RNA–Protein interactions for RNA: ENST00000559743.1

EXD1-205, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 4

Gene EXD1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-205ENST00000559743 AEBP2Q6ZN18 517 aaPredicted RBP14.8□□□□□ -0.04
EXD1-205ENST00000559743 CHIC1Q5VXU3 224 aa14.62□□□□□ -0.07
EXD1-205ENST00000559743 NISCHQ9Y2I1 1504 aa12.87□□□□□ -0.35
EXD1-205ENST00000559743 PHF23Q9BUL5 403 aaPredicted RBP12.8□□□□□ -0.36
EXD1-205ENST00000559743 SENP3Q9H4L4 574 aaPredicted RBP12.63□□□□□ -0.39
EXD1-205ENST00000559743 PLPPR3Q6T4P5 718 aa11.91□□□□□ -0.5
EXD1-205ENST00000559743 FOXD1Q16676 465 aa11.64□□□□□ -0.55
EXD1-205ENST00000559743 ABCC9O60706 1549 aa11.55□□□□□ -0.56
EXD1-205ENST00000559743 CCDC180Q9P1Z9 1646 aa11.53□□□□□ -0.56
EXD1-205ENST00000559743 PPP6R1Q9UPN7 881 aa11.23□□□□□ -0.61
EXD1-205ENST00000559743 ADRA2BP18089 450 aa11.2□□□□□ -0.62
EXD1-205ENST00000559743 RB1CC1Q8TDY2 1594 aa11.02□□□□□ -0.65
EXD1-205ENST00000559743 PIAS4Q8N2W9 510 aaPredicted RBP10.99□□□□□ -0.65
EXD1-205ENST00000559743 DCAF8L2P0C7V8 631 aa10.96□□□□□ -0.65
EXD1-205ENST00000559743 NACADO15069 1562 aa10.94□□□□□ -0.66
EXD1-205ENST00000559743 DNAJC5BQ9UF47 199 aa10.85□□□□□ -0.67
EXD1-205ENST00000559743 MYO15BQ96JP2 1530 aa10.8□□□□□ -0.68
EXD1-205ENST00000559743 MSH5O43196 834 aa10.78□□□□□ -0.68
EXD1-205ENST00000559743 PABPN1Q86U42 306 aaKnown RBP eCLIP10.78□□□□□ -0.68
EXD1-205ENST00000559743 UNC13AQ9UPW8 1703 aa10.67□□□□□ -0.7
EXD1-205ENST00000559743 DCAF1Q9Y4B6 1507 aa10.64□□□□□ -0.71
EXD1-205ENST00000559743 ZCCHC6Q5VYS8 1495 aaKnown RBP10.63□□□□□ -0.71
EXD1-205ENST00000559743 BICRAQ9NZM4 1560 aa10.63□□□□□ -0.71
EXD1-205ENST00000559743 SHROOM4Q9ULL8 1493 aa10.56□□□□□ -0.72
EXD1-205ENST00000559743 SCRIBQ14160 1630 aa10.47□□□□□ -0.73
EXD1-205ENST00000559743 PPP4R3CPQ6ZMV5 832 aa10.45□□□□□ -0.74
EXD1-205ENST00000559743 CECR2Q9BXF3 1484 aa10.42□□□□□ -0.74
EXD1-205ENST00000559743 CC2D2AQ9P2K1 1620 aa10.41□□□□□ -0.74
EXD1-205ENST00000559743 EIF4G1Q04637 1599 aaKnown RBP10.4□□□□□ -0.74
EXD1-205ENST00000559743 SCAF1Q9H7N4 1312 aaKnown RBP10.36□□□□□ -0.75
EXD1-205ENST00000559743 KCNA4P22459 653 aa10.28□□□□□ -0.76
EXD1-205ENST00000559743 NCBP3Q53F19 620 aaKnown RBP10.26□□□□□ -0.77
EXD1-205ENST00000559743 CNKSR2Q8WXI2 1034 aa10.19□□□□□ -0.78
EXD1-205ENST00000559743 NCAPD3P42695 1498 aa10.1□□□□□ -0.79
EXD1-205ENST00000559743 MAPK8IP2Q13387 824 aaPredicted RBP10.1□□□□□ -0.79
EXD1-205ENST00000559743 DMRT2Q9Y5R5 561 aa10.1□□□□□ -0.79
EXD1-205ENST00000559743 NPM3O75607 178 aaKnown RBP10.06□□□□□ -0.8
EXD1-205ENST00000559743 ATAD2BQ9ULI0 1458 aa10.05□□□□□ -0.8
EXD1-205ENST00000559743 SMARCA2P51531 1590 aa10.05□□□□□ -0.8
EXD1-205ENST00000559743 DNAJC5Q9H3Z4 198 aa10.04□□□□□ -0.8
EXD1-205ENST00000559743 ERCC6Q03468 1493 aa10.02□□□□□ -0.81
EXD1-205ENST00000559743 SMARCA4P51532 1647 aa10□□□□□ -0.81
EXD1-205ENST00000559743 HMGXB3Q12766 1538 aa10□□□□□ -0.81
EXD1-205ENST00000559743 BAZ1AQ9NRL2 1556 aaPredicted RBP10□□□□□ -0.81
EXD1-205ENST00000559743 CUX2O14529 1486 aa9.99□□□□□ -0.81
EXD1-205ENST00000559743 RNF216Q9NWF9 866 aaPredicted RBP9.99□□□□□ -0.81
EXD1-205ENST00000559743 BAZ1BQ9UIG0 1483 aaKnown RBP9.97□□□□□ -0.81
EXD1-205ENST00000559743 HOXD11P31277 338 aaPredicted RBP9.94□□□□□ -0.82
EXD1-205ENST00000559743 PEG3Q9GZU2 1588 aa9.92□□□□□ -0.82
EXD1-205ENST00000559743 NESP48681 1621 aa9.89□□□□□ -0.83
EXD1-205ENST00000559743 MROH2BQ7Z745 1585 aa9.88□□□□□ -0.83
EXD1-205ENST00000559743 LAMC3Q9Y6N6 1575 aa9.88□□□□□ -0.83
EXD1-205ENST00000559743 PDS5BQ9NTI5 1447 aa9.87□□□□□ -0.83
EXD1-205ENST00000559743 SLC4A1APQ9BWU0 796 aaKnown RBP9.82□□□□□ -0.84
EXD1-205ENST00000559743 CADPSQ9ULU8 1353 aa9.82□□□□□ -0.84
EXD1-205ENST00000559743 THOC2Q8NI27 1593 aaKnown RBP9.76□□□□□ -0.85
EXD1-205ENST00000559743 WIZO95785 1651 aa9.75□□□□□ -0.85
EXD1-205ENST00000559743 KIF21AQ7Z4S6 1674 aa9.74□□□□□ -0.85
EXD1-205ENST00000559743 MRC2Q9UBG0 1479 aa9.72□□□□□ -0.85
EXD1-205ENST00000559743 RSF1Q96T23 1441 aaPredicted RBP9.71□□□□□ -0.86
EXD1-205ENST00000559743 CEP164Q9UPV0 1460 aa9.69□□□□□ -0.86
EXD1-205ENST00000559743 CFTRP13569 1480 aa9.67□□□□□ -0.86
EXD1-205ENST00000559743 FANCD2Q9BXW9 1451 aa9.67□□□□□ -0.86
EXD1-205ENST00000559743 WDR62O43379 1518 aa9.66□□□□□ -0.86
EXD1-205ENST00000559743 TOP2AP11388 1531 aaKnown RBP9.66□□□□□ -0.86
EXD1-205ENST00000559743 OSCARQ8IYS5 282 aa9.61□□□□□ -0.87
EXD1-205ENST00000559743 TRIM41Q8WV44 630 aa9.59□□□□□ -0.87
EXD1-205ENST00000559743 POTEDQ86YR6 584 aa9.58□□□□□ -0.88
EXD1-205ENST00000559743 CCDC88BA6NC98 1476 aa9.57□□□□□ -0.88
EXD1-205ENST00000559743 URB2Q14146 1524 aaKnown RBP9.56□□□□□ -0.88
EXD1-205ENST00000559743 EHMT2Q96KQ7 1210 aa9.54□□□□□ -0.88
EXD1-205ENST00000559743 ABCC8Q09428 1581 aa9.54□□□□□ -0.88
EXD1-205ENST00000559743 IFT140Q96RY7 1462 aa9.52□□□□□ -0.89
EXD1-205ENST00000559743 PRDM2Q13029 1718 aa9.51□□□□□ -0.89
EXD1-205ENST00000559743 FOXD4L1Q9NU39 408 aa9.51□□□□□ -0.89
EXD1-205ENST00000559743 CSRNP3Q8WYN3 585 aa9.49□□□□□ -0.89
EXD1-205ENST00000559743 DCAF8L1A6NGE4 600 aa9.48□□□□□ -0.89
EXD1-205ENST00000559743 SLC4A2P04920 1241 aa9.48□□□□□ -0.89
EXD1-205ENST00000559743 TOPBP1Q92547 1522 aa9.47□□□□□ -0.89
EXD1-205ENST00000559743 ZBTB22O15209 634 aa9.47□□□□□ -0.89
EXD1-205ENST00000559743 ZNF608Q9ULD9 1512 aaPredicted RBP9.44□□□□□ -0.9
EXD1-205ENST00000559743 DNMBPQ6XZF7 1577 aa9.44□□□□□ -0.9
EXD1-205ENST00000559743 FBLN2P98095 1184 aa9.41□□□□□ -0.9
EXD1-205ENST00000559743 AQRO60306 1485 aaKnown RBP eCLIP9.39□□□□□ -0.91
EXD1-205ENST00000559743 SOGA1O94964 1423 aa9.39□□□□□ -0.91
EXD1-205ENST00000559743 EIF4G3O43432 1585 aaKnown RBP9.37□□□□□ -0.91
EXD1-205ENST00000559743 POLA1P09884 1462 aaPredicted RBP9.37□□□□□ -0.91
EXD1-205ENST00000559743 RIMBP3CA6NJZ7 1639 aa9.37□□□□□ -0.91
EXD1-205ENST00000559743 RIMBP3BA6NNM3 1639 aa9.37□□□□□ -0.91
EXD1-205ENST00000559743 TARBP1Q13395 1621 aaKnown RBP9.37□□□□□ -0.91
EXD1-205ENST00000559743 RIMBP3Q9UFD9 1639 aa9.37□□□□□ -0.91
EXD1-205ENST00000559743 CYB5RLQ6IPT4 315 aa9.36□□□□□ -0.91
EXD1-205ENST00000559743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.36□□□□□ -0.91
EXD1-205ENST00000559743 MYCNP04198 464 aaPredicted RBP9.35□□□□□ -0.91
EXD1-205ENST00000559743 CHMP7Q8WUX9 453 aaPredicted RBP9.35□□□□□ -0.91
EXD1-205ENST00000559743 ARHGEF11O15085 1522 aa9.35□□□□□ -0.91
EXD1-205ENST00000559743 TDRD9Q8NDG6 1382 aaKnown RBP9.35□□□□□ -0.91
EXD1-205ENST00000559743 RAD54L2Q9Y4B4 1467 aa9.34□□□□□ -0.91
EXD1-205ENST00000559743 SUPT5HO00267 1087 aaKnown RBP9.33□□□□□ -0.92
EXD1-205ENST00000559743 WDR97A6NE52 1622 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms