RNA–Protein interactions for RNA: ENST00000553500.5

RPGRIP1-203, Transcript of RPGR interacting protein 1, humanhuman

TSL 4

Gene RPGRIP1, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-203ENST00000553500 AEBP2Q6ZN18 517 aaPredicted RBP20.46■□□□□ 0.87
RPGRIP1-203ENST00000553500 CHIC1Q5VXU3 224 aa20.28■□□□□ 0.84
RPGRIP1-203ENST00000553500 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
RPGRIP1-203ENST00000553500 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
RPGRIP1-203ENST00000553500 PLPPR3Q6T4P5 718 aa16.57■□□□□ 0.24
RPGRIP1-203ENST00000553500 FOXD1Q16676 465 aa16.04■□□□□ 0.16
RPGRIP1-203ENST00000553500 PPP6R1Q9UPN7 881 aa15.6■□□□□ 0.09
RPGRIP1-203ENST00000553500 ADRA2BP18089 450 aa15.57■□□□□ 0.08
RPGRIP1-203ENST00000553500 PIAS4Q8N2W9 510 aaPredicted RBP15.16■□□□□ 0.02
RPGRIP1-203ENST00000553500 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
RPGRIP1-203ENST00000553500 MSH5O43196 834 aa14.77□□□□□ -0.05
RPGRIP1-203ENST00000553500 ABCC9O60706 1549 aa14.6□□□□□ -0.07
RPGRIP1-203ENST00000553500 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
RPGRIP1-203ENST00000553500 KCNA4P22459 653 aa14.51□□□□□ -0.09
RPGRIP1-203ENST00000553500 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
RPGRIP1-203ENST00000553500 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
RPGRIP1-203ENST00000553500 NISCHQ9Y2I1 1504 aa14.31□□□□□ -0.12
RPGRIP1-203ENST00000553500 DNAJC5Q9H3Z4 198 aa14.3□□□□□ -0.12
RPGRIP1-203ENST00000553500 CNKSR2Q8WXI2 1034 aa14.17□□□□□ -0.14
RPGRIP1-203ENST00000553500 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
RPGRIP1-203ENST00000553500 MAPK8IP2Q13387 824 aaPredicted RBP14.03□□□□□ -0.16
RPGRIP1-203ENST00000553500 DMRT2Q9Y5R5 561 aa13.92□□□□□ -0.18
RPGRIP1-203ENST00000553500 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
RPGRIP1-203ENST00000553500 RNF216Q9NWF9 866 aaPredicted RBP13.86□□□□□ -0.19
RPGRIP1-203ENST00000553500 HOXD11P31277 338 aaPredicted RBP13.75□□□□□ -0.21
RPGRIP1-203ENST00000553500 EHMT2Q96KQ7 1210 aa13.65□□□□□ -0.22
RPGRIP1-203ENST00000553500 CSRNP3Q8WYN3 585 aa13.5□□□□□ -0.25
RPGRIP1-203ENST00000553500 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
RPGRIP1-203ENST00000553500 ZBTB22O15209 634 aa13.36□□□□□ -0.27
RPGRIP1-203ENST00000553500 CCDC180Q9P1Z9 1646 aa13.35□□□□□ -0.27
RPGRIP1-203ENST00000553500 FOXD4L1Q9NU39 408 aa13.34□□□□□ -0.27
RPGRIP1-203ENST00000553500 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
RPGRIP1-203ENST00000553500 RB1CC1Q8TDY2 1594 aa13.24□□□□□ -0.29
RPGRIP1-203ENST00000553500 TRIM41Q8WV44 630 aa13.22□□□□□ -0.29
RPGRIP1-203ENST00000553500 CECR2Q9BXF3 1484 aa13.21□□□□□ -0.3
RPGRIP1-203ENST00000553500 UNC13AQ9UPW8 1703 aa13.16□□□□□ -0.3
RPGRIP1-203ENST00000553500 CC2D2AQ9P2K1 1620 aa13.13□□□□□ -0.31
RPGRIP1-203ENST00000553500 DCAF8L1A6NGE4 600 aa13.12□□□□□ -0.31
RPGRIP1-203ENST00000553500 BICRAQ9NZM4 1560 aa13.1□□□□□ -0.31
RPGRIP1-203ENST00000553500 MYCNP04198 464 aaPredicted RBP13.04□□□□□ -0.32
RPGRIP1-203ENST00000553500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.33
RPGRIP1-203ENST00000553500 POTEDQ86YR6 584 aa12.95□□□□□ -0.34
RPGRIP1-203ENST00000553500 CUX2O14529 1486 aa12.94□□□□□ -0.34
RPGRIP1-203ENST00000553500 ATXN8OSP0DMR3 200 aa12.92□□□□□ -0.34
RPGRIP1-203ENST00000553500 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
RPGRIP1-203ENST00000553500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.84□□□□□ -0.35
RPGRIP1-203ENST00000553500 HNRNPUL2Q1KMD3 747 aaKnown RBP12.84□□□□□ -0.35
RPGRIP1-203ENST00000553500 NACADO15069 1562 aa12.83□□□□□ -0.36
RPGRIP1-203ENST00000553500 SAMD1Q6SPF0 538 aaPredicted RBP12.79□□□□□ -0.36
RPGRIP1-203ENST00000553500 EIF4G1Q04637 1599 aaKnown RBP12.77□□□□□ -0.36
RPGRIP1-203ENST00000553500 RNF39Q9H2S5 420 aa12.66□□□□□ -0.38
RPGRIP1-203ENST00000553500 APLP2Q06481 763 aa12.65□□□□□ -0.38
RPGRIP1-203ENST00000553500 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
RPGRIP1-203ENST00000553500 ERCC6Q03468 1493 aa12.56□□□□□ -0.4
RPGRIP1-203ENST00000553500 C1QBPQ07021 282 aaKnown RBP12.55□□□□□ -0.4
RPGRIP1-203ENST00000553500 ILDR1Q86SU0 546 aaPredicted RBP12.52□□□□□ -0.41
RPGRIP1-203ENST00000553500 SHROOM4Q9ULL8 1493 aa12.52□□□□□ -0.41
RPGRIP1-203ENST00000553500 DCAF8L2P0C7V8 631 aa12.46□□□□□ -0.41
RPGRIP1-203ENST00000553500 ZNF219Q9P2Y4 722 aaPredicted RBP12.41□□□□□ -0.42
RPGRIP1-203ENST00000553500 THOC2Q8NI27 1593 aaKnown RBP12.38□□□□□ -0.43
RPGRIP1-203ENST00000553500 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
RPGRIP1-203ENST00000553500 CAPN15O75808 1086 aa12.29□□□□□ -0.44
RPGRIP1-203ENST00000553500 RIMBP3CA6NJZ7 1639 aa12.29□□□□□ -0.44
RPGRIP1-203ENST00000553500 RIMBP3BA6NNM3 1639 aa12.29□□□□□ -0.44
RPGRIP1-203ENST00000553500 RIMBP3Q9UFD9 1639 aa12.29□□□□□ -0.44
RPGRIP1-203ENST00000553500 NESP48681 1621 aa12.27□□□□□ -0.44
RPGRIP1-203ENST00000553500 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
RPGRIP1-203ENST00000553500 BAZ1AQ9NRL2 1556 aaPredicted RBP12.22□□□□□ -0.45
RPGRIP1-203ENST00000553500 MYO15BQ96JP2 1530 aa12.21□□□□□ -0.45
RPGRIP1-203ENST00000553500 SCRIBQ14160 1630 aa12.2□□□□□ -0.46
RPGRIP1-203ENST00000553500 POLA2Q14181 598 aa12.17□□□□□ -0.46
RPGRIP1-203ENST00000553500 SMARCA2P51531 1590 aa12.15□□□□□ -0.46
RPGRIP1-203ENST00000553500 FKBP8Q14318 412 aa12.13□□□□□ -0.47
RPGRIP1-203ENST00000553500 DSG3P32926 999 aa12.11□□□□□ -0.47
RPGRIP1-203ENST00000553500 MKRN4PQ13434 485 aaPredicted RBP12.1□□□□□ -0.47
RPGRIP1-203ENST00000553500 ZBTB12Q9Y330 459 aaPredicted RBP12.1□□□□□ -0.47
RPGRIP1-203ENST00000553500 FBLN2P98095 1184 aa12.09□□□□□ -0.47
RPGRIP1-203ENST00000553500 KIF21AQ7Z4S6 1674 aa12.06□□□□□ -0.48
RPGRIP1-203ENST00000553500 ARHGEF11O15085 1522 aa12.06□□□□□ -0.48
RPGRIP1-203ENST00000553500 ABCB7O75027 752 aa12.05□□□□□ -0.48
RPGRIP1-203ENST00000553500 CACNB1Q02641 598 aaPredicted RBP12.05□□□□□ -0.48
RPGRIP1-203ENST00000553500 OSCARQ8IYS5 282 aa12.05□□□□□ -0.48
RPGRIP1-203ENST00000553500 CYB5RLQ6IPT4 315 aa11.94□□□□□ -0.5
RPGRIP1-203ENST00000553500 SPDYE4A6NLX3 237 aa11.93□□□□□ -0.5
RPGRIP1-203ENST00000553500 ARAP1Q96P48 1450 aa11.92□□□□□ -0.5
RPGRIP1-203ENST00000553500 PROM2Q8N271 834 aa11.9□□□□□ -0.5
RPGRIP1-203ENST00000553500 NCAPD3P42695 1498 aa11.88□□□□□ -0.51
RPGRIP1-203ENST00000553500 WDR62O43379 1518 aa11.83□□□□□ -0.52
RPGRIP1-203ENST00000553500 LAMC3Q9Y6N6 1575 aa11.8□□□□□ -0.52
RPGRIP1-203ENST00000553500 MRC2Q9UBG0 1479 aa11.78□□□□□ -0.52
RPGRIP1-203ENST00000553500 SPDYE2BA6NHP3 402 aa11.77□□□□□ -0.53
RPGRIP1-203ENST00000553500 SPDYE6P0CI01 402 aa11.77□□□□□ -0.53
RPGRIP1-203ENST00000553500 SPDYE2Q495Y8 402 aa11.77□□□□□ -0.53
RPGRIP1-203ENST00000553500 LMTK3Q96Q04 1460 aa11.74□□□□□ -0.53
RPGRIP1-203ENST00000553500 FBXO3Q9UK99 471 aa11.73□□□□□ -0.53
RPGRIP1-203ENST00000553500 ATAD2BQ9ULI0 1458 aa11.73□□□□□ -0.53
RPGRIP1-203ENST00000553500 SSUH2Q9Y2M2 353 aa11.73□□□□□ -0.53
RPGRIP1-203ENST00000553500 HMGXB3Q12766 1538 aa11.71□□□□□ -0.53
RPGRIP1-203ENST00000553500 ILDR2Q71H61 639 aa11.71□□□□□ -0.53
RPGRIP1-203ENST00000553500 KDM4FA0A1W2PPD8 638 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms