RNA–Protein interactions for RNA: ENST00000555923.1

SEL1L-205, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

TSL 4

Gene SEL1L, Length 604 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-205ENST00000555923 AEBP2Q6ZN18 517 aaPredicted RBP18.71■□□□□ 0.59
SEL1L-205ENST00000555923 CHIC1Q5VXU3 224 aa18.29■□□□□ 0.52
SEL1L-205ENST00000555923 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
SEL1L-205ENST00000555923 PHF23Q9BUL5 403 aaPredicted RBP16.04■□□□□ 0.16
SEL1L-205ENST00000555923 SENP3Q9H4L4 574 aaPredicted RBP15.98■□□□□ 0.15
SEL1L-205ENST00000555923 PLPPR3Q6T4P5 718 aa14.87□□□□□ -0.03
SEL1L-205ENST00000555923 FOXD1Q16676 465 aa14.78□□□□□ -0.04
SEL1L-205ENST00000555923 ABCC9O60706 1549 aa14.54□□□□□ -0.08
SEL1L-205ENST00000555923 CCDC180Q9P1Z9 1646 aa14.53□□□□□ -0.08
SEL1L-205ENST00000555923 ADRA2BP18089 450 aa14.17□□□□□ -0.14
SEL1L-205ENST00000555923 PPP6R1Q9UPN7 881 aa14.17□□□□□ -0.14
SEL1L-205ENST00000555923 PIAS4Q8N2W9 510 aaPredicted RBP13.96□□□□□ -0.17
SEL1L-205ENST00000555923 RB1CC1Q8TDY2 1594 aa13.8□□□□□ -0.2
SEL1L-205ENST00000555923 MSH5O43196 834 aa13.71□□□□□ -0.21
SEL1L-205ENST00000555923 NACADO15069 1562 aa13.71□□□□□ -0.22
SEL1L-205ENST00000555923 DCAF8L2P0C7V8 631 aa13.61□□□□□ -0.23
SEL1L-205ENST00000555923 DNAJC5BQ9UF47 199 aa13.6□□□□□ -0.23
SEL1L-205ENST00000555923 UNC13AQ9UPW8 1703 aa13.54□□□□□ -0.24
SEL1L-205ENST00000555923 MYO15BQ96JP2 1530 aa13.51□□□□□ -0.25
SEL1L-205ENST00000555923 PABPN1Q86U42 306 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEL1L-205ENST00000555923 BICRAQ9NZM4 1560 aa13.45□□□□□ -0.26
SEL1L-205ENST00000555923 ZCCHC6Q5VYS8 1495 aaKnown RBP13.45□□□□□ -0.26
SEL1L-205ENST00000555923 DCAF1Q9Y4B6 1507 aa13.35□□□□□ -0.27
SEL1L-205ENST00000555923 SCRIBQ14160 1630 aa13.29□□□□□ -0.28
SEL1L-205ENST00000555923 SHROOM4Q9ULL8 1493 aa13.22□□□□□ -0.29
SEL1L-205ENST00000555923 CC2D2AQ9P2K1 1620 aa13.13□□□□□ -0.31
SEL1L-205ENST00000555923 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
SEL1L-205ENST00000555923 PPP4R3CPQ6ZMV5 832 aa13.08□□□□□ -0.32
SEL1L-205ENST00000555923 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.32
SEL1L-205ENST00000555923 CECR2Q9BXF3 1484 aa13.07□□□□□ -0.32
SEL1L-205ENST00000555923 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
SEL1L-205ENST00000555923 NCBP3Q53F19 620 aaKnown RBP12.79□□□□□ -0.36
SEL1L-205ENST00000555923 CNKSR2Q8WXI2 1034 aa12.74□□□□□ -0.37
SEL1L-205ENST00000555923 DMRT2Q9Y5R5 561 aa12.72□□□□□ -0.37
SEL1L-205ENST00000555923 KCNA4P22459 653 aa12.69□□□□□ -0.38
SEL1L-205ENST00000555923 SMARCA4P51532 1647 aa12.66□□□□□ -0.38
SEL1L-205ENST00000555923 NCAPD3P42695 1498 aa12.65□□□□□ -0.38
SEL1L-205ENST00000555923 ATAD2BQ9ULI0 1458 aa12.64□□□□□ -0.39
SEL1L-205ENST00000555923 SMARCA2P51531 1590 aa12.59□□□□□ -0.39
SEL1L-205ENST00000555923 HMGXB3Q12766 1538 aa12.58□□□□□ -0.4
SEL1L-205ENST00000555923 BAZ1AQ9NRL2 1556 aaPredicted RBP12.56□□□□□ -0.4
SEL1L-205ENST00000555923 ERCC6Q03468 1493 aa12.53□□□□□ -0.4
SEL1L-205ENST00000555923 BAZ1BQ9UIG0 1483 aaKnown RBP12.52□□□□□ -0.41
SEL1L-205ENST00000555923 NPM3O75607 178 aaKnown RBP12.51□□□□□ -0.41
SEL1L-205ENST00000555923 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
SEL1L-205ENST00000555923 NESP48681 1621 aa12.51□□□□□ -0.41
SEL1L-205ENST00000555923 POTEDQ86YR6 584 aa12.5□□□□□ -0.41
SEL1L-205ENST00000555923 PEG3Q9GZU2 1588 aa12.5□□□□□ -0.41
SEL1L-205ENST00000555923 CUX2O14529 1486 aa12.49□□□□□ -0.41
SEL1L-205ENST00000555923 RNF216Q9NWF9 866 aaPredicted RBP12.49□□□□□ -0.41
SEL1L-205ENST00000555923 HOXD11P31277 338 aaPredicted RBP12.44□□□□□ -0.42
SEL1L-205ENST00000555923 DNAJC5Q9H3Z4 198 aa12.43□□□□□ -0.42
SEL1L-205ENST00000555923 THOC2Q8NI27 1593 aaKnown RBP12.39□□□□□ -0.43
SEL1L-205ENST00000555923 LAMC3Q9Y6N6 1575 aa12.38□□□□□ -0.43
SEL1L-205ENST00000555923 WIZO95785 1651 aa12.36□□□□□ -0.43
SEL1L-205ENST00000555923 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
SEL1L-205ENST00000555923 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
SEL1L-205ENST00000555923 CADPSQ9ULU8 1353 aa12.26□□□□□ -0.45
SEL1L-205ENST00000555923 RSF1Q96T23 1441 aaPredicted RBP12.22□□□□□ -0.45
SEL1L-205ENST00000555923 MRC2Q9UBG0 1479 aa12.21□□□□□ -0.45
SEL1L-205ENST00000555923 DCAF8L1A6NGE4 600 aa12.21□□□□□ -0.45
SEL1L-205ENST00000555923 WDR62O43379 1518 aa12.2□□□□□ -0.46
SEL1L-205ENST00000555923 TOP2AP11388 1531 aaKnown RBP12.19□□□□□ -0.46
SEL1L-205ENST00000555923 CEP164Q9UPV0 1460 aa12.17□□□□□ -0.46
SEL1L-205ENST00000555923 FANCD2Q9BXW9 1451 aa12.15□□□□□ -0.46
SEL1L-205ENST00000555923 CFTRP13569 1480 aa12.14□□□□□ -0.47
SEL1L-205ENST00000555923 SLC4A1APQ9BWU0 796 aaKnown RBP12.12□□□□□ -0.47
SEL1L-205ENST00000555923 URB2Q14146 1524 aaKnown RBP12.07□□□□□ -0.48
SEL1L-205ENST00000555923 PRDM2Q13029 1718 aa12.04□□□□□ -0.48
SEL1L-205ENST00000555923 CCDC88BA6NC98 1476 aa12.03□□□□□ -0.48
SEL1L-205ENST00000555923 TOPBP1Q92547 1522 aa11.93□□□□□ -0.5
SEL1L-205ENST00000555923 ZNF608Q9ULD9 1512 aaPredicted RBP11.93□□□□□ -0.5
SEL1L-205ENST00000555923 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
SEL1L-205ENST00000555923 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
SEL1L-205ENST00000555923 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.9□□□□□ -0.5
SEL1L-205ENST00000555923 DNMBPQ6XZF7 1577 aa11.89□□□□□ -0.51
SEL1L-205ENST00000555923 EIF4G3O43432 1585 aaKnown RBP11.88□□□□□ -0.51
SEL1L-205ENST00000555923 OSCARQ8IYS5 282 aa11.87□□□□□ -0.51
SEL1L-205ENST00000555923 ABCC8Q09428 1581 aa11.84□□□□□ -0.51
SEL1L-205ENST00000555923 TARBP1Q13395 1621 aaKnown RBP11.83□□□□□ -0.52
SEL1L-205ENST00000555923 POLA1P09884 1462 aaPredicted RBP11.82□□□□□ -0.52
SEL1L-205ENST00000555923 SLC4A2P04920 1241 aa11.81□□□□□ -0.52
SEL1L-205ENST00000555923 RIMBP3CA6NJZ7 1639 aa11.81□□□□□ -0.52
SEL1L-205ENST00000555923 RIMBP3BA6NNM3 1639 aa11.81□□□□□ -0.52
SEL1L-205ENST00000555923 RIMBP3Q9UFD9 1639 aa11.81□□□□□ -0.52
SEL1L-205ENST00000555923 AQRO60306 1485 aaKnown RBP eCLIP11.79□□□□□ -0.52
SEL1L-205ENST00000555923 CHD1O14646 1710 aa11.78□□□□□ -0.52
SEL1L-205ENST00000555923 RAD54L2Q9Y4B4 1467 aa11.77□□□□□ -0.52
SEL1L-205ENST00000555923 ARHGEF11O15085 1522 aa11.76□□□□□ -0.53
SEL1L-205ENST00000555923 CUX1P39880 1505 aa11.76□□□□□ -0.53
SEL1L-205ENST00000555923 FGD5Q6ZNL6 1462 aa11.75□□□□□ -0.53
SEL1L-205ENST00000555923 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
SEL1L-205ENST00000555923 SOGA1O94964 1423 aa11.72□□□□□ -0.53
SEL1L-205ENST00000555923 TDRD9Q8NDG6 1382 aaKnown RBP11.72□□□□□ -0.53
SEL1L-205ENST00000555923 SNAPC4Q5SXM2 1469 aa11.7□□□□□ -0.54
SEL1L-205ENST00000555923 EHMT2Q96KQ7 1210 aa11.7□□□□□ -0.54
SEL1L-205ENST00000555923 RNF39Q9H2S5 420 aa11.7□□□□□ -0.54
SEL1L-205ENST00000555923 WDR97A6NE52 1622 aa11.69□□□□□ -0.54
SEL1L-205ENST00000555923 SUPT5HO00267 1087 aaKnown RBP11.67□□□□□ -0.54
SEL1L-205ENST00000555923 FBLN2P98095 1184 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms