210ENST00000560407 OSCARQ8IYS5 282 aa10.5□□□□□ -0.73
NEO1-210ENST00000560407 SMARCA4P51532 1647 aa10.5□□□□□ -0.73
NEO1-210ENST00000560407 CADPSQ9ULU8 1353 aa10.49□□□□□ -0.73
NEO1-210ENST00000560407 THOC2Q8NI27 1593 aaKnown RBP10.44□□□□□ -0.74
NEO1-210ENST00000560407 PEG3Q9GZU2 1588 aa10.43□□□□□ -0.74
NEO1-210ENST00000560407 MRC2Q9UBG0 1479 aa10.42□□□□□ -0.74
NEO1-210ENST00000560407 FOXD4L1Q9NU39 408 aa10.38□□□□□ -0.75
NEO1-210ENST00000560407 SLC4A2P04920 1241 aa10.37□□□□□ -0.75
NEO1-210ENST00000560407 WDR62O43379 1518 aa10.34□□□□□ -0.75
NEO1-210ENST00000560407 CEP164Q9UPV0 1460 aa10.34□□□□□ -0.75
NEO1-210ENST00000560407 EHMT2Q96KQ7 1210 aa10.33□□□□□ -0.76
NEO1-210ENST00000560407 MROH2BQ7Z745 1585 aa10.33□□□□□ -0.76
NEO1-210ENST00000560407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.31□□□□□ -0.76
NEO1-210ENST00000560407 HNRNPUL2Q1KMD3 747 aaKnown RBP10.31□□□□□ -0.76
NEO1-210ENST00000560407 RNF39Q9H2S5 420 aa10.3□□□□□ -0.76
NEO1-210ENST00000560407 FANCD2Q9BXW9 1451 aa10.3□□□□□ -0.76
NEO1-210ENST00000560407 KIF21AQ7Z4S6 1674 aa10.29□□□□□ -0.76
NEO1-210ENST00000560407 MYCNP04198 464 aaPredicted RBP10.28□□□□□ -0.76
NEO1-210ENST00000560407 APLP2Q06481 763 aa10.26□□□□□ -0.77
NEO1-210ENST00000560407 C1QBPQ07021 282 aaKnown RBP10.26□□□□□ -0.77
NEO1-210ENST00000560407 CFTRP13569 1480 aa10.25□□□□□ -0.77
NEO1-210ENST00000560407 U3KPZ7 1027 aaPredicted RBP10.24□□□□□ -0.77
NEO1-210ENST00000560407 TRHP20396 242 aaPredicted RBP10.23□□□□□ -0.77
NEO1-210ENST00000560407 CYB5RLQ6IPT4 315 aa10.22□□□□□ -0.77
NEO1-210ENST00000560407 SAMD1Q6SPF0 538 aaPredicted RBP10.21□□□□□ -0.77
NEO1-210ENST00000560407 CSRNP3Q8WYN3 585 aa10.2□□□□□ -0.78
NEO1-210ENST00000560407 ZBTB22O15209 634 aa10.19□□□□□ -0.78
NEO1-210ENST00000560407 IFT140Q96RY7 1462 aa10.17□□□□□ -0.78
NEO1-210ENST00000560407 URB2Q14146 1524 aaKnown RBP10.15□□□□□ -0.78
NEO1-210ENST00000560407 ABCC8Q09428 1581 aa10.14□□□□□ -0.79
NEO1-210ENST00000560407 ARHGEF11O15085 1522 aa10.13□□□□□ -0.79
NEO1-210ENST00000560407 FBLN2P98095 1184 aa10.12□□□□□ -0.79
NEO1-210ENST00000560407 CACNB1Q02641 598 aaPredicted RBP10.12□□□□□ -0.79
NEO1-210ENST00000560407 WIZO95785 1651 aa10.12□□□□□ -0.79
NEO1-210ENST00000560407 RIMBP3CA6NJZ7 1639 aa10.11□□□□□ -0.79
NEO1-210ENST00000560407 RIMBP3BA6NNM3 1639 aa10.11□□□□□ -0.79
NEO1-210ENST00000560407 RIMBP3Q9UFD9 1639 aa10.11□□□□□ -0.79
NEO1-210ENST00000560407 RSF1Q96T23 1441 aaPredicted RBP10.1□□□□□ -0.79
NEO1-210ENST00000560407 ATXN8OSP0DMR3 200 aa10.08□□□□□ -0.8
NEO1-210ENST00000560407 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
NEO1-210ENST00000560407 ZNF608Q9ULD9 1512 aaPredicted RBP10.07□□□□□ -0.8
NEO1-210ENST00000560407 CHMP7Q8WUX9 453 aaPredicted RBP10.04□□□□□ -0.8
NEO1-210ENST00000560407 TOPBP1Q92547 1522 aa10.03□□□□□ -0.8
NEO1-210ENST00000560407 CAPN15O75808 1086 aa10.01□□□□□ -0.81
NEO1-210ENST00000560407 ZNF219Q9P2Y4 722 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms