RNA–Protein interactions for RNA: ENST00000547046.5

SYT1-205, Transcript of synaptotagmin 1, humanhuman

TSL 5

Gene SYT1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-205ENST00000547046 AEBP2Q6ZN18 517 aaPredicted RBP25.41■■□□□ 1.66
SYT1-205ENST00000547046 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
SYT1-205ENST00000547046 PHF23Q9BUL5 403 aaPredicted RBP21.88■■□□□ 1.09
SYT1-205ENST00000547046 SENP3Q9H4L4 574 aaPredicted RBP21.54■■□□□ 1.04
SYT1-205ENST00000547046 NISCHQ9Y2I1 1504 aa20.63■□□□□ 0.89
SYT1-205ENST00000547046 PLPPR3Q6T4P5 718 aa20.22■□□□□ 0.83
SYT1-205ENST00000547046 FOXD1Q16676 465 aa19.99■□□□□ 0.79
SYT1-205ENST00000547046 ADRA2BP18089 450 aa19.3■□□□□ 0.68
SYT1-205ENST00000547046 PPP6R1Q9UPN7 881 aa19.3■□□□□ 0.68
SYT1-205ENST00000547046 PIAS4Q8N2W9 510 aaPredicted RBP18.89■□□□□ 0.61
SYT1-205ENST00000547046 POTEDQ86YR6 584 aa18.86■□□□□ 0.61
SYT1-205ENST00000547046 ABCC9O60706 1549 aa18.44■□□□□ 0.54
SYT1-205ENST00000547046 CCDC180Q9P1Z9 1646 aa18.41■□□□□ 0.54
SYT1-205ENST00000547046 MSH5O43196 834 aa18.4■□□□□ 0.54
SYT1-205ENST00000547046 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
SYT1-205ENST00000547046 PPP4R3CPQ6ZMV5 832 aa17.84■□□□□ 0.45
SYT1-205ENST00000547046 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
SYT1-205ENST00000547046 KCNA4P22459 653 aa17.51■□□□□ 0.39
SYT1-205ENST00000547046 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
SYT1-205ENST00000547046 DCAF8L2P0C7V8 631 aa17.47■□□□□ 0.39
SYT1-205ENST00000547046 RB1CC1Q8TDY2 1594 aa17.42■□□□□ 0.38
SYT1-205ENST00000547046 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
SYT1-205ENST00000547046 NACADO15069 1562 aa17.34■□□□□ 0.37
SYT1-205ENST00000547046 CNKSR2Q8WXI2 1034 aa17.31■□□□□ 0.36
SYT1-205ENST00000547046 DNAJC5Q9H3Z4 198 aa17.3■□□□□ 0.36
SYT1-205ENST00000547046 DMRT2Q9Y5R5 561 aa17.2■□□□□ 0.34
SYT1-205ENST00000547046 MYO15BQ96JP2 1530 aa17.15■□□□□ 0.34
SYT1-205ENST00000547046 NPM3O75607 178 aaKnown RBP17.14■□□□□ 0.33
SYT1-205ENST00000547046 ZCCHC6Q5VYS8 1495 aaKnown RBP17.13■□□□□ 0.33
SYT1-205ENST00000547046 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
SYT1-205ENST00000547046 DCAF1Q9Y4B6 1507 aa17.04■□□□□ 0.32
SYT1-205ENST00000547046 UNC13AQ9UPW8 1703 aa17.03■□□□□ 0.32
SYT1-205ENST00000547046 RNF216Q9NWF9 866 aaPredicted RBP16.95■□□□□ 0.3
SYT1-205ENST00000547046 HOXD11P31277 338 aaPredicted RBP16.86■□□□□ 0.29
SYT1-205ENST00000547046 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
SYT1-205ENST00000547046 BICRAQ9NZM4 1560 aa16.82■□□□□ 0.28
SYT1-205ENST00000547046 SLC4A1APQ9BWU0 796 aaKnown RBP16.69■□□□□ 0.26
SYT1-205ENST00000547046 CECR2Q9BXF3 1484 aa16.65■□□□□ 0.26
SYT1-205ENST00000547046 SHROOM4Q9ULL8 1493 aa16.63■□□□□ 0.25
SYT1-205ENST00000547046 CC2D2AQ9P2K1 1620 aa16.59■□□□□ 0.25
SYT1-205ENST00000547046 DCAF8L1A6NGE4 600 aa16.52■□□□□ 0.24
SYT1-205ENST00000547046 EIF4G1Q04637 1599 aaKnown RBP16.43■□□□□ 0.22
SYT1-205ENST00000547046 EHMT2Q96KQ7 1210 aa16.33■□□□□ 0.2
SYT1-205ENST00000547046 TRIM41Q8WV44 630 aa16.21■□□□□ 0.19
SYT1-205ENST00000547046 CUX2O14529 1486 aa16.16■□□□□ 0.18
SYT1-205ENST00000547046 SLC4A2P04920 1241 aa16.16■□□□□ 0.18
SYT1-205ENST00000547046 ZBTB22O15209 634 aa16.12■□□□□ 0.17
SYT1-205ENST00000547046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.17
SYT1-205ENST00000547046 FOXD4L1Q9NU39 408 aa16.08■□□□□ 0.16
SYT1-205ENST00000547046 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
SYT1-205ENST00000547046 SMARCA4P51532 1647 aa16.05■□□□□ 0.16
SYT1-205ENST00000547046 BAZ1AQ9NRL2 1556 aaPredicted RBP16.03■□□□□ 0.16
SYT1-205ENST00000547046 CACNB1Q02641 598 aaPredicted RBP15.99■□□□□ 0.15
SYT1-205ENST00000547046 SMARCA2P51531 1590 aa15.98■□□□□ 0.15
SYT1-205ENST00000547046 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
SYT1-205ENST00000547046 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
SYT1-205ENST00000547046 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
SYT1-205ENST00000547046 MROH2BQ7Z745 1585 aa15.9■□□□□ 0.14
SYT1-205ENST00000547046 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
SYT1-205ENST00000547046 BAZ1BQ9UIG0 1483 aaKnown RBP15.88■□□□□ 0.13
SYT1-205ENST00000547046 PEG3Q9GZU2 1588 aa15.85■□□□□ 0.13
SYT1-205ENST00000547046 U3KPZ7 1027 aaPredicted RBP15.84■□□□□ 0.13
SYT1-205ENST00000547046 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.12
SYT1-205ENST00000547046 RNF39Q9H2S5 420 aa15.78■□□□□ 0.12
SYT1-205ENST00000547046 WIZO95785 1651 aa15.77■□□□□ 0.12
SYT1-205ENST00000547046 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
SYT1-205ENST00000547046 NESP48681 1621 aa15.66■□□□□ 0.1
SYT1-205ENST00000547046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.64■□□□□ 0.09
SYT1-205ENST00000547046 HNRNPUL2Q1KMD3 747 aaKnown RBP15.64■□□□□ 0.09
SYT1-205ENST00000547046 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
SYT1-205ENST00000547046 SAMD1Q6SPF0 538 aaPredicted RBP15.6■□□□□ 0.09
SYT1-205ENST00000547046 C1QBPQ07021 282 aaKnown RBP15.58■□□□□ 0.08
SYT1-205ENST00000547046 THOC2Q8NI27 1593 aaKnown RBP15.57■□□□□ 0.08
SYT1-205ENST00000547046 TOP2AP11388 1531 aaKnown RBP15.56■□□□□ 0.08
SYT1-205ENST00000547046 CADPSQ9ULU8 1353 aa15.54■□□□□ 0.08
SYT1-205ENST00000547046 PDS5BQ9NTI5 1447 aa15.53■□□□□ 0.08
SYT1-205ENST00000547046 KIF21AQ7Z4S6 1674 aa15.5■□□□□ 0.07
SYT1-205ENST00000547046 ATXN8OSP0DMR3 200 aa15.49■□□□□ 0.07
SYT1-205ENST00000547046 APLP2Q06481 763 aa15.47■□□□□ 0.07
SYT1-205ENST00000547046 ATF5Q9Y2D1 282 aaPredicted RBP15.42■□□□□ 0.06
SYT1-205ENST00000547046 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
SYT1-205ENST00000547046 CCDC88BA6NC98 1476 aa15.39■□□□□ 0.05
SYT1-205ENST00000547046 CFTRP13569 1480 aa15.39■□□□□ 0.05
SYT1-205ENST00000547046 CEP164Q9UPV0 1460 aa15.37■□□□□ 0.05
SYT1-205ENST00000547046 FANCD2Q9BXW9 1451 aa15.36■□□□□ 0.05
SYT1-205ENST00000547046 MRC2Q9UBG0 1479 aa15.35■□□□□ 0.05
SYT1-205ENST00000547046 CAPN15O75808 1086 aa15.34■□□□□ 0.05
SYT1-205ENST00000547046 PRDM2Q13029 1718 aa15.34■□□□□ 0.05
SYT1-205ENST00000547046 SUPT5HO00267 1087 aaKnown RBP15.33■□□□□ 0.04
SYT1-205ENST00000547046 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
SYT1-205ENST00000547046 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
SYT1-205ENST00000547046 RIMBP3CA6NJZ7 1639 aa15.28■□□□□ 0.04
SYT1-205ENST00000547046 RIMBP3BA6NNM3 1639 aa15.28■□□□□ 0.04
SYT1-205ENST00000547046 RIMBP3Q9UFD9 1639 aa15.28■□□□□ 0.04
SYT1-205ENST00000547046 WDR62O43379 1518 aa15.27■□□□□ 0.04
SYT1-205ENST00000547046 ZNF219Q9P2Y4 722 aaPredicted RBP15.26■□□□□ 0.03
SYT1-205ENST00000547046 URB2Q14146 1524 aaKnown RBP15.19■□□□□ 0.02
SYT1-205ENST00000547046 ABCC8Q09428 1581 aa15.12■□□□□ 0.01
SYT1-205ENST00000547046 ARHGEF11O15085 1522 aa15.09■□□□□ 0.01
SYT1-205ENST00000547046 TOPBP1Q92547 1522 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms