RNA–Protein interactions for RNA: ENST00000557171.1

LINC02346-202, Transcript of long intergenic non-protein coding RNA 2346, humanhuman

TSL 3

Gene LINC02346, Length 518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02346-202ENST00000557171 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
LINC02346-202ENST00000557171 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
LINC02346-202ENST00000557171 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
LINC02346-202ENST00000557171 PHF23Q9BUL5 403 aaPredicted RBP20.26■□□□□ 0.83
LINC02346-202ENST00000557171 ABCC9O60706 1549 aa18.98■□□□□ 0.63
LINC02346-202ENST00000557171 SENP3Q9H4L4 574 aaPredicted RBP18.86■□□□□ 0.61
LINC02346-202ENST00000557171 PLPPR3Q6T4P5 718 aa18.8■□□□□ 0.6
LINC02346-202ENST00000557171 DNAJC5BQ9UF47 199 aa18.45■□□□□ 0.54
LINC02346-202ENST00000557171 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.52
LINC02346-202ENST00000557171 ADRA2BP18089 450 aa17.82■□□□□ 0.44
LINC02346-202ENST00000557171 RB1CC1Q8TDY2 1594 aa17.74■□□□□ 0.43
LINC02346-202ENST00000557171 PABPN1Q86U42 306 aaKnown RBP eCLIP17.73■□□□□ 0.43
LINC02346-202ENST00000557171 PPP6R1Q9UPN7 881 aa17.63■□□□□ 0.41
LINC02346-202ENST00000557171 FOXD1Q16676 465 aa17.55■□□□□ 0.4
LINC02346-202ENST00000557171 DCAF8L2P0C7V8 631 aa17.54■□□□□ 0.4
LINC02346-202ENST00000557171 NACADO15069 1562 aa17.53■□□□□ 0.4
LINC02346-202ENST00000557171 KCNA4P22459 653 aa17.39■□□□□ 0.37
LINC02346-202ENST00000557171 BICRAQ9NZM4 1560 aa17.3■□□□□ 0.36
LINC02346-202ENST00000557171 DNAJC5Q9H3Z4 198 aa17.27■□□□□ 0.36
LINC02346-202ENST00000557171 EHMT2Q96KQ7 1210 aa17.2■□□□□ 0.34
LINC02346-202ENST00000557171 MYO15BQ96JP2 1530 aa17.18■□□□□ 0.34
LINC02346-202ENST00000557171 UNC13AQ9UPW8 1703 aa17.16■□□□□ 0.34
LINC02346-202ENST00000557171 CECR2Q9BXF3 1484 aa17.15■□□□□ 0.34
LINC02346-202ENST00000557171 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
LINC02346-202ENST00000557171 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
LINC02346-202ENST00000557171 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.3
LINC02346-202ENST00000557171 DCAF1Q9Y4B6 1507 aa16.76■□□□□ 0.27
LINC02346-202ENST00000557171 PPP4R3CPQ6ZMV5 832 aa16.76■□□□□ 0.27
LINC02346-202ENST00000557171 ZCCHC6Q5VYS8 1495 aaKnown RBP16.73■□□□□ 0.27
LINC02346-202ENST00000557171 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
LINC02346-202ENST00000557171 PIAS4Q8N2W9 510 aaPredicted RBP16.69■□□□□ 0.26
LINC02346-202ENST00000557171 CSRNP3Q8WYN3 585 aa16.62■□□□□ 0.25
LINC02346-202ENST00000557171 SLC4A1APQ9BWU0 796 aaKnown RBP16.62■□□□□ 0.25
LINC02346-202ENST00000557171 CUX2O14529 1486 aa16.53■□□□□ 0.24
LINC02346-202ENST00000557171 NCBP3Q53F19 620 aaKnown RBP16.41■□□□□ 0.22
LINC02346-202ENST00000557171 ERCC6Q03468 1493 aa16.37■□□□□ 0.21
LINC02346-202ENST00000557171 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
LINC02346-202ENST00000557171 NCAPD3P42695 1498 aa16.32■□□□□ 0.2
LINC02346-202ENST00000557171 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
LINC02346-202ENST00000557171 NESP48681 1621 aa16.18■□□□□ 0.18
LINC02346-202ENST00000557171 ATAD2BQ9ULI0 1458 aa16.17■□□□□ 0.18
LINC02346-202ENST00000557171 ZBTB22O15209 634 aa16.08■□□□□ 0.16
LINC02346-202ENST00000557171 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
LINC02346-202ENST00000557171 HMGXB3Q12766 1538 aa16■□□□□ 0.15
LINC02346-202ENST00000557171 SMARCA2P51531 1590 aa15.99■□□□□ 0.15
LINC02346-202ENST00000557171 THOC2Q8NI27 1593 aaKnown RBP15.97■□□□□ 0.15
LINC02346-202ENST00000557171 PDS5BQ9NTI5 1447 aa15.92■□□□□ 0.14
LINC02346-202ENST00000557171 BAZ1BQ9UIG0 1483 aaKnown RBP15.91■□□□□ 0.14
LINC02346-202ENST00000557171 SMARCA4P51532 1647 aa15.89■□□□□ 0.13
LINC02346-202ENST00000557171 SCAF1Q9H7N4 1312 aaKnown RBP15.88■□□□□ 0.13
LINC02346-202ENST00000557171 LAMC3Q9Y6N6 1575 aa15.87■□□□□ 0.13
LINC02346-202ENST00000557171 OSCARQ8IYS5 282 aa15.84■□□□□ 0.13
LINC02346-202ENST00000557171 CADPSQ9ULU8 1353 aa15.82■□□□□ 0.12
LINC02346-202ENST00000557171 MAPK8IP2Q13387 824 aaPredicted RBP15.8■□□□□ 0.12
LINC02346-202ENST00000557171 PEG3Q9GZU2 1588 aa15.78■□□□□ 0.12
LINC02346-202ENST00000557171 BAZ1AQ9NRL2 1556 aaPredicted RBP15.78■□□□□ 0.12
LINC02346-202ENST00000557171 MRC2Q9UBG0 1479 aa15.76■□□□□ 0.11
LINC02346-202ENST00000557171 KIF21AQ7Z4S6 1674 aa15.73■□□□□ 0.11
LINC02346-202ENST00000557171 WDR62O43379 1518 aa15.7■□□□□ 0.1
LINC02346-202ENST00000557171 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
LINC02346-202ENST00000557171 MSH5O43196 834 aa15.67■□□□□ 0.1
LINC02346-202ENST00000557171 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
LINC02346-202ENST00000557171 CEP164Q9UPV0 1460 aa15.58■□□□□ 0.08
LINC02346-202ENST00000557171 FANCD2Q9BXW9 1451 aa15.56■□□□□ 0.08
LINC02346-202ENST00000557171 CYB5RLQ6IPT4 315 aa15.51■□□□□ 0.07
LINC02346-202ENST00000557171 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
LINC02346-202ENST00000557171 CFTRP13569 1480 aa15.49■□□□□ 0.07
LINC02346-202ENST00000557171 URB2Q14146 1524 aaKnown RBP15.47■□□□□ 0.07
LINC02346-202ENST00000557171 RIMBP3CA6NJZ7 1639 aa15.46■□□□□ 0.07
LINC02346-202ENST00000557171 RIMBP3BA6NNM3 1639 aa15.46■□□□□ 0.07
LINC02346-202ENST00000557171 RIMBP3Q9UFD9 1639 aa15.46■□□□□ 0.07
LINC02346-202ENST00000557171 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
LINC02346-202ENST00000557171 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
LINC02346-202ENST00000557171 WIZO95785 1651 aa15.38■□□□□ 0.05
LINC02346-202ENST00000557171 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
LINC02346-202ENST00000557171 IFT140Q96RY7 1462 aa15.32■□□□□ 0.04
LINC02346-202ENST00000557171 ARAP1Q96P48 1450 aa15.28■□□□□ 0.04
LINC02346-202ENST00000557171 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
LINC02346-202ENST00000557171 RSF1Q96T23 1441 aaPredicted RBP15.26■□□□□ 0.03
LINC02346-202ENST00000557171 HOXD11P31277 338 aaPredicted RBP15.25■□□□□ 0.03
LINC02346-202ENST00000557171 FBLN2P98095 1184 aa15.23■□□□□ 0.03
LINC02346-202ENST00000557171 DMRT2Q9Y5R5 561 aa15.23■□□□□ 0.03
LINC02346-202ENST00000557171 AQRO60306 1485 aaKnown RBP eCLIP15.21■□□□□ 0.03
LINC02346-202ENST00000557171 TOPBP1Q92547 1522 aa15.19■□□□□ 0.02
LINC02346-202ENST00000557171 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
LINC02346-202ENST00000557171 RTN4Q9NQC3 1192 aaKnown RBP15.13■□□□□ 0.01
LINC02346-202ENST00000557171 ABCC8Q09428 1581 aa15.12■□□□□ 0.01
LINC02346-202ENST00000557171 CCDC88BA6NC98 1476 aa15.12■□□□□ 0.01
LINC02346-202ENST00000557171 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
LINC02346-202ENST00000557171 TDRD9Q8NDG6 1382 aaKnown RBP15.07■□□□□ 0
LINC02346-202ENST00000557171 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ -0
LINC02346-202ENST00000557171 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
LINC02346-202ENST00000557171 DNMBPQ6XZF7 1577 aa15.02■□□□□ -0
LINC02346-202ENST00000557171 POLA1P09884 1462 aaPredicted RBP15.01□□□□□ -0.01
LINC02346-202ENST00000557171 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
LINC02346-202ENST00000557171 CHD1O14646 1710 aa15.01□□□□□ -0.01
LINC02346-202ENST00000557171 SOGA1O94964 1423 aa15□□□□□ -0.01
LINC02346-202ENST00000557171 CLASP1Q7Z460 1538 aa14.98□□□□□ -0.01
LINC02346-202ENST00000557171 MYCNP04198 464 aaPredicted RBP14.98□□□□□ -0.01
LINC02346-202ENST00000557171 SNAPC4Q5SXM2 1469 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms