RNA–Protein interactions for RNA: ENST00000548387.1

ACSS3-205, Transcript of acyl-CoA synthetase short chain family member 3, humanhuman

TSL 2

Gene ACSS3, Length 741 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3-205ENST00000548387 CHIC1Q5VXU3 224 aa21.1■□□□□ 0.97
ACSS3-205ENST00000548387 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
ACSS3-205ENST00000548387 NISCHQ9Y2I1 1504 aa20■□□□□ 0.79
ACSS3-205ENST00000548387 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
ACSS3-205ENST00000548387 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
ACSS3-205ENST00000548387 ABCC9O60706 1549 aa17.81■□□□□ 0.44
ACSS3-205ENST00000548387 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
ACSS3-205ENST00000548387 EHMT2Q96KQ7 1210 aa17.44■□□□□ 0.38
ACSS3-205ENST00000548387 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.32
ACSS3-205ENST00000548387 KCNA4P22459 653 aa16.99■□□□□ 0.31
ACSS3-205ENST00000548387 NACADO15069 1562 aa16.95■□□□□ 0.3
ACSS3-205ENST00000548387 SENP3Q9H4L4 574 aaPredicted RBP16.89■□□□□ 0.29
ACSS3-205ENST00000548387 MYO15BQ96JP2 1530 aa16.78■□□□□ 0.28
ACSS3-205ENST00000548387 DCAF8L2P0C7V8 631 aa16.76■□□□□ 0.27
ACSS3-205ENST00000548387 SLC24A1O60721 1099 aa16.71■□□□□ 0.27
ACSS3-205ENST00000548387 CSRNP3Q8WYN3 585 aa16.69■□□□□ 0.26
ACSS3-205ENST00000548387 DNAJC5BQ9UF47 199 aa16.66■□□□□ 0.26
ACSS3-205ENST00000548387 UNC13AQ9UPW8 1703 aa16.62■□□□□ 0.25
ACSS3-205ENST00000548387 ADRA2BP18089 450 aa16.61■□□□□ 0.25
ACSS3-205ENST00000548387 ZCCHC6Q5VYS8 1495 aaKnown RBP16.6■□□□□ 0.25
ACSS3-205ENST00000548387 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
ACSS3-205ENST00000548387 DCAF1Q9Y4B6 1507 aa16.57■□□□□ 0.24
ACSS3-205ENST00000548387 BICRAQ9NZM4 1560 aa16.52■□□□□ 0.24
ACSS3-205ENST00000548387 SHROOM4Q9ULL8 1493 aa16.37■□□□□ 0.21
ACSS3-205ENST00000548387 SLC4A1APQ9BWU0 796 aaKnown RBP16.34■□□□□ 0.21
ACSS3-205ENST00000548387 SCRIBQ14160 1630 aa16.29■□□□□ 0.2
ACSS3-205ENST00000548387 CC2D2AQ9P2K1 1620 aa16.12■□□□□ 0.17
ACSS3-205ENST00000548387 PPP6R1Q9UPN7 881 aa16.11■□□□□ 0.17
ACSS3-205ENST00000548387 EIF4G1Q04637 1599 aaKnown RBP16.11■□□□□ 0.17
ACSS3-205ENST00000548387 RTN4Q9NQC3 1192 aaKnown RBP16.07■□□□□ 0.16
ACSS3-205ENST00000548387 CECR2Q9BXF3 1484 aa16.06■□□□□ 0.16
ACSS3-205ENST00000548387 AMER1Q5JTC6 1135 aaPredicted RBP15.94■□□□□ 0.14
ACSS3-205ENST00000548387 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
ACSS3-205ENST00000548387 ZBTB22O15209 634 aa15.75■□□□□ 0.11
ACSS3-205ENST00000548387 NCAPD3P42695 1498 aa15.65■□□□□ 0.1
ACSS3-205ENST00000548387 NCBP3Q53F19 620 aaKnown RBP15.62■□□□□ 0.09
ACSS3-205ENST00000548387 FOXD1Q16676 465 aa15.61■□□□□ 0.09
ACSS3-205ENST00000548387 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
ACSS3-205ENST00000548387 SMARCA4P51532 1647 aa15.58■□□□□ 0.09
ACSS3-205ENST00000548387 NPM3O75607 178 aaKnown RBP15.56■□□□□ 0.08
ACSS3-205ENST00000548387 SMARCA2P51531 1590 aa15.55■□□□□ 0.08
ACSS3-205ENST00000548387 HMGXB3Q12766 1538 aa15.53■□□□□ 0.08
ACSS3-205ENST00000548387 BAZ1AQ9NRL2 1556 aaPredicted RBP15.53■□□□□ 0.08
ACSS3-205ENST00000548387 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
ACSS3-205ENST00000548387 BAZ1BQ9UIG0 1483 aaKnown RBP15.42■□□□□ 0.06
ACSS3-205ENST00000548387 MROH2BQ7Z745 1585 aa15.39■□□□□ 0.05
ACSS3-205ENST00000548387 CUX2O14529 1486 aa15.39■□□□□ 0.05
ACSS3-205ENST00000548387 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
ACSS3-205ENST00000548387 NESP48681 1621 aa15.32■□□□□ 0.04
ACSS3-205ENST00000548387 DNAJC5Q9H3Z4 198 aa15.28■□□□□ 0.04
ACSS3-205ENST00000548387 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
ACSS3-205ENST00000548387 WIZO95785 1651 aa15.2■□□□□ 0.02
ACSS3-205ENST00000548387 THOC2Q8NI27 1593 aaKnown RBP15.19■□□□□ 0.02
ACSS3-205ENST00000548387 FOXD4L1Q9NU39 408 aa15.18■□□□□ 0.02
ACSS3-205ENST00000548387 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
ACSS3-205ENST00000548387 CADPSQ9ULU8 1353 aa15.15■□□□□ 0.02
ACSS3-205ENST00000548387 KIF21AQ7Z4S6 1674 aa15.12■□□□□ 0.01
ACSS3-205ENST00000548387 RSF1Q96T23 1441 aaPredicted RBP15.1■□□□□ 0.01
ACSS3-205ENST00000548387 TOP2AP11388 1531 aaKnown RBP15.04■□□□□ -0
ACSS3-205ENST00000548387 MRC2Q9UBG0 1479 aa15.03■□□□□ -0
ACSS3-205ENST00000548387 WDR62O43379 1518 aa15.01□□□□□ -0.01
ACSS3-205ENST00000548387 CFTRP13569 1480 aa15.01□□□□□ -0.01
ACSS3-205ENST00000548387 CNKSR2Q8WXI2 1034 aa14.99□□□□□ -0.01
ACSS3-205ENST00000548387 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
ACSS3-205ENST00000548387 FANCD2Q9BXW9 1451 aa14.97□□□□□ -0.01
ACSS3-205ENST00000548387 PIAS4Q8N2W9 510 aaPredicted RBP14.96□□□□□ -0.01
ACSS3-205ENST00000548387 FKBP8Q14318 412 aa14.92□□□□□ -0.02
ACSS3-205ENST00000548387 POTEDQ86YR6 584 aa14.89□□□□□ -0.03
ACSS3-205ENST00000548387 CCDC88BA6NC98 1476 aa14.86□□□□□ -0.03
ACSS3-205ENST00000548387 PRDM2Q13029 1718 aa14.85□□□□□ -0.03
ACSS3-205ENST00000548387 URB2Q14146 1524 aaKnown RBP14.84□□□□□ -0.03
ACSS3-205ENST00000548387 ABCC8Q09428 1581 aa14.7□□□□□ -0.06
ACSS3-205ENST00000548387 TOPBP1Q92547 1522 aa14.7□□□□□ -0.06
ACSS3-205ENST00000548387 IFT140Q96RY7 1462 aa14.69□□□□□ -0.06
ACSS3-205ENST00000548387 PRKCSHP14314 528 aaPredicted RBP14.68□□□□□ -0.06
ACSS3-205ENST00000548387 PLCB2Q00722 1185 aa14.67□□□□□ -0.06
ACSS3-205ENST00000548387 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
ACSS3-205ENST00000548387 DNMBPQ6XZF7 1577 aa14.65□□□□□ -0.06
ACSS3-205ENST00000548387 ZNF608Q9ULD9 1512 aaPredicted RBP14.63□□□□□ -0.07
ACSS3-205ENST00000548387 TARBP1Q13395 1621 aaKnown RBP14.57□□□□□ -0.08
ACSS3-205ENST00000548387 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
ACSS3-205ENST00000548387 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
ACSS3-205ENST00000548387 TRIM41Q8WV44 630 aa14.56□□□□□ -0.08
ACSS3-205ENST00000548387 POLA1P09884 1462 aaPredicted RBP14.55□□□□□ -0.08
ACSS3-205ENST00000548387 BCANQ96GW7 911 aa14.53□□□□□ -0.08
ACSS3-205ENST00000548387 TAOK2Q9UL54 1235 aa14.52□□□□□ -0.09
ACSS3-205ENST00000548387 ATXN8OSP0DMR3 200 aa14.51□□□□□ -0.09
ACSS3-205ENST00000548387 AQRO60306 1485 aaKnown RBP eCLIP14.5□□□□□ -0.09
ACSS3-205ENST00000548387 SOGA1O94964 1423 aa14.49□□□□□ -0.09
ACSS3-205ENST00000548387 RAD54L2Q9Y4B4 1467 aa14.47□□□□□ -0.09
ACSS3-205ENST00000548387 WDR97A6NE52 1622 aa14.47□□□□□ -0.09
ACSS3-205ENST00000548387 FGD5Q6ZNL6 1462 aa14.46□□□□□ -0.09
ACSS3-205ENST00000548387 CUX1P39880 1505 aa14.46□□□□□ -0.1
ACSS3-205ENST00000548387 RIMBP3CA6NJZ7 1639 aa14.45□□□□□ -0.1
ACSS3-205ENST00000548387 RIMBP3BA6NNM3 1639 aa14.45□□□□□ -0.1
ACSS3-205ENST00000548387 RIMBP3Q9UFD9 1639 aa14.45□□□□□ -0.1
ACSS3-205ENST00000548387 CHD1O14646 1710 aa14.43□□□□□ -0.1
ACSS3-205ENST00000548387 ARHGEF11O15085 1522 aa14.42□□□□□ -0.1
ACSS3-205ENST00000548387 TDRD9Q8NDG6 1382 aaKnown RBP14.42□□□□□ -0.1
ACSS3-205ENST00000548387 SUPT5HO00267 1087 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms