RNA–Protein interactions for RNA: ENST00000556046.5

FAM71D-208, Transcript of family with sequence similarity 71 member D, humanhuman

TSL 5

Gene FAM71D, Length 2,136 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM71D-208ENST00000556046 NISCHQ9Y2I1 1504 aa14.52□□□□□ -0.09
FAM71D-208ENST00000556046 SHROOM4Q9ULL8 1493 aa12.35□□□□□ -0.43
FAM71D-208ENST00000556046 ZCCHC6Q5VYS8 1495 aaKnown RBP12.28□□□□□ -0.44
FAM71D-208ENST00000556046 CCDC180Q9P1Z9 1646 aa12.27□□□□□ -0.45
FAM71D-208ENST00000556046 SUPT5HO00267 1087 aaKnown RBP12.11□□□□□ -0.47
FAM71D-208ENST00000556046 DCAF8L2P0C7V8 631 aa12□□□□□ -0.49
FAM71D-208ENST00000556046 DCAF1Q9Y4B6 1507 aa11.91□□□□□ -0.5
FAM71D-208ENST00000556046 CHIC1Q5VXU3 224 aa11.83□□□□□ -0.52
FAM71D-208ENST00000556046 MYO15BQ96JP2 1530 aa11.77□□□□□ -0.52
FAM71D-208ENST00000556046 ABCC9O60706 1549 aa11.55□□□□□ -0.56
FAM71D-208ENST00000556046 SCRIBQ14160 1630 aa11.52□□□□□ -0.57
FAM71D-208ENST00000556046 RSF1Q96T23 1441 aaPredicted RBP11.52□□□□□ -0.57
FAM71D-208ENST00000556046 LOC105371045A0A1W2PR82 267 aa11.48□□□□□ -0.57
FAM71D-208ENST00000556046 HRCP23327 699 aa11.42□□□□□ -0.58
FAM71D-208ENST00000556046 PCGF6Q9BYE7 350 aa11.41□□□□□ -0.58
FAM71D-208ENST00000556046 NACADO15069 1562 aa11.38□□□□□ -0.59
FAM71D-208ENST00000556046 CECR2Q9BXF3 1484 aa11.35□□□□□ -0.59
FAM71D-208ENST00000556046 RB1CC1Q8TDY2 1594 aa11.34□□□□□ -0.59
FAM71D-208ENST00000556046 MROH2BQ7Z745 1585 aa11.3□□□□□ -0.6
FAM71D-208ENST00000556046 TRIM41Q8WV44 630 aa11.28□□□□□ -0.6
FAM71D-208ENST00000556046 PPARGC1BQ86YN6 1023 aaKnown RBP11.21□□□□□ -0.62
FAM71D-208ENST00000556046 TRIM26Q12899 539 aaPredicted RBP11.2□□□□□ -0.62
FAM71D-208ENST00000556046 WIZO95785 1651 aa11.2□□□□□ -0.62
FAM71D-208ENST00000556046 FAM9AQ8IZU1 332 aaPredicted RBP11.18□□□□□ -0.62
FAM71D-208ENST00000556046 BAZ1AQ9NRL2 1556 aaPredicted RBP11.11□□□□□ -0.63
FAM71D-208ENST00000556046 EHMT2Q96KQ7 1210 aa11.08□□□□□ -0.64
FAM71D-208ENST00000556046 EIF4G1Q04637 1599 aaKnown RBP11.08□□□□□ -0.64
FAM71D-208ENST00000556046 AEBP2Q6ZN18 517 aaPredicted RBP11.04□□□□□ -0.64
FAM71D-208ENST00000556046 TOP2AP11388 1531 aaKnown RBP11.02□□□□□ -0.65
FAM71D-208ENST00000556046 SMARCA4P51532 1647 aa11.02□□□□□ -0.65
FAM71D-208ENST00000556046 CCDC88BA6NC98 1476 aa11.02□□□□□ -0.65
FAM71D-208ENST00000556046 UNC13AQ9UPW8 1703 aa10.99□□□□□ -0.65
FAM71D-208ENST00000556046 SMARCA2P51531 1590 aa10.97□□□□□ -0.65
FAM71D-208ENST00000556046 ABCC8Q09428 1581 aa10.96□□□□□ -0.66
FAM71D-208ENST00000556046 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
FAM71D-208ENST00000556046 BICRAQ9NZM4 1560 aa10.93□□□□□ -0.66
FAM71D-208ENST00000556046 ZEB1P37275 1124 aaPredicted RBP10.91□□□□□ -0.66
FAM71D-208ENST00000556046 SOGA1O94964 1423 aa10.89□□□□□ -0.67
FAM71D-208ENST00000556046 RUSC2Q8N2Y8 1516 aa10.85□□□□□ -0.67
FAM71D-208ENST00000556046 PEG3Q9GZU2 1588 aa10.84□□□□□ -0.67
FAM71D-208ENST00000556046 CSRNP3Q8WYN3 585 aa10.82□□□□□ -0.68
FAM71D-208ENST00000556046 WRNQ14191 1432 aaPredicted RBP eCLIP10.81□□□□□ -0.68
FAM71D-208ENST00000556046 TNIKQ9UKE5 1360 aa10.81□□□□□ -0.68
FAM71D-208ENST00000556046 CEP162Q5TB80 1403 aa10.8□□□□□ -0.68
FAM71D-208ENST00000556046 ATAD2BQ9ULI0 1458 aa10.78□□□□□ -0.68
FAM71D-208ENST00000556046 EEA1Q15075 1411 aa10.78□□□□□ -0.68
FAM71D-208ENST00000556046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.76□□□□□ -0.69
FAM71D-208ENST00000556046 UBTFP17480 764 aaKnown RBP10.73□□□□□ -0.69
FAM71D-208ENST00000556046 SYNJ1O43426 1573 aa10.72□□□□□ -0.69
FAM71D-208ENST00000556046 TTBK1Q5TCY1 1321 aaPredicted RBP10.71□□□□□ -0.69
FAM71D-208ENST00000556046 BAZ1BQ9UIG0 1483 aaKnown RBP10.71□□□□□ -0.69
FAM71D-208ENST00000556046 GOLGA3Q08378 1498 aa10.7□□□□□ -0.7
FAM71D-208ENST00000556046 CCER1Q8TC90 406 aaPredicted RBP10.69□□□□□ -0.7
FAM71D-208ENST00000556046 CEP164Q9UPV0 1460 aa10.65□□□□□ -0.7
FAM71D-208ENST00000556046 KIF21BO75037 1637 aa10.63□□□□□ -0.71
FAM71D-208ENST00000556046 RAPGEF2Q9Y4G8 1499 aa10.61□□□□□ -0.71
FAM71D-208ENST00000556046 CLIP1P30622 1438 aa10.59□□□□□ -0.71
FAM71D-208ENST00000556046 NCAPD3P42695 1498 aa10.58□□□□□ -0.72
FAM71D-208ENST00000556046 TOP2BQ02880 1626 aa10.58□□□□□ -0.72
FAM71D-208ENST00000556046 VPS8Q8N3P4 1428 aa10.55□□□□□ -0.72
FAM71D-208ENST00000556046 HMGXB3Q12766 1538 aa10.53□□□□□ -0.72
FAM71D-208ENST00000556046 BIVM-ERCC5R4GMW8 1640 aa10.53□□□□□ -0.72
FAM71D-208ENST00000556046 SCAF1Q9H7N4 1312 aaKnown RBP10.53□□□□□ -0.72
FAM71D-208ENST00000556046 PRXQ9BXM0 1461 aa10.52□□□□□ -0.72
FAM71D-208ENST00000556046 RANGAP1P46060 587 aaPredicted RBP10.51□□□□□ -0.73
FAM71D-208ENST00000556046 CUX1P39880 1505 aa10.5□□□□□ -0.73
FAM71D-208ENST00000556046 HNRNPUL2Q1KMD3 747 aaKnown RBP10.5□□□□□ -0.73
FAM71D-208ENST00000556046 DIEXFQ68CQ4 756 aaKnown RBP10.49□□□□□ -0.73
FAM71D-208ENST00000556046 CFTRP13569 1480 aa10.49□□□□□ -0.73
FAM71D-208ENST00000556046 ERICH3Q5RHP9 1530 aa10.47□□□□□ -0.73
FAM71D-208ENST00000556046 ARAP1Q96P48 1450 aa10.46□□□□□ -0.74
FAM71D-208ENST00000556046 APLP2Q06481 763 aa10.44□□□□□ -0.74
FAM71D-208ENST00000556046 ZNF316A6NFI3 1004 aaPredicted RBP10.43□□□□□ -0.74
FAM71D-208ENST00000556046 KIF27Q86VH2 1401 aa10.43□□□□□ -0.74
FAM71D-208ENST00000556046 KANK4Q5T7N3 995 aaPredicted RBP10.43□□□□□ -0.74
FAM71D-208ENST00000556046 NEUROD1Q13562 356 aa10.42□□□□□ -0.74
FAM71D-208ENST00000556046 ACIN1Q9UKV3 1341 aaKnown RBP10.42□□□□□ -0.74
FAM71D-208ENST00000556046 IGF1RP08069 1367 aa10.38□□□□□ -0.75
FAM71D-208ENST00000556046 CADPSQ9ULU8 1353 aa10.38□□□□□ -0.75
FAM71D-208ENST00000556046 ARHGAP35Q9NRY4 1499 aa10.37□□□□□ -0.75
FAM71D-208ENST00000556046 CUX2O14529 1486 aa10.34□□□□□ -0.75
FAM71D-208ENST00000556046 RRBP1Q9P2E9 1410 aaKnown RBP10.33□□□□□ -0.76
FAM71D-208ENST00000556046 DHX57Q6P158 1386 aaKnown RBP10.33□□□□□ -0.76
FAM71D-208ENST00000556046 MIER1Q8N108 512 aa10.3□□□□□ -0.76
FAM71D-208ENST00000556046 FGD5Q6ZNL6 1462 aa10.3□□□□□ -0.76
FAM71D-208ENST00000556046 CARMIL1Q5VZK9 1371 aa10.3□□□□□ -0.76
FAM71D-208ENST00000556046 CLSPNQ9HAW4 1339 aa10.29□□□□□ -0.76
FAM71D-208ENST00000556046 CENPBP07199 599 aaPredicted RBP10.28□□□□□ -0.76
FAM71D-208ENST00000556046 GTF3C3Q9Y5Q9 886 aa10.28□□□□□ -0.76
FAM71D-208ENST00000556046 PRDM2Q13029 1718 aa10.28□□□□□ -0.76
FAM71D-208ENST00000556046 CCNB3Q8WWL7 1395 aa10.27□□□□□ -0.77
FAM71D-208ENST00000556046 CC2D2AQ9P2K1 1620 aa10.27□□□□□ -0.77
FAM71D-208ENST00000556046 FANCD2Q9BXW9 1451 aa10.25□□□□□ -0.77
FAM71D-208ENST00000556046 MAP3K1Q13233 1512 aa10.22□□□□□ -0.77
FAM71D-208ENST00000556046 RAD54L2Q9Y4B4 1467 aa10.22□□□□□ -0.77
FAM71D-208ENST00000556046 YTHDC1Q96MU7 727 aaKnown RBP10.21□□□□□ -0.77
FAM71D-208ENST00000556046 TIAM1Q13009 1591 aa10.21□□□□□ -0.78
FAM71D-208ENST00000556046 ITGAEP38570 1179 aa10.21□□□□□ -0.78
FAM71D-208ENST00000556046 LRRC9Q6ZRR7 1453 aa10.2□□□□□ -0.78
FAM71D-208ENST00000556046 PHLDB1Q86UU1 1377 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms