RNA–Protein interactions for RNA: ENST00000554626.5

NEMF-205, Transcript of nuclear export mediator factor, humanhuman

TSL 5

Gene NEMF, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-205ENST00000554626 AEBP2Q6ZN18 517 aaPredicted RBP19.67■□□□□ 0.74
NEMF-205ENST00000554626 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
NEMF-205ENST00000554626 PHF23Q9BUL5 403 aaPredicted RBP16.84■□□□□ 0.29
NEMF-205ENST00000554626 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
NEMF-205ENST00000554626 NISCHQ9Y2I1 1504 aa16.05■□□□□ 0.16
NEMF-205ENST00000554626 FOXD1Q16676 465 aa15.59■□□□□ 0.09
NEMF-205ENST00000554626 PLPPR3Q6T4P5 718 aa15.39■□□□□ 0.05
NEMF-205ENST00000554626 PPP6R1Q9UPN7 881 aa14.83□□□□□ -0.04
NEMF-205ENST00000554626 ADRA2BP18089 450 aa14.77□□□□□ -0.05
NEMF-205ENST00000554626 ABCC9O60706 1549 aa14.76□□□□□ -0.05
NEMF-205ENST00000554626 PIAS4Q8N2W9 510 aaPredicted RBP14.52□□□□□ -0.09
NEMF-205ENST00000554626 MSH5O43196 834 aa14.42□□□□□ -0.1
NEMF-205ENST00000554626 CCDC180Q9P1Z9 1646 aa14.37□□□□□ -0.11
NEMF-205ENST00000554626 DNAJC5BQ9UF47 199 aa14.15□□□□□ -0.14
NEMF-205ENST00000554626 POTEDQ86YR6 584 aa14.1□□□□□ -0.15
NEMF-205ENST00000554626 RB1CC1Q8TDY2 1594 aa13.81□□□□□ -0.2
NEMF-205ENST00000554626 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
NEMF-205ENST00000554626 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
NEMF-205ENST00000554626 PPP4R3CPQ6ZMV5 832 aa13.64□□□□□ -0.23
NEMF-205ENST00000554626 NACADO15069 1562 aa13.6□□□□□ -0.23
NEMF-205ENST00000554626 DCAF8L2P0C7V8 631 aa13.54□□□□□ -0.24
NEMF-205ENST00000554626 BICRAQ9NZM4 1560 aa13.52□□□□□ -0.25
NEMF-205ENST00000554626 KCNA4P22459 653 aa13.49□□□□□ -0.25
NEMF-205ENST00000554626 MAPK8IP2Q13387 824 aaPredicted RBP13.48□□□□□ -0.25
NEMF-205ENST00000554626 ZCCHC6Q5VYS8 1495 aaKnown RBP13.44□□□□□ -0.26
NEMF-205ENST00000554626 DCAF1Q9Y4B6 1507 aa13.37□□□□□ -0.27
NEMF-205ENST00000554626 MYO15BQ96JP2 1530 aa13.36□□□□□ -0.27
NEMF-205ENST00000554626 CC2D2AQ9P2K1 1620 aa13.31□□□□□ -0.28
NEMF-205ENST00000554626 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
NEMF-205ENST00000554626 CECR2Q9BXF3 1484 aa13.27□□□□□ -0.29
NEMF-205ENST00000554626 DMRT2Q9Y5R5 561 aa13.21□□□□□ -0.29
NEMF-205ENST00000554626 SCRIBQ14160 1630 aa13.18□□□□□ -0.3
NEMF-205ENST00000554626 CNKSR2Q8WXI2 1034 aa13.18□□□□□ -0.3
NEMF-205ENST00000554626 EIF4G1Q04637 1599 aaKnown RBP13.16□□□□□ -0.3
NEMF-205ENST00000554626 NCBP3Q53F19 620 aaKnown RBP13.16□□□□□ -0.3
NEMF-205ENST00000554626 NPM3O75607 178 aaKnown RBP13.15□□□□□ -0.3
NEMF-205ENST00000554626 DNAJC5Q9H3Z4 198 aa13.1□□□□□ -0.31
NEMF-205ENST00000554626 SHROOM4Q9ULL8 1493 aa13.09□□□□□ -0.31
NEMF-205ENST00000554626 RNF216Q9NWF9 866 aaPredicted RBP12.91□□□□□ -0.34
NEMF-205ENST00000554626 HOXD11P31277 338 aaPredicted RBP12.88□□□□□ -0.35
NEMF-205ENST00000554626 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.37
NEMF-205ENST00000554626 CUX2O14529 1486 aa12.73□□□□□ -0.37
NEMF-205ENST00000554626 DCAF8L1A6NGE4 600 aa12.73□□□□□ -0.37
NEMF-205ENST00000554626 ERCC6Q03468 1493 aa12.71□□□□□ -0.38
NEMF-205ENST00000554626 NESP48681 1621 aa12.62□□□□□ -0.39
NEMF-205ENST00000554626 EHMT2Q96KQ7 1210 aa12.57□□□□□ -0.4
NEMF-205ENST00000554626 NCAPD3P42695 1498 aa12.55□□□□□ -0.4
NEMF-205ENST00000554626 THOC2Q8NI27 1593 aaKnown RBP12.54□□□□□ -0.4
NEMF-205ENST00000554626 ATAD2BQ9ULI0 1458 aa12.53□□□□□ -0.4
NEMF-205ENST00000554626 ZBTB22O15209 634 aa12.5□□□□□ -0.41
NEMF-205ENST00000554626 TRIM41Q8WV44 630 aa12.5□□□□□ -0.41
NEMF-205ENST00000554626 SMARCA2P51531 1590 aa12.48□□□□□ -0.41
NEMF-205ENST00000554626 KIF21AQ7Z4S6 1674 aa12.48□□□□□ -0.41
NEMF-205ENST00000554626 SMARCA4P51532 1647 aa12.48□□□□□ -0.41
NEMF-205ENST00000554626 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
NEMF-205ENST00000554626 BAZ1AQ9NRL2 1556 aaPredicted RBP12.44□□□□□ -0.42
NEMF-205ENST00000554626 SLC4A2P04920 1241 aa12.44□□□□□ -0.42
NEMF-205ENST00000554626 CSRNP3Q8WYN3 585 aa12.44□□□□□ -0.42
NEMF-205ENST00000554626 CACNB1Q02641 598 aaPredicted RBP12.43□□□□□ -0.42
NEMF-205ENST00000554626 BAZ1BQ9UIG0 1483 aaKnown RBP12.39□□□□□ -0.43
NEMF-205ENST00000554626 RNF39Q9H2S5 420 aa12.38□□□□□ -0.43
NEMF-205ENST00000554626 LAMC3Q9Y6N6 1575 aa12.35□□□□□ -0.43
NEMF-205ENST00000554626 MROH2BQ7Z745 1585 aa12.34□□□□□ -0.43
NEMF-205ENST00000554626 PEG3Q9GZU2 1588 aa12.34□□□□□ -0.43
NEMF-205ENST00000554626 RSF1Q96T23 1441 aaPredicted RBP12.3□□□□□ -0.44
NEMF-205ENST00000554626 FOXD4L1Q9NU39 408 aa12.3□□□□□ -0.44
NEMF-205ENST00000554626 PDS5BQ9NTI5 1447 aa12.24□□□□□ -0.45
NEMF-205ENST00000554626 MRC2Q9UBG0 1479 aa12.23□□□□□ -0.45
NEMF-205ENST00000554626 WDR62O43379 1518 aa12.22□□□□□ -0.45
NEMF-205ENST00000554626 WIZO95785 1651 aa12.19□□□□□ -0.46
NEMF-205ENST00000554626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.18□□□□□ -0.46
NEMF-205ENST00000554626 CADPSQ9ULU8 1353 aa12.16□□□□□ -0.46
NEMF-205ENST00000554626 C1QBPQ07021 282 aaKnown RBP12.15□□□□□ -0.46
NEMF-205ENST00000554626 TOP2AP11388 1531 aaKnown RBP12.15□□□□□ -0.46
NEMF-205ENST00000554626 U3KPZ7 1027 aaPredicted RBP12.12□□□□□ -0.47
NEMF-205ENST00000554626 CEP164Q9UPV0 1460 aa12.11□□□□□ -0.47
NEMF-205ENST00000554626 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
NEMF-205ENST00000554626 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
NEMF-205ENST00000554626 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
NEMF-205ENST00000554626 FANCD2Q9BXW9 1451 aa12.08□□□□□ -0.48
NEMF-205ENST00000554626 SUPT5HO00267 1087 aaKnown RBP12.06□□□□□ -0.48
NEMF-205ENST00000554626 MYCNP04198 464 aaPredicted RBP12.06□□□□□ -0.48
NEMF-205ENST00000554626 OSCARQ8IYS5 282 aa12.06□□□□□ -0.48
NEMF-205ENST00000554626 URB2Q14146 1524 aaKnown RBP12.05□□□□□ -0.48
NEMF-205ENST00000554626 ARHGEF11O15085 1522 aa11.99□□□□□ -0.49
NEMF-205ENST00000554626 ZNF608Q9ULD9 1512 aaPredicted RBP11.97□□□□□ -0.49
NEMF-205ENST00000554626 CCDC88BA6NC98 1476 aa11.96□□□□□ -0.49
NEMF-205ENST00000554626 CFTRP13569 1480 aa11.96□□□□□ -0.49
NEMF-205ENST00000554626 PRDM2Q13029 1718 aa11.93□□□□□ -0.5
NEMF-205ENST00000554626 CHD1O14646 1710 aa11.91□□□□□ -0.5
NEMF-205ENST00000554626 ATF5Q9Y2D1 282 aaPredicted RBP11.91□□□□□ -0.5
NEMF-205ENST00000554626 EIF4G3O43432 1585 aaKnown RBP11.89□□□□□ -0.51
NEMF-205ENST00000554626 CYB5RLQ6IPT4 315 aa11.88□□□□□ -0.51
NEMF-205ENST00000554626 ARAP1Q96P48 1450 aa11.87□□□□□ -0.51
NEMF-205ENST00000554626 TRHP20396 242 aaPredicted RBP11.86□□□□□ -0.51
NEMF-205ENST00000554626 IFT140Q96RY7 1462 aa11.84□□□□□ -0.51
NEMF-205ENST00000554626 TOPBP1Q92547 1522 aa11.83□□□□□ -0.52
NEMF-205ENST00000554626 SPINK5Q9NQ38 1064 aaPredicted RBP11.81□□□□□ -0.52
NEMF-205ENST00000554626 ATXN8OSP0DMR3 200 aa11.8□□□□□ -0.52
NEMF-205ENST00000554626 SAMD1Q6SPF0 538 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms