RNA–Protein interactions for RNA: ENST00000559323.5

MRPS11-207, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 2

Gene MRPS11, Length 2,002 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-207ENST00000559323 NISCHQ9Y2I1 1504 aa26.19■■□□□ 1.78
MRPS11-207ENST00000559323 CCDC180Q9P1Z9 1646 aa22.31■■□□□ 1.16
MRPS11-207ENST00000559323 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
MRPS11-207ENST00000559323 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
MRPS11-207ENST00000559323 SUPT5HO00267 1087 aaKnown RBP21.99■■□□□ 1.11
MRPS11-207ENST00000559323 DCAF1Q9Y4B6 1507 aa21.69■■□□□ 1.06
MRPS11-207ENST00000559323 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
MRPS11-207ENST00000559323 HRCP23327 699 aa21.49■■□□□ 1.03
MRPS11-207ENST00000559323 MYO15BQ96JP2 1530 aa21.43■■□□□ 1.02
MRPS11-207ENST00000559323 DCAF8L2P0C7V8 631 aa21.39■■□□□ 1.01
MRPS11-207ENST00000559323 ABCC9O60706 1549 aa21.24■□□□□ 0.99
MRPS11-207ENST00000559323 PCGF6Q9BYE7 350 aa21.16■□□□□ 0.98
MRPS11-207ENST00000559323 TRIM26Q12899 539 aaPredicted RBP20.92■□□□□ 0.94
MRPS11-207ENST00000559323 LOC105371045A0A1W2PR82 267 aa20.82■□□□□ 0.92
MRPS11-207ENST00000559323 ZEB1P37275 1124 aaPredicted RBP20.78■□□□□ 0.92
MRPS11-207ENST00000559323 RSF1Q96T23 1441 aaPredicted RBP20.77■□□□□ 0.91
MRPS11-207ENST00000559323 NACADO15069 1562 aa20.72■□□□□ 0.91
MRPS11-207ENST00000559323 RB1CC1Q8TDY2 1594 aa20.7■□□□□ 0.9
MRPS11-207ENST00000559323 PPARGC1BQ86YN6 1023 aaKnown RBP20.67■□□□□ 0.9
MRPS11-207ENST00000559323 SCRIBQ14160 1630 aa20.66■□□□□ 0.9
MRPS11-207ENST00000559323 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
MRPS11-207ENST00000559323 MROH2BQ7Z745 1585 aa20.26■□□□□ 0.83
MRPS11-207ENST00000559323 PELP1Q8IZL8 1130 aaKnown RBP20.26■□□□□ 0.83
MRPS11-207ENST00000559323 FAM9AQ8IZU1 332 aaPredicted RBP20.23■□□□□ 0.83
MRPS11-207ENST00000559323 CECR2Q9BXF3 1484 aa20.22■□□□□ 0.83
MRPS11-207ENST00000559323 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
MRPS11-207ENST00000559323 UNC13AQ9UPW8 1703 aa20.17■□□□□ 0.82
MRPS11-207ENST00000559323 WIZO95785 1651 aa20.16■□□□□ 0.82
MRPS11-207ENST00000559323 EIF4G1Q04637 1599 aaKnown RBP20.07■□□□□ 0.8
MRPS11-207ENST00000559323 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.8
MRPS11-207ENST00000559323 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
MRPS11-207ENST00000559323 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
MRPS11-207ENST00000559323 WRNQ14191 1432 aaPredicted RBP eCLIP19.98■□□□□ 0.79
MRPS11-207ENST00000559323 EEA1Q15075 1411 aa19.94■□□□□ 0.78
MRPS11-207ENST00000559323 CCER1Q8TC90 406 aaPredicted RBP19.91■□□□□ 0.78
MRPS11-207ENST00000559323 SMARCA4P51532 1647 aa19.89■□□□□ 0.77
MRPS11-207ENST00000559323 EHMT2Q96KQ7 1210 aa19.88■□□□□ 0.77
MRPS11-207ENST00000559323 TNIKQ9UKE5 1360 aa19.84■□□□□ 0.77
MRPS11-207ENST00000559323 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
MRPS11-207ENST00000559323 SMARCA2P51531 1590 aa19.82■□□□□ 0.76
MRPS11-207ENST00000559323 CCDC88BA6NC98 1476 aa19.82■□□□□ 0.76
MRPS11-207ENST00000559323 CEP162Q5TB80 1403 aa19.79■□□□□ 0.76
MRPS11-207ENST00000559323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.78■□□□□ 0.76
MRPS11-207ENST00000559323 CENPBP07199 599 aaPredicted RBP19.75■□□□□ 0.75
MRPS11-207ENST00000559323 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
MRPS11-207ENST00000559323 ACIN1Q9UKV3 1341 aaKnown RBP19.72■□□□□ 0.75
MRPS11-207ENST00000559323 CSRNP3Q8WYN3 585 aa19.71■□□□□ 0.75
MRPS11-207ENST00000559323 DIEXFQ68CQ4 756 aaKnown RBP19.68■□□□□ 0.74
MRPS11-207ENST00000559323 GOLGA3Q08378 1498 aa19.67■□□□□ 0.74
MRPS11-207ENST00000559323 SOGA1O94964 1423 aa19.63■□□□□ 0.73
MRPS11-207ENST00000559323 PEG3Q9GZU2 1588 aa19.6■□□□□ 0.73
MRPS11-207ENST00000559323 UBTFP17480 764 aaKnown RBP19.59■□□□□ 0.73
MRPS11-207ENST00000559323 CEP164Q9UPV0 1460 aa19.56■□□□□ 0.72
MRPS11-207ENST00000559323 KIF21BO75037 1637 aa19.54■□□□□ 0.72
MRPS11-207ENST00000559323 ZNF316A6NFI3 1004 aaPredicted RBP19.52■□□□□ 0.72
MRPS11-207ENST00000559323 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
MRPS11-207ENST00000559323 BAZ1BQ9UIG0 1483 aaKnown RBP19.48■□□□□ 0.71
MRPS11-207ENST00000559323 MYT1Q01538 1121 aa19.46■□□□□ 0.71
MRPS11-207ENST00000559323 RUSC2Q8N2Y8 1516 aa19.45■□□□□ 0.7
MRPS11-207ENST00000559323 GTF3C3Q9Y5Q9 886 aa19.41■□□□□ 0.7
MRPS11-207ENST00000559323 CLIP1P30622 1438 aa19.4■□□□□ 0.7
MRPS11-207ENST00000559323 APLP2Q06481 763 aa19.39■□□□□ 0.69
MRPS11-207ENST00000559323 VPS8Q8N3P4 1428 aa19.39■□□□□ 0.69
MRPS11-207ENST00000559323 TTBK1Q5TCY1 1321 aaPredicted RBP19.36■□□□□ 0.69
MRPS11-207ENST00000559323 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
MRPS11-207ENST00000559323 CLSPNQ9HAW4 1339 aa19.32■□□□□ 0.68
MRPS11-207ENST00000559323 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
MRPS11-207ENST00000559323 TOP2BQ02880 1626 aa19.23■□□□□ 0.67
MRPS11-207ENST00000559323 ERICH3Q5RHP9 1530 aa19.22■□□□□ 0.67
MRPS11-207ENST00000559323 HNRNPUL2Q1KMD3 747 aaKnown RBP19.2■□□□□ 0.66
MRPS11-207ENST00000559323 CC2D2AQ9P2K1 1620 aa19.19■□□□□ 0.66
MRPS11-207ENST00000559323 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
MRPS11-207ENST00000559323 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
MRPS11-207ENST00000559323 NCAPD3P42695 1498 aa19.15■□□□□ 0.66
MRPS11-207ENST00000559323 MIER1Q8N108 512 aa19.1■□□□□ 0.65
MRPS11-207ENST00000559323 HMGXB3Q12766 1538 aa19.09■□□□□ 0.65
MRPS11-207ENST00000559323 PRXQ9BXM0 1461 aa19.09■□□□□ 0.65
MRPS11-207ENST00000559323 YTHDC1Q96MU7 727 aaKnown RBP19.03■□□□□ 0.64
MRPS11-207ENST00000559323 DHX57Q6P158 1386 aaKnown RBP18.99■□□□□ 0.63
MRPS11-207ENST00000559323 KIF27Q86VH2 1401 aa18.99■□□□□ 0.63
MRPS11-207ENST00000559323 RRBP1Q9P2E9 1410 aaKnown RBP18.99■□□□□ 0.63
MRPS11-207ENST00000559323 ARAP1Q96P48 1450 aa18.98■□□□□ 0.63
MRPS11-207ENST00000559323 CUX2O14529 1486 aa18.97■□□□□ 0.63
MRPS11-207ENST00000559323 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
MRPS11-207ENST00000559323 MAP3K1Q13233 1512 aa18.88■□□□□ 0.61
MRPS11-207ENST00000559323 CCNB3Q8WWL7 1395 aa18.86■□□□□ 0.61
MRPS11-207ENST00000559323 RANGAP1P46060 587 aaPredicted RBP18.86■□□□□ 0.61
MRPS11-207ENST00000559323 CUX1P39880 1505 aa18.86■□□□□ 0.61
MRPS11-207ENST00000559323 CFTRP13569 1480 aa18.84■□□□□ 0.61
MRPS11-207ENST00000559323 KANK4Q5T7N3 995 aaPredicted RBP18.82■□□□□ 0.6
MRPS11-207ENST00000559323 PRDM2Q13029 1718 aa18.82■□□□□ 0.6
MRPS11-207ENST00000559323 ARHGAP35Q9NRY4 1499 aa18.79■□□□□ 0.6
MRPS11-207ENST00000559323 TIMELESSQ9UNS1 1208 aa18.74■□□□□ 0.59
MRPS11-207ENST00000559323 TIAM1Q13009 1591 aa18.72■□□□□ 0.59
MRPS11-207ENST00000559323 FHAD1B1AJZ9 1412 aa18.7■□□□□ 0.58
MRPS11-207ENST00000559323 SETD5Q9C0A6 1442 aa18.67■□□□□ 0.58
MRPS11-207ENST00000559323 SUPT16HQ9Y5B9 1047 aaKnown RBP18.67■□□□□ 0.58
MRPS11-207ENST00000559323 IGF1RP08069 1367 aa18.66■□□□□ 0.58
MRPS11-207ENST00000559323 RAB3GAP2Q9H2M9 1393 aa18.66■□□□□ 0.58
MRPS11-207ENST00000559323 CADPSQ9ULU8 1353 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms