RNA–Protein interactions for RNA: ENST00000559833.5

TRIP4-208, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-208ENST00000559833 AEBP2Q6ZN18 517 aaPredicted RBP28.96■■■□□ 2.23
TRIP4-208ENST00000559833 CHIC1Q5VXU3 224 aa27.15■■□□□ 1.94
TRIP4-208ENST00000559833 SENP3Q9H4L4 574 aaPredicted RBP24.66■■□□□ 1.54
TRIP4-208ENST00000559833 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
TRIP4-208ENST00000559833 FOXD1Q16676 465 aa23.07■■□□□ 1.28
TRIP4-208ENST00000559833 NISCHQ9Y2I1 1504 aa22.01■■□□□ 1.11
TRIP4-208ENST00000559833 POTEDQ86YR6 584 aa21.71■■□□□ 1.07
TRIP4-208ENST00000559833 MSH5O43196 834 aa21.64■■□□□ 1.05
TRIP4-208ENST00000559833 PLPPR3Q6T4P5 718 aa21.51■■□□□ 1.03
TRIP4-208ENST00000559833 PIAS4Q8N2W9 510 aaPredicted RBP21.42■■□□□ 1.02
TRIP4-208ENST00000559833 PPP6R1Q9UPN7 881 aa21.37■■□□□ 1.01
TRIP4-208ENST00000559833 ADRA2BP18089 450 aa21.24■□□□□ 0.99
TRIP4-208ENST00000559833 CCDC180Q9P1Z9 1646 aa19.72■□□□□ 0.75
TRIP4-208ENST00000559833 MAPK8IP2Q13387 824 aaPredicted RBP19.62■□□□□ 0.73
TRIP4-208ENST00000559833 ABCC9O60706 1549 aa19.6■□□□□ 0.73
TRIP4-208ENST00000559833 DMRT2Q9Y5R5 561 aa19.54■□□□□ 0.72
TRIP4-208ENST00000559833 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
TRIP4-208ENST00000559833 PPP4R3CPQ6ZMV5 832 aa18.83■□□□□ 0.6
TRIP4-208ENST00000559833 CACNB1Q02641 598 aaPredicted RBP18.75■□□□□ 0.59
TRIP4-208ENST00000559833 HOXD11P31277 338 aaPredicted RBP18.72■□□□□ 0.59
TRIP4-208ENST00000559833 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
TRIP4-208ENST00000559833 DCAF8L1A6NGE4 600 aa18.65■□□□□ 0.58
TRIP4-208ENST00000559833 NACADO15069 1562 aa18.64■□□□□ 0.57
TRIP4-208ENST00000559833 CNKSR2Q8WXI2 1034 aa18.54■□□□□ 0.56
TRIP4-208ENST00000559833 RNF39Q9H2S5 420 aa18.49■□□□□ 0.55
TRIP4-208ENST00000559833 MYO15BQ96JP2 1530 aa18.46■□□□□ 0.55
TRIP4-208ENST00000559833 RNF216Q9NWF9 866 aaPredicted RBP18.46■□□□□ 0.55
TRIP4-208ENST00000559833 DCAF8L2P0C7V8 631 aa18.44■□□□□ 0.54
TRIP4-208ENST00000559833 DNAJC5BQ9UF47 199 aa18.44■□□□□ 0.54
TRIP4-208ENST00000559833 UNC13AQ9UPW8 1703 aa18.32■□□□□ 0.52
TRIP4-208ENST00000559833 PABPN1Q86U42 306 aaKnown RBP eCLIP18.27■□□□□ 0.52
TRIP4-208ENST00000559833 ZCCHC6Q5VYS8 1495 aaKnown RBP18.25■□□□□ 0.51
TRIP4-208ENST00000559833 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
TRIP4-208ENST00000559833 BICRAQ9NZM4 1560 aa18.23■□□□□ 0.51
TRIP4-208ENST00000559833 C1QBPQ07021 282 aaKnown RBP18.17■□□□□ 0.5
TRIP4-208ENST00000559833 SHROOM4Q9ULL8 1493 aa17.98■□□□□ 0.47
TRIP4-208ENST00000559833 NCBP3Q53F19 620 aaKnown RBP17.95■□□□□ 0.46
TRIP4-208ENST00000559833 SCRIBQ14160 1630 aa17.89■□□□□ 0.45
TRIP4-208ENST00000559833 NPM3O75607 178 aaKnown RBP17.77■□□□□ 0.44
TRIP4-208ENST00000559833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.435e-7■□□□□ 9.5
TRIP4-208ENST00000559833 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
TRIP4-208ENST00000559833 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
TRIP4-208ENST00000559833 CECR2Q9BXF3 1484 aa17.67■□□□□ 0.42
TRIP4-208ENST00000559833 U3KPZ7 1027 aaPredicted RBP17.42■□□□□ 0.38
TRIP4-208ENST00000559833 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
TRIP4-208ENST00000559833 NCAPD3P42695 1498 aa17.24■□□□□ 0.35
TRIP4-208ENST00000559833 DSG3P32926 999 aa17.21■□□□□ 0.35
TRIP4-208ENST00000559833 CAPN15O75808 1086 aa17.16■□□□□ 0.34
TRIP4-208ENST00000559833 KCNA4P22459 653 aa17.16■□□□□ 0.34
TRIP4-208ENST00000559833 ATAD2BQ9ULI0 1458 aa17.16■□□□□ 0.34
TRIP4-208ENST00000559833 SMARCA4P51532 1647 aa17.14■□□□□ 0.33
TRIP4-208ENST00000559833 SLC4A2P04920 1241 aa17.09■□□□□ 0.33
TRIP4-208ENST00000559833 SMARCA2P51531 1590 aa17.08■□□□□ 0.32
TRIP4-208ENST00000559833 HMGXB3Q12766 1538 aa17.07■□□□□ 0.32
TRIP4-208ENST00000559833 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
TRIP4-208ENST00000559833 PEG3Q9GZU2 1588 aa17.03■□□□□ 0.32
TRIP4-208ENST00000559833 DNAJC5Q9H3Z4 198 aa17.01■□□□□ 0.31
TRIP4-208ENST00000559833 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
TRIP4-208ENST00000559833 BAZ1BQ9UIG0 1483 aaKnown RBP16.94■□□□□ 0.3
TRIP4-208ENST00000559833 POTEHQ6S545 545 aa16.92■□□□□ 0.3
TRIP4-208ENST00000559833 CUX2O14529 1486 aa16.91■□□□□ 0.3
TRIP4-208ENST00000559833 NESP48681 1621 aa16.88■□□□□ 0.29
TRIP4-208ENST00000559833 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
TRIP4-208ENST00000559833 TRHP20396 242 aaPredicted RBP16.83■□□□□ 0.28
TRIP4-208ENST00000559833 LAMC3Q9Y6N6 1575 aa16.8■□□□□ 0.28
TRIP4-208ENST00000559833 ABCB7O75027 752 aa16.78■□□□□ 0.28
TRIP4-208ENST00000559833 APLP2Q06481 763 aa16.78■□□□□ 0.28
TRIP4-208ENST00000559833 ZNF219Q9P2Y4 722 aaPredicted RBP16.78■□□□□ 0.28
TRIP4-208ENST00000559833 WIZO95785 1651 aa16.73■□□□□ 0.27
TRIP4-208ENST00000559833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
TRIP4-208ENST00000559833 HNRNPUL2Q1KMD3 747 aaKnown RBP16.72■□□□□ 0.27
TRIP4-208ENST00000559833 THOC2Q8NI27 1593 aaKnown RBP16.72■□□□□ 0.27
TRIP4-208ENST00000559833 CADPSQ9ULU8 1353 aa16.68■□□□□ 0.26
TRIP4-208ENST00000559833 PDS5BQ9NTI5 1447 aa16.68■□□□□ 0.26
TRIP4-208ENST00000559833 KIF21AQ7Z4S6 1674 aa16.66■□□□□ 0.26
TRIP4-208ENST00000559833 RSF1Q96T23 1441 aaPredicted RBP16.64■□□□□ 0.25
TRIP4-208ENST00000559833 SAMD1Q6SPF0 538 aaPredicted RBP16.63■□□□□ 0.25
TRIP4-208ENST00000559833 TOP2AP11388 1531 aaKnown RBP16.52■□□□□ 0.24
TRIP4-208ENST00000559833 CFTRP13569 1480 aa16.52■□□□□ 0.23
TRIP4-208ENST00000559833 MRC2Q9UBG0 1479 aa16.52■□□□□ 0.23
TRIP4-208ENST00000559833 WDR62O43379 1518 aa16.5■□□□□ 0.23
TRIP4-208ENST00000559833 FANCD2Q9BXW9 1451 aa16.46■□□□□ 0.23
TRIP4-208ENST00000559833 CEP164Q9UPV0 1460 aa16.45■□□□□ 0.22
TRIP4-208ENST00000559833 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
TRIP4-208ENST00000559833 CCDC88BA6NC98 1476 aa16.36■□□□□ 0.21
TRIP4-208ENST00000559833 RBM42Q9BTD8 480 aaKnown RBP16.36■□□□□ 0.21
TRIP4-208ENST00000559833 URB2Q14146 1524 aaKnown RBP16.35■□□□□ 0.21
TRIP4-208ENST00000559833 POLA2Q14181 598 aa16.33■□□□□ 0.2
TRIP4-208ENST00000559833 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
TRIP4-208ENST00000559833 TOPBP1Q92547 1522 aa16.16■□□□□ 0.18
TRIP4-208ENST00000559833 CHRDL2Q6WN34 429 aa16.16■□□□□ 0.18
TRIP4-208ENST00000559833 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
TRIP4-208ENST00000559833 OSCARQ8IYS5 282 aa16.15■□□□□ 0.18
TRIP4-208ENST00000559833 IFT140Q96RY7 1462 aa16.14■□□□□ 0.17
TRIP4-208ENST00000559833 ATF5Q9Y2D1 282 aaPredicted RBP16.12■□□□□ 0.17
TRIP4-208ENST00000559833 ZNF608Q9ULD9 1512 aaPredicted RBP16.11■□□□□ 0.17
TRIP4-208ENST00000559833 DNMBPQ6XZF7 1577 aa16.1■□□□□ 0.17
TRIP4-208ENST00000559833 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
TRIP4-208ENST00000559833 FOXD4L1Q9NU39 408 aa16.08■□□□□ 0.16
TRIP4-208ENST00000559833 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms