RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 NISCHQ9Y2I1 1504 aa26.89■■□□□ 1.89
CACNB3-219ENST00000551544 SHROOM4Q9ULL8 1493 aa23.08■■□□□ 1.29
CACNB3-219ENST00000551544 CCDC180Q9P1Z9 1646 aa22.78■■□□□ 1.24
CACNB3-219ENST00000551544 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
CACNB3-219ENST00000551544 SUPT5HO00267 1087 aaKnown RBP22.66■■□□□ 1.22
CACNB3-219ENST00000551544 DCAF8L2P0C7V8 631 aa22.48■■□□□ 1.19
CACNB3-219ENST00000551544 DCAF1Q9Y4B6 1507 aa22■■□□□ 1.11
CACNB3-219ENST00000551544 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
CACNB3-219ENST00000551544 MYO15BQ96JP2 1530 aa21.87■■□□□ 1.09
CACNB3-219ENST00000551544 SCRIBQ14160 1630 aa21.46■■□□□ 1.03
CACNB3-219ENST00000551544 ABCC9O60706 1549 aa21.44■■□□□ 1.02
CACNB3-219ENST00000551544 LOC105371045A0A1W2PR82 267 aa21.37■■□□□ 1.01
CACNB3-219ENST00000551544 PCGF6Q9BYE7 350 aa21.37■■□□□ 1.01
CACNB3-219ENST00000551544 HRCP23327 699 aa21.34■■□□□ 1.01
CACNB3-219ENST00000551544 RSF1Q96T23 1441 aaPredicted RBP21.31■■□□□ 1
CACNB3-219ENST00000551544 NACADO15069 1562 aa21.1■□□□□ 0.97
CACNB3-219ENST00000551544 RB1CC1Q8TDY2 1594 aa21.08■□□□□ 0.97
CACNB3-219ENST00000551544 TRIM41Q8WV44 630 aa21.07■□□□□ 0.96
CACNB3-219ENST00000551544 CECR2Q9BXF3 1484 aa21.02■□□□□ 0.95
CACNB3-219ENST00000551544 FAM9AQ8IZU1 332 aaPredicted RBP20.96■□□□□ 0.95
CACNB3-219ENST00000551544 PPARGC1BQ86YN6 1023 aaKnown RBP20.95■□□□□ 0.94
CACNB3-219ENST00000551544 MROH2BQ7Z745 1585 aa20.93■□□□□ 0.94
CACNB3-219ENST00000551544 TRIM26Q12899 539 aaPredicted RBP20.91■□□□□ 0.94
CACNB3-219ENST00000551544 EHMT2Q96KQ7 1210 aa20.82■□□□□ 0.92
CACNB3-219ENST00000551544 WIZO95785 1651 aa20.81■□□□□ 0.92
CACNB3-219ENST00000551544 BAZ1AQ9NRL2 1556 aaPredicted RBP20.64■□□□□ 0.9
CACNB3-219ENST00000551544 EIF4G1Q04637 1599 aaKnown RBP20.47■□□□□ 0.87
CACNB3-219ENST00000551544 SMARCA4P51532 1647 aa20.46■□□□□ 0.87
CACNB3-219ENST00000551544 TOP2AP11388 1531 aaKnown RBP20.46■□□□□ 0.87
CACNB3-219ENST00000551544 ZEB1P37275 1124 aaPredicted RBP20.45■□□□□ 0.86
CACNB3-219ENST00000551544 UNC13AQ9UPW8 1703 aa20.42■□□□□ 0.86
CACNB3-219ENST00000551544 CCDC88BA6NC98 1476 aa20.42■□□□□ 0.86
CACNB3-219ENST00000551544 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
CACNB3-219ENST00000551544 PABPN1Q86U42 306 aaKnown RBP eCLIP20.35■□□□□ 0.85
CACNB3-219ENST00000551544 SMARCA2P51531 1590 aa20.35■□□□□ 0.85
CACNB3-219ENST00000551544 SOGA1O94964 1423 aa20.22■□□□□ 0.83
CACNB3-219ENST00000551544 BICRAQ9NZM4 1560 aa20.19■□□□□ 0.82
CACNB3-219ENST00000551544 TTBK1Q5TCY1 1321 aaPredicted RBP20.15■□□□□ 0.82
CACNB3-219ENST00000551544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
CACNB3-219ENST00000551544 CEP162Q5TB80 1403 aa20.12■□□□□ 0.81
CACNB3-219ENST00000551544 CSRNP3Q8WYN3 585 aa20.12■□□□□ 0.81
CACNB3-219ENST00000551544 RUSC2Q8N2Y8 1516 aa20.11■□□□□ 0.81
CACNB3-219ENST00000551544 UBTFP17480 764 aaKnown RBP20.1■□□□□ 0.81
CACNB3-219ENST00000551544 CCER1Q8TC90 406 aaPredicted RBP20.08■□□□□ 0.8
CACNB3-219ENST00000551544 TNIKQ9UKE5 1360 aa20.07■□□□□ 0.8
CACNB3-219ENST00000551544 EEA1Q15075 1411 aa20.06■□□□□ 0.8
CACNB3-219ENST00000551544 WRNQ14191 1432 aaPredicted RBP eCLIP20.05■□□□□ 0.8
CACNB3-219ENST00000551544 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
CACNB3-219ENST00000551544 PEG3Q9GZU2 1588 aa20.02■□□□□ 0.8
CACNB3-219ENST00000551544 GOLGA3Q08378 1498 aa19.96■□□□□ 0.79
CACNB3-219ENST00000551544 ATAD2BQ9ULI0 1458 aa19.96■□□□□ 0.79
CACNB3-219ENST00000551544 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
CACNB3-219ENST00000551544 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
CACNB3-219ENST00000551544 CEP164Q9UPV0 1460 aa19.83■□□□□ 0.77
CACNB3-219ENST00000551544 KIF21BO75037 1637 aa19.76■□□□□ 0.75
CACNB3-219ENST00000551544 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
CACNB3-219ENST00000551544 CLIP1P30622 1438 aa19.75■□□□□ 0.75
CACNB3-219ENST00000551544 RANGAP1P46060 587 aaPredicted RBP19.75■□□□□ 0.75
CACNB3-219ENST00000551544 RAPGEF2Q9Y4G8 1499 aa19.71■□□□□ 0.75
CACNB3-219ENST00000551544 HNRNPUL2Q1KMD3 747 aaKnown RBP19.67■□□□□ 0.74
CACNB3-219ENST00000551544 DIEXFQ68CQ4 756 aaKnown RBP19.67■□□□□ 0.74
CACNB3-219ENST00000551544 APLP2Q06481 763 aa19.66■□□□□ 0.74
CACNB3-219ENST00000551544 VPS8Q8N3P4 1428 aa19.65■□□□□ 0.74
CACNB3-219ENST00000551544 TOP2BQ02880 1626 aa19.64■□□□□ 0.73
CACNB3-219ENST00000551544 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
CACNB3-219ENST00000551544 BIVM-ERCC5R4GMW8 1640 aa19.54■□□□□ 0.72
CACNB3-219ENST00000551544 HMGXB3Q12766 1538 aa19.51■□□□□ 0.71
CACNB3-219ENST00000551544 ZNF316A6NFI3 1004 aaPredicted RBP19.5■□□□□ 0.71
CACNB3-219ENST00000551544 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
CACNB3-219ENST00000551544 NEUROD1Q13562 356 aa19.48■□□□□ 0.71
CACNB3-219ENST00000551544 PRXQ9BXM0 1461 aa19.48■□□□□ 0.71
CACNB3-219ENST00000551544 CUX1P39880 1505 aa19.47■□□□□ 0.71
CACNB3-219ENST00000551544 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
CACNB3-219ENST00000551544 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
CACNB3-219ENST00000551544 CFTRP13569 1480 aa19.41■□□□□ 0.7
CACNB3-219ENST00000551544 CENPBP07199 599 aaPredicted RBP19.4■□□□□ 0.7
CACNB3-219ENST00000551544 ARAP1Q96P48 1450 aa19.4■□□□□ 0.7
CACNB3-219ENST00000551544 KANK4Q5T7N3 995 aaPredicted RBP19.37■□□□□ 0.69
CACNB3-219ENST00000551544 GTF3C3Q9Y5Q9 886 aa19.29■□□□□ 0.68
CACNB3-219ENST00000551544 YTHDC1Q96MU7 727 aaKnown RBP19.26■□□□□ 0.67
CACNB3-219ENST00000551544 MIER1Q8N108 512 aa19.24■□□□□ 0.67
CACNB3-219ENST00000551544 CUX2O14529 1486 aa19.24■□□□□ 0.67
CACNB3-219ENST00000551544 ARHGAP35Q9NRY4 1499 aa19.24■□□□□ 0.67
CACNB3-219ENST00000551544 CADPSQ9ULU8 1353 aa19.21■□□□□ 0.67
CACNB3-219ENST00000551544 DHX57Q6P158 1386 aaKnown RBP19.21■□□□□ 0.67
CACNB3-219ENST00000551544 MYT1Q01538 1121 aa19.21■□□□□ 0.67
CACNB3-219ENST00000551544 IGF1RP08069 1367 aa19.21■□□□□ 0.66
CACNB3-219ENST00000551544 RRBP1Q9P2E9 1410 aaKnown RBP19.17■□□□□ 0.66
CACNB3-219ENST00000551544 ITGAEP38570 1179 aa19.17■□□□□ 0.66
CACNB3-219ENST00000551544 PRDM2Q13029 1718 aa19.16■□□□□ 0.66
CACNB3-219ENST00000551544 CLSPNQ9HAW4 1339 aa19.16■□□□□ 0.66
CACNB3-219ENST00000551544 FGD5Q6ZNL6 1462 aa19.14■□□□□ 0.66
CACNB3-219ENST00000551544 CARMIL1Q5VZK9 1371 aa19.14■□□□□ 0.65
CACNB3-219ENST00000551544 CCNB3Q8WWL7 1395 aa19.14■□□□□ 0.65
CACNB3-219ENST00000551544 CC2D2AQ9P2K1 1620 aa19.05■□□□□ 0.64
CACNB3-219ENST00000551544 P3H3Q8IVL6 736 aa19.05■□□□□ 0.64
CACNB3-219ENST00000551544 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
CACNB3-219ENST00000551544 ATP1B4Q9UN42 357 aaPredicted RBP19.02■□□□□ 0.64
CACNB3-219ENST00000551544 TIAM1Q13009 1591 aa19.01■□□□□ 0.63
CACNB3-219ENST00000551544 RAB3GAP2Q9H2M9 1393 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms