RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 AEBP2Q6ZN18 517 aaPredicted RBP17.79■□□□□ 0.44
CCDC59-206ENST00000552412 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
CCDC59-206ENST00000552412 SENP3Q9H4L4 574 aaPredicted RBP15.19■□□□□ 0.02
CCDC59-206ENST00000552412 PHF23Q9BUL5 403 aaPredicted RBP15.03■□□□□ -0
CCDC59-206ENST00000552412 NISCHQ9Y2I1 1504 aa14.92□□□□□ -0.02
CCDC59-206ENST00000552412 FOXD1Q16676 465 aa14.12□□□□□ -0.15
CCDC59-206ENST00000552412 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
CCDC59-206ENST00000552412 ADRA2BP18089 450 aa13.34□□□□□ -0.27
CCDC59-206ENST00000552412 PPP6R1Q9UPN7 881 aa13.33□□□□□ -0.28
CCDC59-206ENST00000552412 PIAS4Q8N2W9 510 aaPredicted RBP13.3□□□□□ -0.28
CCDC59-206ENST00000552412 MSH5O43196 834 aa13.18□□□□□ -0.3
CCDC59-206ENST00000552412 CCDC180Q9P1Z9 1646 aa12.99□□□□□ -0.33
CCDC59-206ENST00000552412 POTEDQ86YR6 584 aa12.97□□□□□ -0.33
CCDC59-206ENST00000552412 ZCCHC6Q5VYS8 1495 aaKnown RBP12.61□□□□□ -0.39
CCDC59-206ENST00000552412 DCAF1Q9Y4B6 1507 aa12.45□□□□□ -0.42
CCDC59-206ENST00000552412 MYO15BQ96JP2 1530 aa12.23□□□□□ -0.45
CCDC59-206ENST00000552412 SCAF1Q9H7N4 1312 aaKnown RBP12.23□□□□□ -0.45
CCDC59-206ENST00000552412 MAPK8IP2Q13387 824 aaPredicted RBP12.2□□□□□ -0.46
CCDC59-206ENST00000552412 SHROOM4Q9ULL8 1493 aa12.15□□□□□ -0.46
CCDC59-206ENST00000552412 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
CCDC59-206ENST00000552412 DMRT2Q9Y5R5 561 aa12.05□□□□□ -0.48
CCDC59-206ENST00000552412 DCAF8L2P0C7V8 631 aa12.03□□□□□ -0.48
CCDC59-206ENST00000552412 NACADO15069 1562 aa12.01□□□□□ -0.49
CCDC59-206ENST00000552412 ABCC9O60706 1549 aa11.87□□□□□ -0.51
CCDC59-206ENST00000552412 SCRIBQ14160 1630 aa11.83□□□□□ -0.52
CCDC59-206ENST00000552412 RB1CC1Q8TDY2 1594 aa11.83□□□□□ -0.52
CCDC59-206ENST00000552412 SUPT5HO00267 1087 aaKnown RBP11.82□□□□□ -0.52
CCDC59-206ENST00000552412 CNKSR2Q8WXI2 1034 aa11.8□□□□□ -0.52
CCDC59-206ENST00000552412 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.53
CCDC59-206ENST00000552412 NCBP3Q53F19 620 aaKnown RBP11.7□□□□□ -0.54
CCDC59-206ENST00000552412 RSF1Q96T23 1441 aaPredicted RBP11.64□□□□□ -0.55
CCDC59-206ENST00000552412 HOXD11P31277 338 aaPredicted RBP11.64□□□□□ -0.55
CCDC59-206ENST00000552412 RNF216Q9NWF9 866 aaPredicted RBP11.63□□□□□ -0.55
CCDC59-206ENST00000552412 UNC13AQ9UPW8 1703 aa11.56□□□□□ -0.56
CCDC59-206ENST00000552412 BAZ1AQ9NRL2 1556 aaPredicted RBP11.54□□□□□ -0.56
CCDC59-206ENST00000552412 CECR2Q9BXF3 1484 aa11.49□□□□□ -0.57
CCDC59-206ENST00000552412 MROH2BQ7Z745 1585 aa11.49□□□□□ -0.57
CCDC59-206ENST00000552412 NPM3O75607 178 aaKnown RBP11.47□□□□□ -0.57
CCDC59-206ENST00000552412 SMARCA4P51532 1647 aa11.43□□□□□ -0.58
CCDC59-206ENST00000552412 BICRAQ9NZM4 1560 aa11.42□□□□□ -0.58
CCDC59-206ENST00000552412 KCNA4P22459 653 aa11.41□□□□□ -0.58
CCDC59-206ENST00000552412 WIZO95785 1651 aa11.4□□□□□ -0.58
CCDC59-206ENST00000552412 TOP2AP11388 1531 aaKnown RBP11.37□□□□□ -0.59
CCDC59-206ENST00000552412 PEG3Q9GZU2 1588 aa11.34□□□□□ -0.59
CCDC59-206ENST00000552412 EIF4G1Q04637 1599 aaKnown RBP11.28□□□□□ -0.6
CCDC59-206ENST00000552412 CACNB1Q02641 598 aaPredicted RBP11.27□□□□□ -0.61
CCDC59-206ENST00000552412 SMARCA2P51531 1590 aa11.24□□□□□ -0.61
CCDC59-206ENST00000552412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.22□□□□□ -0.614e-6■□□□□ 11.1
CCDC59-206ENST00000552412 RNF39Q9H2S5 420 aa11.22□□□□□ -0.61
CCDC59-206ENST00000552412 PABPN1Q86U42 306 aaKnown RBP eCLIP11.19□□□□□ -0.62
CCDC59-206ENST00000552412 CCDC88BA6NC98 1476 aa11.19□□□□□ -0.62
CCDC59-206ENST00000552412 TRIM41Q8WV44 630 aa11.17□□□□□ -0.62
CCDC59-206ENST00000552412 DNAJC5BQ9UF47 199 aa11.16□□□□□ -0.62
CCDC59-206ENST00000552412 ATAD2BQ9ULI0 1458 aa11.16□□□□□ -0.62
CCDC59-206ENST00000552412 BAZ1BQ9UIG0 1483 aaKnown RBP11.11□□□□□ -0.63
CCDC59-206ENST00000552412 HMGXB3Q12766 1538 aa11.1□□□□□ -0.63
CCDC59-206ENST00000552412 C1QBPQ07021 282 aaKnown RBP11.09□□□□□ -0.63
CCDC59-206ENST00000552412 NCAPD3P42695 1498 aa11.06□□□□□ -0.64
CCDC59-206ENST00000552412 EEA1Q15075 1411 aa11.03□□□□□ -0.64
CCDC59-206ENST00000552412 LOC105371045A0A1W2PR82 267 aa10.99□□□□□ -0.65
CCDC59-206ENST00000552412 ABCC8Q09428 1581 aa10.99□□□□□ -0.65
CCDC59-206ENST00000552412 WRNQ14191 1432 aaPredicted RBP eCLIP10.96□□□□□ -0.65
CCDC59-206ENST00000552412 U3KPZ7 1027 aaPredicted RBP10.91□□□□□ -0.66
CCDC59-206ENST00000552412 PRDM2Q13029 1718 aa10.9□□□□□ -0.66
CCDC59-206ENST00000552412 SLC4A2P04920 1241 aa10.89□□□□□ -0.67
CCDC59-206ENST00000552412 SYNJ1O43426 1573 aa10.89□□□□□ -0.67
CCDC59-206ENST00000552412 TOP2BQ02880 1626 aa10.88□□□□□ -0.67
CCDC59-206ENST00000552412 BIVM-ERCC5R4GMW8 1640 aa10.88□□□□□ -0.67
CCDC59-206ENST00000552412 CFTRP13569 1480 aa10.87□□□□□ -0.67
CCDC59-206ENST00000552412 FAM9AQ8IZU1 332 aaPredicted RBP10.87□□□□□ -0.67
CCDC59-206ENST00000552412 SLC4A1APQ9BWU0 796 aaKnown RBP10.84□□□□□ -0.67
CCDC59-206ENST00000552412 KIF21BO75037 1637 aa10.84□□□□□ -0.67
CCDC59-206ENST00000552412 SOGA1O94964 1423 aa10.83□□□□□ -0.68
CCDC59-206ENST00000552412 GOLGA3Q08378 1498 aa10.82□□□□□ -0.68
CCDC59-206ENST00000552412 TNIKQ9UKE5 1360 aa10.82□□□□□ -0.68
CCDC59-206ENST00000552412 TRIM26Q12899 539 aaPredicted RBP10.82□□□□□ -0.68
CCDC59-206ENST00000552412 CEP164Q9UPV0 1460 aa10.81□□□□□ -0.68
CCDC59-206ENST00000552412 CC2D2AQ9P2K1 1620 aa10.81□□□□□ -0.68
CCDC59-206ENST00000552412 CSRNP3Q8WYN3 585 aa10.81□□□□□ -0.68
CCDC59-206ENST00000552412 CAPN15O75808 1086 aa10.78□□□□□ -0.68
CCDC59-206ENST00000552412 PCGF6Q9BYE7 350 aa10.77□□□□□ -0.69
CCDC59-206ENST00000552412 CADPSQ9ULU8 1353 aa10.76□□□□□ -0.69
CCDC59-206ENST00000552412 HRCP23327 699 aa10.75□□□□□ -0.69
CCDC59-206ENST00000552412 CEP162Q5TB80 1403 aa10.75□□□□□ -0.69
CCDC59-206ENST00000552412 CUX1P39880 1505 aa10.74□□□□□ -0.69
CCDC59-206ENST00000552412 RUSC2Q8N2Y8 1516 aa10.74□□□□□ -0.69
CCDC59-206ENST00000552412 SPINK5Q9NQ38 1064 aaPredicted RBP10.74□□□□□ -0.69
CCDC59-206ENST00000552412 ERICH3Q5RHP9 1530 aa10.74□□□□□ -0.69
CCDC59-206ENST00000552412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.7□□□□□ -0.7
CCDC59-206ENST00000552412 HNRNPUL2Q1KMD3 747 aaKnown RBP10.7□□□□□ -0.7
CCDC59-206ENST00000552412 APLP2Q06481 763 aa10.69□□□□□ -0.7
CCDC59-206ENST00000552412 KIF27Q86VH2 1401 aa10.68□□□□□ -0.7
CCDC59-206ENST00000552412 PRXQ9BXM0 1461 aa10.68□□□□□ -0.7
CCDC59-206ENST00000552412 LAMC3Q9Y6N6 1575 aa10.66□□□□□ -0.7
CCDC59-206ENST00000552412 TRHP20396 242 aaPredicted RBP10.65□□□□□ -0.7
CCDC59-206ENST00000552412 UBTFP17480 764 aaKnown RBP10.64□□□□□ -0.71
CCDC59-206ENST00000552412 SAMD1Q6SPF0 538 aaPredicted RBP10.64□□□□□ -0.71
CCDC59-206ENST00000552412 FANCD2Q9BXW9 1451 aa10.63□□□□□ -0.71
CCDC59-206ENST00000552412 RAPGEF2Q9Y4G8 1499 aa10.63□□□□□ -0.71
CCDC59-206ENST00000552412 DNMBPQ6XZF7 1577 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms