RNA–Protein interactions for RNA: ENST00000559149.5

LINS1-202, Transcript of lines homolog 1, humanhuman

TSL 2

Gene LINS1, Length 2,477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-202ENST00000559149 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
LINS1-202ENST00000559149 AEBP2Q6ZN18 517 aaPredicted RBP16.54■□□□□ 0.24
LINS1-202ENST00000559149 NISCHQ9Y2I1 1504 aa16.09■□□□□ 0.17
LINS1-202ENST00000559149 PHF23Q9BUL5 403 aaPredicted RBP15.17■□□□□ 0.02
LINS1-202ENST00000559149 CCDC180Q9P1Z9 1646 aa14.13□□□□□ -0.15
LINS1-202ENST00000559149 PLPPR3Q6T4P5 718 aa14.07□□□□□ -0.16
LINS1-202ENST00000559149 EHMT2Q96KQ7 1210 aa14.05□□□□□ -0.16
LINS1-202ENST00000559149 ABCC9O60706 1549 aa13.7□□□□□ -0.22
LINS1-202ENST00000559149 KCNA4P22459 653 aa13.67□□□□□ -0.22
LINS1-202ENST00000559149 SENP3Q9H4L4 574 aaPredicted RBP13.53□□□□□ -0.24
LINS1-202ENST00000559149 ADRA2BP18089 450 aa13.51□□□□□ -0.25
LINS1-202ENST00000559149 ZCCHC6Q5VYS8 1495 aaKnown RBP13.46□□□□□ -0.25
LINS1-202ENST00000559149 DCAF8L2P0C7V8 631 aa13.4□□□□□ -0.26
LINS1-202ENST00000559149 CSRNP3Q8WYN3 585 aa13.34□□□□□ -0.27
LINS1-202ENST00000559149 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
LINS1-202ENST00000559149 NACADO15069 1562 aa13.2□□□□□ -0.3
LINS1-202ENST00000559149 RB1CC1Q8TDY2 1594 aa13.17□□□□□ -0.3
LINS1-202ENST00000559149 MYO15BQ96JP2 1530 aa13.16□□□□□ -0.3
LINS1-202ENST00000559149 PPP6R1Q9UPN7 881 aa13.12□□□□□ -0.31
LINS1-202ENST00000559149 SLC24A1O60721 1099 aa13.11□□□□□ -0.31
LINS1-202ENST00000559149 SCRIBQ14160 1630 aa13.04□□□□□ -0.32
LINS1-202ENST00000559149 UNC13AQ9UPW8 1703 aa13.04□□□□□ -0.32
LINS1-202ENST00000559149 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.32
LINS1-202ENST00000559149 SHROOM4Q9ULL8 1493 aa13.02□□□□□ -0.33
LINS1-202ENST00000559149 BICRAQ9NZM4 1560 aa12.88□□□□□ -0.35
LINS1-202ENST00000559149 PABPN1Q86U42 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINS1-202ENST00000559149 RTN4Q9NQC3 1192 aaKnown RBP12.82□□□□□ -0.36
LINS1-202ENST00000559149 ZBTB22O15209 634 aa12.7□□□□□ -0.38
LINS1-202ENST00000559149 FOXD1Q16676 465 aa12.66□□□□□ -0.38
LINS1-202ENST00000559149 PPP4R3CPQ6ZMV5 832 aa12.62□□□□□ -0.39
LINS1-202ENST00000559149 CECR2Q9BXF3 1484 aa12.6□□□□□ -0.39
LINS1-202ENST00000559149 NPM3O75607 178 aaKnown RBP12.48□□□□□ -0.41
LINS1-202ENST00000559149 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
LINS1-202ENST00000559149 EIF4G1Q04637 1599 aaKnown RBP12.47□□□□□ -0.41
LINS1-202ENST00000559149 MROH2BQ7Z745 1585 aa12.47□□□□□ -0.41
LINS1-202ENST00000559149 SMARCA4P51532 1647 aa12.45□□□□□ -0.42
LINS1-202ENST00000559149 BAZ1AQ9NRL2 1556 aaPredicted RBP12.41□□□□□ -0.42
LINS1-202ENST00000559149 DNAJC5BQ9UF47 199 aa12.4□□□□□ -0.42
LINS1-202ENST00000559149 RSF1Q96T23 1441 aaPredicted RBP12.39□□□□□ -0.43
LINS1-202ENST00000559149 CC2D2AQ9P2K1 1620 aa12.38□□□□□ -0.43
LINS1-202ENST00000559149 WIZO95785 1651 aa12.37□□□□□ -0.43
LINS1-202ENST00000559149 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
LINS1-202ENST00000559149 SUPT5HO00267 1087 aaKnown RBP12.33□□□□□ -0.44
LINS1-202ENST00000559149 ATAD2BQ9ULI0 1458 aa12.3□□□□□ -0.44
LINS1-202ENST00000559149 PEG3Q9GZU2 1588 aa12.26□□□□□ -0.45
LINS1-202ENST00000559149 SMARCA2P51531 1590 aa12.23□□□□□ -0.45
LINS1-202ENST00000559149 NCAPD3P42695 1498 aa12.21□□□□□ -0.46
LINS1-202ENST00000559149 BAZ1BQ9UIG0 1483 aaKnown RBP12.19□□□□□ -0.46
LINS1-202ENST00000559149 HMGXB3Q12766 1538 aa12.16□□□□□ -0.46
LINS1-202ENST00000559149 TOP2AP11388 1531 aaKnown RBP12.16□□□□□ -0.46
LINS1-202ENST00000559149 PIAS4Q8N2W9 510 aaPredicted RBP12.14□□□□□ -0.47
LINS1-202ENST00000559149 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
LINS1-202ENST00000559149 CCDC88BA6NC98 1476 aa12.06□□□□□ -0.48
LINS1-202ENST00000559149 NESP48681 1621 aa11.97□□□□□ -0.49
LINS1-202ENST00000559149 FKBP8Q14318 412 aa11.95□□□□□ -0.5
LINS1-202ENST00000559149 CNKSR2Q8WXI2 1034 aa11.94□□□□□ -0.5
LINS1-202ENST00000559149 CADPSQ9ULU8 1353 aa11.88□□□□□ -0.51
LINS1-202ENST00000559149 CFTRP13569 1480 aa11.87□□□□□ -0.51
LINS1-202ENST00000559149 LAMC3Q9Y6N6 1575 aa11.84□□□□□ -0.51
LINS1-202ENST00000559149 PRDM2Q13029 1718 aa11.82□□□□□ -0.52
LINS1-202ENST00000559149 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
LINS1-202ENST00000559149 ABCC8Q09428 1581 aa11.77□□□□□ -0.52
LINS1-202ENST00000559149 FANCD2Q9BXW9 1451 aa11.77□□□□□ -0.53
LINS1-202ENST00000559149 PRKCSHP14314 528 aaPredicted RBP11.77□□□□□ -0.53
LINS1-202ENST00000559149 PDS5BQ9NTI5 1447 aa11.72□□□□□ -0.53
LINS1-202ENST00000559149 ERCC6Q03468 1493 aa11.71□□□□□ -0.54
LINS1-202ENST00000559149 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
LINS1-202ENST00000559149 URB2Q14146 1524 aaKnown RBP11.68□□□□□ -0.54
LINS1-202ENST00000559149 SYNJ1O43426 1573 aa11.67□□□□□ -0.54
LINS1-202ENST00000559149 THOC2Q8NI27 1593 aaKnown RBP11.67□□□□□ -0.54
LINS1-202ENST00000559149 CUX1P39880 1505 aa11.67□□□□□ -0.54
LINS1-202ENST00000559149 MAPK8IP2Q13387 824 aaPredicted RBP11.65□□□□□ -0.54
LINS1-202ENST00000559149 WRNQ14191 1432 aaPredicted RBP eCLIP11.64□□□□□ -0.551e-6■■■■■ 58.5
LINS1-202ENST00000559149 MRC2Q9UBG0 1479 aa11.63□□□□□ -0.55
LINS1-202ENST00000559149 TOPBP1Q92547 1522 aa11.62□□□□□ -0.55
LINS1-202ENST00000559149 DNMBPQ6XZF7 1577 aa11.6□□□□□ -0.55
LINS1-202ENST00000559149 SLC4A2P04920 1241 aa11.6□□□□□ -0.55
LINS1-202ENST00000559149 WDR62O43379 1518 aa11.59□□□□□ -0.55
LINS1-202ENST00000559149 TOP2BQ02880 1626 aa11.59□□□□□ -0.55
LINS1-202ENST00000559149 BIVM-ERCC5R4GMW8 1640 aa11.59□□□□□ -0.55
LINS1-202ENST00000559149 PLCB2Q00722 1185 aa11.58□□□□□ -0.56
LINS1-202ENST00000559149 FGD5Q6ZNL6 1462 aa11.56□□□□□ -0.56
LINS1-202ENST00000559149 SCAF1Q9H7N4 1312 aaKnown RBP11.56□□□□□ -0.56
LINS1-202ENST00000559149 POLA1P09884 1462 aaPredicted RBP11.55□□□□□ -0.56
LINS1-202ENST00000559149 TRIM41Q8WV44 630 aa11.55□□□□□ -0.56
LINS1-202ENST00000559149 RAD54L2Q9Y4B4 1467 aa11.55□□□□□ -0.56
LINS1-202ENST00000559149 CUX2O14529 1486 aa11.54□□□□□ -0.56
LINS1-202ENST00000559149 TARBP1Q13395 1621 aaKnown RBP11.5□□□□□ -0.57
LINS1-202ENST00000559149 RUSC2Q8N2Y8 1516 aa11.48□□□□□ -0.57
LINS1-202ENST00000559149 SOGA1O94964 1423 aa11.48□□□□□ -0.57
LINS1-202ENST00000559149 ZNF608Q9ULD9 1512 aaPredicted RBP11.47□□□□□ -0.57
LINS1-202ENST00000559149 WDR97A6NE52 1622 aa11.47□□□□□ -0.57
LINS1-202ENST00000559149 TAOK2Q9UL54 1235 aa11.46□□□□□ -0.58
LINS1-202ENST00000559149 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
LINS1-202ENST00000559149 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
LINS1-202ENST00000559149 TDRD9Q8NDG6 1382 aaKnown RBP11.44□□□□□ -0.58
LINS1-202ENST00000559149 AQRO60306 1485 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINS1-202ENST00000559149 ABCA10Q8WWZ4 1543 aa11.42□□□□□ -0.58
LINS1-202ENST00000559149 FAM9AQ8IZU1 332 aaPredicted RBP11.42□□□□□ -0.58
LINS1-202ENST00000559149 IFT140Q96RY7 1462 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms