RNA–Protein interactions for RNA: ENST00000556172.1

CGRRF1-203, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 2

Gene CGRRF1, Length 605 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-203ENST00000556172 AEBP2Q6ZN18 517 aaPredicted RBP22.68■■□□□ 1.22
CGRRF1-203ENST00000556172 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
CGRRF1-203ENST00000556172 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
CGRRF1-203ENST00000556172 SENP3Q9H4L4 574 aaPredicted RBP18.98■□□□□ 0.63
CGRRF1-203ENST00000556172 NISCHQ9Y2I1 1504 aa18.08■□□□□ 0.49
CGRRF1-203ENST00000556172 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
CGRRF1-203ENST00000556172 FOXD1Q16676 465 aa17.77■□□□□ 0.44
CGRRF1-203ENST00000556172 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
CGRRF1-203ENST00000556172 ADRA2BP18089 450 aa17.31■□□□□ 0.36
CGRRF1-203ENST00000556172 PIAS4Q8N2W9 510 aaPredicted RBP16.72■□□□□ 0.27
CGRRF1-203ENST00000556172 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
CGRRF1-203ENST00000556172 MSH5O43196 834 aa16.1■□□□□ 0.17
CGRRF1-203ENST00000556172 CCDC180Q9P1Z9 1646 aa16.04■□□□□ 0.16
CGRRF1-203ENST00000556172 PPP4R3CPQ6ZMV5 832 aa16.02■□□□□ 0.16
CGRRF1-203ENST00000556172 KCNA4P22459 653 aa15.94■□□□□ 0.14
CGRRF1-203ENST00000556172 MAPK8IP2Q13387 824 aaPredicted RBP15.71■□□□□ 0.11
CGRRF1-203ENST00000556172 SCAF1Q9H7N4 1312 aaKnown RBP15.57■□□□□ 0.08
CGRRF1-203ENST00000556172 ABCC9O60706 1549 aa15.52■□□□□ 0.07
CGRRF1-203ENST00000556172 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
CGRRF1-203ENST00000556172 NPM3O75607 178 aaKnown RBP15.45■□□□□ 0.06
CGRRF1-203ENST00000556172 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
CGRRF1-203ENST00000556172 DMRT2Q9Y5R5 561 aa15.24■□□□□ 0.03
CGRRF1-203ENST00000556172 SLC4A1APQ9BWU0 796 aaKnown RBP15.12■□□□□ 0.01
CGRRF1-203ENST00000556172 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0.01
CGRRF1-203ENST00000556172 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
CGRRF1-203ENST00000556172 NACADO15069 1562 aa15.05■□□□□ -0
CGRRF1-203ENST00000556172 DCAF8L2P0C7V8 631 aa15.04■□□□□ -0
CGRRF1-203ENST00000556172 RB1CC1Q8TDY2 1594 aa15.02■□□□□ -0
CGRRF1-203ENST00000556172 MYO15BQ96JP2 1530 aa15.02□□□□□ -0.01
CGRRF1-203ENST00000556172 HOXD11P31277 338 aaPredicted RBP15.01□□□□□ -0.01
CGRRF1-203ENST00000556172 EHMT2Q96KQ7 1210 aa15.01□□□□□ -0.01
CGRRF1-203ENST00000556172 DCAF1Q9Y4B6 1507 aa14.99□□□□□ -0.01
CGRRF1-203ENST00000556172 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
CGRRF1-203ENST00000556172 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.05
CGRRF1-203ENST00000556172 ZBTB22O15209 634 aa14.73□□□□□ -0.05
CGRRF1-203ENST00000556172 UNC13AQ9UPW8 1703 aa14.69□□□□□ -0.06
CGRRF1-203ENST00000556172 DCAF8L1A6NGE4 600 aa14.62□□□□□ -0.07
CGRRF1-203ENST00000556172 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
CGRRF1-203ENST00000556172 SLC4A2P04920 1241 aa14.59□□□□□ -0.07
CGRRF1-203ENST00000556172 BICRAQ9NZM4 1560 aa14.54□□□□□ -0.08
CGRRF1-203ENST00000556172 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
CGRRF1-203ENST00000556172 FOXD4L1Q9NU39 408 aa14.48□□□□□ -0.09
CGRRF1-203ENST00000556172 SHROOM4Q9ULL8 1493 aa14.44□□□□□ -0.1
CGRRF1-203ENST00000556172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.29□□□□□ -0.12
CGRRF1-203ENST00000556172 U3KPZ7 1027 aaPredicted RBP14.16□□□□□ -0.14
CGRRF1-203ENST00000556172 EIF4G1Q04637 1599 aaKnown RBP14.15□□□□□ -0.14
CGRRF1-203ENST00000556172 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
CGRRF1-203ENST00000556172 CC2D2AQ9P2K1 1620 aa14.07□□□□□ -0.16
CGRRF1-203ENST00000556172 CECR2Q9BXF3 1484 aa14.05□□□□□ -0.16
CGRRF1-203ENST00000556172 BAZ1AQ9NRL2 1556 aaPredicted RBP14.01□□□□□ -0.17
CGRRF1-203ENST00000556172 SMARCA4P51532 1647 aa14□□□□□ -0.17
CGRRF1-203ENST00000556172 ATF5Q9Y2D1 282 aaPredicted RBP13.99□□□□□ -0.17
CGRRF1-203ENST00000556172 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
CGRRF1-203ENST00000556172 MROH2BQ7Z745 1585 aa13.92□□□□□ -0.18
CGRRF1-203ENST00000556172 SMARCA2P51531 1590 aa13.9□□□□□ -0.18
CGRRF1-203ENST00000556172 ATAD2BQ9ULI0 1458 aa13.89□□□□□ -0.19
CGRRF1-203ENST00000556172 ATXN8OSP0DMR3 200 aa13.88□□□□□ -0.19
CGRRF1-203ENST00000556172 PEG3Q9GZU2 1588 aa13.88□□□□□ -0.19
CGRRF1-203ENST00000556172 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
CGRRF1-203ENST00000556172 CACNB1Q02641 598 aaPredicted RBP13.83□□□□□ -0.2
CGRRF1-203ENST00000556172 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
CGRRF1-203ENST00000556172 RSF1Q96T23 1441 aaPredicted RBP13.82□□□□□ -0.2
CGRRF1-203ENST00000556172 HMGXB3Q12766 1538 aa13.82□□□□□ -0.2
CGRRF1-203ENST00000556172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.81□□□□□ -0.2
CGRRF1-203ENST00000556172 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
CGRRF1-203ENST00000556172 BAZ1BQ9UIG0 1483 aaKnown RBP13.79□□□□□ -0.2
CGRRF1-203ENST00000556172 WIZO95785 1651 aa13.78□□□□□ -0.2
CGRRF1-203ENST00000556172 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
CGRRF1-203ENST00000556172 C1QBPQ07021 282 aaKnown RBP13.69□□□□□ -0.22
CGRRF1-203ENST00000556172 TOP2AP11388 1531 aaKnown RBP13.65□□□□□ -0.22
CGRRF1-203ENST00000556172 TRHP20396 242 aaPredicted RBP13.62□□□□□ -0.23
CGRRF1-203ENST00000556172 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
CGRRF1-203ENST00000556172 CAPN15O75808 1086 aa13.59□□□□□ -0.23
CGRRF1-203ENST00000556172 SUPT5HO00267 1087 aaKnown RBP13.56□□□□□ -0.24
CGRRF1-203ENST00000556172 APLP2Q06481 763 aa13.56□□□□□ -0.24
CGRRF1-203ENST00000556172 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
CGRRF1-203ENST00000556172 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
CGRRF1-203ENST00000556172 CADPSQ9ULU8 1353 aa13.47□□□□□ -0.25
CGRRF1-203ENST00000556172 NESP48681 1621 aa13.46□□□□□ -0.25
CGRRF1-203ENST00000556172 POLA2Q14181 598 aa13.45□□□□□ -0.26
CGRRF1-203ENST00000556172 ABCB7O75027 752 aa13.44□□□□□ -0.26
CGRRF1-203ENST00000556172 CFTRP13569 1480 aa13.42□□□□□ -0.26
CGRRF1-203ENST00000556172 PDS5BQ9NTI5 1447 aa13.4□□□□□ -0.26
CGRRF1-203ENST00000556172 ERCC6Q03468 1493 aa13.39□□□□□ -0.27
CGRRF1-203ENST00000556172 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
CGRRF1-203ENST00000556172 DSG3P32926 999 aa13.35□□□□□ -0.27
CGRRF1-203ENST00000556172 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
CGRRF1-203ENST00000556172 KIF21AQ7Z4S6 1674 aa13.34□□□□□ -0.27
CGRRF1-203ENST00000556172 FANCD2Q9BXW9 1451 aa13.31□□□□□ -0.28
CGRRF1-203ENST00000556172 CEP164Q9UPV0 1460 aa13.29□□□□□ -0.28
CGRRF1-203ENST00000556172 FKBP8Q14318 412 aa13.28□□□□□ -0.28
CGRRF1-203ENST00000556172 THOC2Q8NI27 1593 aaKnown RBP13.24□□□□□ -0.29
CGRRF1-203ENST00000556172 MRC2Q9UBG0 1479 aa13.23□□□□□ -0.29
CGRRF1-203ENST00000556172 CUX2O14529 1486 aa13.21□□□□□ -0.3
CGRRF1-203ENST00000556172 WDR62O43379 1518 aa13.19□□□□□ -0.3
CGRRF1-203ENST00000556172 URB2Q14146 1524 aaKnown RBP13.16□□□□□ -0.3
CGRRF1-203ENST00000556172 ABCC8Q09428 1581 aa13.15□□□□□ -0.3
CGRRF1-203ENST00000556172 FBLN2P98095 1184 aa13.13□□□□□ -0.31
CGRRF1-203ENST00000556172 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
CGRRF1-203ENST00000556172 TOPBP1Q92547 1522 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms