RNA–Protein interactions for RNA: ENST00000551915.5

TMTC2-205, Transcript of transmembrane and tetratricopeptide repeat containing 2, humanhuman

TSL 1 (best)

Gene TMTC2, Length 3,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC2-205ENST00000551915 NISCHQ9Y2I1 1504 aa29.05■■■□□ 2.24
TMTC2-205ENST00000551915 SHROOM4Q9ULL8 1493 aa25.04■■□□□ 1.6
TMTC2-205ENST00000551915 SUPT5HO00267 1087 aaKnown RBP24.59■■□□□ 1.53
TMTC2-205ENST00000551915 CCDC180Q9P1Z9 1646 aa24.56■■□□□ 1.52
TMTC2-205ENST00000551915 ZCCHC6Q5VYS8 1495 aaKnown RBP24.55■■□□□ 1.52
TMTC2-205ENST00000551915 DCAF8L2P0C7V8 631 aa24.45■■□□□ 1.5
TMTC2-205ENST00000551915 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
TMTC2-205ENST00000551915 DCAF1Q9Y4B6 1507 aa23.72■■□□□ 1.39
TMTC2-205ENST00000551915 MYO15BQ96JP2 1530 aa23.63■■□□□ 1.37
TMTC2-205ENST00000551915 HRCP23327 699 aa23.3■■□□□ 1.32
TMTC2-205ENST00000551915 SCRIBQ14160 1630 aa23.21■■□□□ 1.31
TMTC2-205ENST00000551915 LOC105371045A0A1W2PR82 267 aa23.17■■□□□ 1.3
TMTC2-205ENST00000551915 PELP1Q8IZL8 1130 aaKnown RBP23.16■■□□□ 1.3
TMTC2-205ENST00000551915 PCGF6Q9BYE7 350 aa23.16■■□□□ 1.3
TMTC2-205ENST00000551915 ABCC9O60706 1549 aa23.14■■□□□ 1.29
TMTC2-205ENST00000551915 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
TMTC2-205ENST00000551915 TRIM41Q8WV44 630 aa22.85■■□□□ 1.25
TMTC2-205ENST00000551915 NACADO15069 1562 aa22.79■■□□□ 1.24
TMTC2-205ENST00000551915 RB1CC1Q8TDY2 1594 aa22.78■■□□□ 1.24
TMTC2-205ENST00000551915 FAM9AQ8IZU1 332 aaPredicted RBP22.77■■□□□ 1.23
TMTC2-205ENST00000551915 CECR2Q9BXF3 1484 aa22.74■■□□□ 1.23
TMTC2-205ENST00000551915 PPARGC1BQ86YN6 1023 aaKnown RBP22.69■■□□□ 1.22
TMTC2-205ENST00000551915 EHMT2Q96KQ7 1210 aa22.65■■□□□ 1.22
TMTC2-205ENST00000551915 TRIM26Q12899 539 aaPredicted RBP22.63■■□□□ 1.21
TMTC2-205ENST00000551915 MROH2BQ7Z745 1585 aa22.63■■□□□ 1.21
TMTC2-205ENST00000551915 WIZO95785 1651 aa22.48■■□□□ 1.19
TMTC2-205ENST00000551915 MYT1Q01538 1121 aa22.41■■□□□ 1.18
TMTC2-205ENST00000551915 BAZ1AQ9NRL2 1556 aaPredicted RBP22.31■■□□□ 1.16
TMTC2-205ENST00000551915 SCAF1Q9H7N4 1312 aaKnown RBP22.27■■□□□ 1.16
TMTC2-205ENST00000551915 ZEB1P37275 1124 aaPredicted RBP22.12■■□□□ 1.13
TMTC2-205ENST00000551915 PABPN1Q86U42 306 aaKnown RBP eCLIP22.11■■□□□ 1.13
TMTC2-205ENST00000551915 SMARCA4P51532 1647 aa22.1■■□□□ 1.13
TMTC2-205ENST00000551915 TOP2AP11388 1531 aaKnown RBP22.1■■□□□ 1.13
TMTC2-205ENST00000551915 CCDC88BA6NC98 1476 aa22.08■■□□□ 1.12
TMTC2-205ENST00000551915 EIF4G1Q04637 1599 aaKnown RBP22.06■■□□□ 1.12
TMTC2-205ENST00000551915 ABCC8Q09428 1581 aa22.05■■□□□ 1.12
TMTC2-205ENST00000551915 UNC13AQ9UPW8 1703 aa22■■□□□ 1.11
TMTC2-205ENST00000551915 SMARCA2P51531 1590 aa21.98■■□□□ 1.11
TMTC2-205ENST00000551915 TTBK1Q5TCY1 1321 aaPredicted RBP21.91■■□□□ 1.1
TMTC2-205ENST00000551915 SOGA1O94964 1423 aa21.88■■□□□ 1.09
TMTC2-205ENST00000551915 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
TMTC2-205ENST00000551915 UBTFP17480 764 aaKnown RBP21.81■■□□□ 1.08
TMTC2-205ENST00000551915 BICRAQ9NZM4 1560 aa21.8■■□□□ 1.08
TMTC2-205ENST00000551915 CSRNP3Q8WYN3 585 aa21.8■■□□□ 1.08
TMTC2-205ENST00000551915 CEP162Q5TB80 1403 aa21.77■■□□□ 1.08
TMTC2-205ENST00000551915 CCER1Q8TC90 406 aaPredicted RBP21.77■■□□□ 1.07
TMTC2-205ENST00000551915 RUSC2Q8N2Y8 1516 aa21.76■■□□□ 1.07
TMTC2-205ENST00000551915 TNIKQ9UKE5 1360 aa21.7■■□□□ 1.07
TMTC2-205ENST00000551915 WRNQ14191 1432 aaPredicted RBP eCLIP21.68■■□□□ 1.06
TMTC2-205ENST00000551915 EEA1Q15075 1411 aa21.68■■□□□ 1.06
TMTC2-205ENST00000551915 PEG3Q9GZU2 1588 aa21.59■■□□□ 1.05
TMTC2-205ENST00000551915 ATAD2BQ9ULI0 1458 aa21.59■■□□□ 1.05
TMTC2-205ENST00000551915 ACIN1Q9UKV3 1341 aaKnown RBP21.59■■□□□ 1.05
TMTC2-205ENST00000551915 GOLGA3Q08378 1498 aa21.58■■□□□ 1.05
TMTC2-205ENST00000551915 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
TMTC2-205ENST00000551915 SYNJ1O43426 1573 aa21.51■■□□□ 1.03
TMTC2-205ENST00000551915 RANGAP1P46060 587 aaPredicted RBP21.48■■□□□ 1.03
TMTC2-205ENST00000551915 NEUROD1Q13562 356 aa21.47■■□□□ 1.03
TMTC2-205ENST00000551915 CEP164Q9UPV0 1460 aa21.45■■□□□ 1.02
TMTC2-205ENST00000551915 CLIP1P30622 1438 aa21.39■■□□□ 1.01
TMTC2-205ENST00000551915 GTF3C3Q9Y5Q9 886 aa21.37■■□□□ 1.01
TMTC2-205ENST00000551915 HNRNPUL2Q1KMD3 747 aaKnown RBP21.35■■□□□ 1.01
TMTC2-205ENST00000551915 APLP2Q06481 763 aa21.33■■□□□ 1.01
TMTC2-205ENST00000551915 KIF21BO75037 1637 aa21.32■■□□□ 1
TMTC2-205ENST00000551915 RAPGEF2Q9Y4G8 1499 aa21.32■■□□□ 1
TMTC2-205ENST00000551915 DIEXFQ68CQ4 756 aaKnown RBP21.29■■□□□ 1
TMTC2-205ENST00000551915 VPS8Q8N3P4 1428 aa21.24■□□□□ 0.99
TMTC2-205ENST00000551915 TOP2BQ02880 1626 aa21.2■□□□□ 0.98
TMTC2-205ENST00000551915 CENPBP07199 599 aaPredicted RBP21.17■□□□□ 0.98
TMTC2-205ENST00000551915 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
TMTC2-205ENST00000551915 ZNF316A6NFI3 1004 aaPredicted RBP21.11■□□□□ 0.97
TMTC2-205ENST00000551915 HMGXB3Q12766 1538 aa21.07■□□□□ 0.96
TMTC2-205ENST00000551915 BIVM-ERCC5R4GMW8 1640 aa21.07■□□□□ 0.96
TMTC2-205ENST00000551915 CUX1P39880 1505 aa21.05■□□□□ 0.96
TMTC2-205ENST00000551915 PRXQ9BXM0 1461 aa21.04■□□□□ 0.96
TMTC2-205ENST00000551915 KIF27Q86VH2 1401 aa21.02■□□□□ 0.96
TMTC2-205ENST00000551915 ERICH3Q5RHP9 1530 aa20.99■□□□□ 0.95
TMTC2-205ENST00000551915 CFTRP13569 1480 aa20.98■□□□□ 0.95
TMTC2-205ENST00000551915 KANK4Q5T7N3 995 aaPredicted RBP20.98■□□□□ 0.95
TMTC2-205ENST00000551915 ARAP1Q96P48 1450 aa20.96■□□□□ 0.95
TMTC2-205ENST00000551915 YTHDC1Q96MU7 727 aaKnown RBP20.9■□□□□ 0.94
TMTC2-205ENST00000551915 CUX2O14529 1486 aa20.85■□□□□ 0.93
TMTC2-205ENST00000551915 BCL11AQ9H165 835 aa20.84■□□□□ 0.93
TMTC2-205ENST00000551915 ITGAEP38570 1179 aa20.83■□□□□ 0.93
TMTC2-205ENST00000551915 MIER1Q8N108 512 aa20.83■□□□□ 0.93
TMTC2-205ENST00000551915 CADPSQ9ULU8 1353 aa20.8■□□□□ 0.92
TMTC2-205ENST00000551915 ARHGAP35Q9NRY4 1499 aa20.8■□□□□ 0.92
TMTC2-205ENST00000551915 IGF1RP08069 1367 aa20.79■□□□□ 0.92
TMTC2-205ENST00000551915 DHX57Q6P158 1386 aaKnown RBP20.77■□□□□ 0.92
TMTC2-205ENST00000551915 CARMIL1Q5VZK9 1371 aa20.73■□□□□ 0.91
TMTC2-205ENST00000551915 FGD5Q6ZNL6 1462 aa20.71■□□□□ 0.91
TMTC2-205ENST00000551915 CCNB3Q8WWL7 1395 aa20.71■□□□□ 0.91
TMTC2-205ENST00000551915 RRBP1Q9P2E9 1410 aaKnown RBP20.71■□□□□ 0.91
TMTC2-205ENST00000551915 CLSPNQ9HAW4 1339 aa20.7■□□□□ 0.9
TMTC2-205ENST00000551915 P3H3Q8IVL6 736 aa20.69■□□□□ 0.9
TMTC2-205ENST00000551915 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
TMTC2-205ENST00000551915 PRDM2Q13029 1718 aa20.62■□□□□ 0.89
TMTC2-205ENST00000551915 CC2D2AQ9P2K1 1620 aa20.6■□□□□ 0.89
TMTC2-205ENST00000551915 FANCD2Q9BXW9 1451 aa20.6■□□□□ 0.89
TMTC2-205ENST00000551915 ANP32EQ9BTT0 268 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms